Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0827:02488
Extra
PDB:
ATOM 1 O3' C A 826 63.158 143.674 91.012 1.00 28.92 O
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' G B2487 64.535 141.503 95.221 1.00 25.72 O
ATOM 2 P C B2488 63.413 142.195 96.132 1.00 29.01 P
ATOM 3 OP1 C B2488 63.471 143.644 95.827 1.00 26.75 O
ATOM 4 OP2 C B2488 63.579 141.729 97.530 1.00 28.06 O
ATOM 5 O5' C B2488 62.047 141.590 95.587 1.00 26.43 O
ATOM 6 C5' C B2488 61.453 142.090 94.384 1.00 28.67 C
ATOM 7 C4' C B2488 60.021 141.639 94.292 1.00 29.08 C
ATOM 8 O4' C B2488 59.982 140.193 94.241 1.00 29.01 O
ATOM 9 C3' C B2488 59.156 141.976 95.490 1.00 28.69 C
ATOM 10 O3' C B2488 58.655 143.299 95.418 1.00 30.05 O
ATOM 11 C2' C B2488 58.046 140.951 95.375 1.00 27.34 C
ATOM 12 O2' C B2488 57.110 141.301 94.379 1.00 27.40 O
ATOM 13 C1' C B2488 58.831 139.728 94.912 1.00 27.94 C
ATOM 14 N1 C B2488 59.255 138.848 96.014 1.00 33.05 N
ATOM 15 C2 C B2488 58.310 137.992 96.580 1.00 34.00 C
ATOM 16 O2 C B2488 57.136 138.037 96.167 1.00 37.10 O
ATOM 17 N3 C B2488 58.691 137.141 97.559 1.00 32.80 N
ATOM 18 C4 C B2488 59.954 137.125 97.974 1.00 31.06 C
ATOM 19 N4 C B2488 60.289 136.235 98.908 1.00 29.72 N
ATOM 20 C5 C B2488 60.934 138.011 97.440 1.00 30.34 C
ATOM 21 C6 C B2488 60.547 138.849 96.472 1.00 32.19 C
ATOM 22 P U B2489 58.709 144.236 96.714 1.00 31.08 P
ATOM 23 OP1 U B2489 59.599 145.376 96.376 1.00 31.27 O
ATOM 24 OP2 U B2489 59.006 143.393 97.908 1.00 32.05 O
ATOM 25 O5' U B2489 57.230 144.791 96.843 1.00 28.19 O
TER
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' G B2487 64.535 141.503 95.221 1.00 25.72 O
ATOM 2 P C B2488 63.413 142.195 96.132 1.00 29.01 P
ATOM 3 OP1 C B2488 63.471 143.644 95.827 1.00 26.75 O
ATOM 4 OP2 C B2488 63.579 141.729 97.530 1.00 28.06 O
ATOM 5 O5' C B2488 62.047 141.590 95.587 1.00 26.43 O
ATOM 6 C5' C B2488 61.453 142.090 94.384 1.00 28.67 C
ATOM 7 C4' C B2488 60.021 141.639 94.292 1.00 29.08 C
ATOM 8 O4' C B2488 59.982 140.193 94.241 1.00 29.01 O
ATOM 9 C3' C B2488 59.156 141.976 95.490 1.00 28.69 C
ATOM 10 O3' C B2488 58.655 143.299 95.418 1.00 30.05 O
ATOM 11 C2' C B2488 58.046 140.951 95.375 1.00 27.34 C
ATOM 12 O2' C B2488 57.110 141.301 94.379 1.00 27.40 O
ATOM 13 C1' C B2488 58.831 139.728 94.912 1.00 27.94 C
ATOM 14 N1 C B2488 59.255 138.848 96.014 1.00 33.05 N
ATOM 15 C2 C B2488 58.310 137.992 96.580 1.00 34.00 C
ATOM 16 O2 C B2488 57.136 138.037 96.167 1.00 37.10 O
ATOM 17 N3 C B2488 58.691 137.141 97.559 1.00 32.80 N
ATOM 18 C4 C B2488 59.954 137.125 97.974 1.00 31.06 C
ATOM 19 N4 C B2488 60.289 136.235 98.908 1.00 29.72 N
ATOM 20 C5 C B2488 60.934 138.011 97.440 1.00 30.34 C
ATOM 21 C6 C B2488 60.547 138.849 96.472 1.00 32.19 C
ATOM 22 P U B2489 58.709 144.236 96.714 1.00 31.08 P
ATOM 23 OP1 U B2489 59.599 145.376 96.376 1.00 31.27 O
ATOM 24 OP2 U B2489 59.006 143.393 97.908 1.00 32.05 O
ATOM 25 O5' U B2489 57.230 144.791 96.843 1.00 28.19 O
TER
Atoms:
C4: (55.525,143.668,91.230)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
C2: (58.310,137.992,96.580)
OP1: (63.471,143.644,95.827)
OP2: (63.579,141.729,97.530)
C4: (59.954,137.125,97.974)
O5': (62.047,141.590,95.587)
C3': (59.156,141.976,95.490)
C1': (58.831,139.728,94.912)
O4': (59.982,140.193,94.241)
C5': (61.453,142.090,94.384)
P: (63.413,142.195,96.132)
O2: (57.136,138.037,96.167)
C4': (60.021,141.639,94.292)
C2': (58.046,140.951,95.375)
O2': (57.110,141.301,94.379)
N1: (59.255,138.848,96.014)
N3: (58.691,137.141,97.559)
N4: (60.289,136.235,98.908)
C6: (60.547,138.849,96.472)
C5: (60.934,138.011,97.440)
O3': (58.655,143.299,95.418)
OP1: (63.471,143.644,95.827)
OP2: (63.579,141.729,97.530)
C4: (59.954,137.125,97.974)
O5': (62.047,141.590,95.587)
C3': (59.156,141.976,95.490)
C1': (58.831,139.728,94.912)
O4': (59.982,140.193,94.241)
C5': (61.453,142.090,94.384)
P: (63.413,142.195,96.132)
O2: (57.136,138.037,96.167)
C4': (60.021,141.639,94.292)
C2': (58.046,140.951,95.375)
O2': (57.110,141.301,94.379)
N1: (59.255,138.848,96.014)
N3: (58.691,137.141,97.559)
N4: (60.289,136.235,98.908)
C6: (60.547,138.849,96.472)
C5: (60.934,138.011,97.440)
O3': (58.655,143.299,95.418)
Image (generated by PyMOL):