Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:986:01043
Extra
PDB:
ATOM 1 O3' G A 85 31.664 88.573 113.521 1.00 36.69 O
ATOM 2 P U A 86 32.469 89.891 113.093 1.00 35.48 P
ATOM 3 OP1 U A 86 31.746 90.487 111.942 1.00 33.75 O
ATOM 4 OP2 U A 86 33.909 89.552 112.964 1.00 34.96 O
ATOM 5 O5' U A 86 32.297 90.862 114.339 1.00 33.67 O
ATOM 6 C5' U A 86 33.057 90.653 115.529 1.00 36.76 C
ATOM 7 C4' U A 86 32.607 91.604 116.608 1.00 37.82 C
ATOM 8 O4' U A 86 32.865 92.974 116.182 1.00 38.13 O
ATOM 9 C3' U A 86 31.125 91.537 116.959 1.00 37.12 C
ATOM 10 O3' U A 86 30.960 91.856 118.327 1.00 39.28 O
ATOM 11 C2' U A 86 30.543 92.682 116.148 1.00 37.56 C
ATOM 12 O2' U A 86 29.363 93.224 116.704 1.00 39.24 O
ATOM 13 C1' U A 86 31.666 93.710 116.243 1.00 37.42 C
ATOM 14 N1 U A 86 31.618 94.675 115.137 1.00 37.47 N
ATOM 15 C2 U A 86 31.315 95.979 115.457 1.00 35.78 C
ATOM 16 O2 U A 86 31.189 96.365 116.605 1.00 36.83 O
ATOM 17 N3 U A 86 31.165 96.817 114.386 1.00 35.04 N
ATOM 18 C4 U A 86 31.302 96.494 113.056 1.00 36.59 C
ATOM 19 O4 U A 86 30.997 97.326 112.203 1.00 37.53 O
ATOM 20 C5 U A 86 31.680 95.138 112.806 1.00 36.02 C
ATOM 21 C6 U A 86 31.823 94.296 113.828 1.00 36.35 C
ATOM 22 P G A 87 30.313 90.788 119.329 1.00 37.54 P
ATOM 23 OP1 G A 87 29.777 89.641 118.568 1.00 35.21 O
ATOM 24 OP2 G A 87 29.431 91.528 120.267 1.00 36.70 O
ATOM 25 O5' G A 87 31.573 90.289 120.150 1.00 40.70 O
TER
ATOM 1 O3' C B1042 36.054 93.317 107.677 1.00 37.41 O
ATOM 2 P C B1043 34.778 92.782 106.867 1.00 36.53 P
ATOM 3 OP1 C B1043 34.808 91.301 106.906 1.00 37.15 O
ATOM 4 OP2 C B1043 34.729 93.481 105.562 1.00 37.80 O
ATOM 5 O5' C B1043 33.548 93.285 107.733 1.00 34.26 O
ATOM 6 C5' C B1043 33.248 92.686 108.998 1.00 31.93 C
ATOM 7 C4' C B1043 31.954 93.237 109.524 1.00 29.53 C
ATOM 8 O4' C B1043 32.113 94.661 109.738 1.00 30.16 O
ATOM 9 C3' C B1043 30.782 93.134 108.566 1.00 29.06 C
ATOM 10 O3' C B1043 30.164 91.862 108.640 1.00 30.67 O
ATOM 11 C2' C B1043 29.882 94.261 109.047 1.00 30.40 C
ATOM 12 O2' C B1043 29.166 93.939 110.221 1.00 31.11 O
ATOM 13 C1' C B1043 30.918 95.333 109.385 1.00 30.52 C
ATOM 14 N1 C B1043 31.202 96.237 108.255 1.00 31.00 N
ATOM 15 C2 C B1043 30.339 97.300 108.030 1.00 32.49 C
ATOM 16 O2 C B1043 29.369 97.447 108.785 1.00 33.71 O
ATOM 17 N3 C B1043 30.579 98.149 106.998 1.00 33.54 N
ATOM 18 C4 C B1043 31.639 97.958 106.211 1.00 31.10 C
ATOM 19 N4 C B1043 31.842 98.824 105.219 1.00 27.53 N
ATOM 20 C5 C B1043 32.539 96.873 106.413 1.00 31.17 C
ATOM 21 C6 C B1043 32.286 96.044 107.437 1.00 31.31 C
ATOM 22 P C B1044 29.589 91.174 107.309 1.00 32.58 P
ATOM 23 OP1 C B1044 29.176 89.794 107.683 1.00 30.70 O
ATOM 24 OP2 C B1044 30.550 91.374 106.207 1.00 31.38 O
ATOM 25 O5' C B1044 28.281 92.016 106.972 1.00 33.19 O
TER
ATOM 2 P U A 86 32.469 89.891 113.093 1.00 35.48 P
ATOM 3 OP1 U A 86 31.746 90.487 111.942 1.00 33.75 O
ATOM 4 OP2 U A 86 33.909 89.552 112.964 1.00 34.96 O
ATOM 5 O5' U A 86 32.297 90.862 114.339 1.00 33.67 O
ATOM 6 C5' U A 86 33.057 90.653 115.529 1.00 36.76 C
ATOM 7 C4' U A 86 32.607 91.604 116.608 1.00 37.82 C
ATOM 8 O4' U A 86 32.865 92.974 116.182 1.00 38.13 O
ATOM 9 C3' U A 86 31.125 91.537 116.959 1.00 37.12 C
ATOM 10 O3' U A 86 30.960 91.856 118.327 1.00 39.28 O
ATOM 11 C2' U A 86 30.543 92.682 116.148 1.00 37.56 C
ATOM 12 O2' U A 86 29.363 93.224 116.704 1.00 39.24 O
ATOM 13 C1' U A 86 31.666 93.710 116.243 1.00 37.42 C
ATOM 14 N1 U A 86 31.618 94.675 115.137 1.00 37.47 N
ATOM 15 C2 U A 86 31.315 95.979 115.457 1.00 35.78 C
ATOM 16 O2 U A 86 31.189 96.365 116.605 1.00 36.83 O
ATOM 17 N3 U A 86 31.165 96.817 114.386 1.00 35.04 N
ATOM 18 C4 U A 86 31.302 96.494 113.056 1.00 36.59 C
ATOM 19 O4 U A 86 30.997 97.326 112.203 1.00 37.53 O
ATOM 20 C5 U A 86 31.680 95.138 112.806 1.00 36.02 C
ATOM 21 C6 U A 86 31.823 94.296 113.828 1.00 36.35 C
ATOM 22 P G A 87 30.313 90.788 119.329 1.00 37.54 P
ATOM 23 OP1 G A 87 29.777 89.641 118.568 1.00 35.21 O
ATOM 24 OP2 G A 87 29.431 91.528 120.267 1.00 36.70 O
ATOM 25 O5' G A 87 31.573 90.289 120.150 1.00 40.70 O
TER
ATOM 1 O3' C B1042 36.054 93.317 107.677 1.00 37.41 O
ATOM 2 P C B1043 34.778 92.782 106.867 1.00 36.53 P
ATOM 3 OP1 C B1043 34.808 91.301 106.906 1.00 37.15 O
ATOM 4 OP2 C B1043 34.729 93.481 105.562 1.00 37.80 O
ATOM 5 O5' C B1043 33.548 93.285 107.733 1.00 34.26 O
ATOM 6 C5' C B1043 33.248 92.686 108.998 1.00 31.93 C
ATOM 7 C4' C B1043 31.954 93.237 109.524 1.00 29.53 C
ATOM 8 O4' C B1043 32.113 94.661 109.738 1.00 30.16 O
ATOM 9 C3' C B1043 30.782 93.134 108.566 1.00 29.06 C
ATOM 10 O3' C B1043 30.164 91.862 108.640 1.00 30.67 O
ATOM 11 C2' C B1043 29.882 94.261 109.047 1.00 30.40 C
ATOM 12 O2' C B1043 29.166 93.939 110.221 1.00 31.11 O
ATOM 13 C1' C B1043 30.918 95.333 109.385 1.00 30.52 C
ATOM 14 N1 C B1043 31.202 96.237 108.255 1.00 31.00 N
ATOM 15 C2 C B1043 30.339 97.300 108.030 1.00 32.49 C
ATOM 16 O2 C B1043 29.369 97.447 108.785 1.00 33.71 O
ATOM 17 N3 C B1043 30.579 98.149 106.998 1.00 33.54 N
ATOM 18 C4 C B1043 31.639 97.958 106.211 1.00 31.10 C
ATOM 19 N4 C B1043 31.842 98.824 105.219 1.00 27.53 N
ATOM 20 C5 C B1043 32.539 96.873 106.413 1.00 31.17 C
ATOM 21 C6 C B1043 32.286 96.044 107.437 1.00 31.31 C
ATOM 22 P C B1044 29.589 91.174 107.309 1.00 32.58 P
ATOM 23 OP1 C B1044 29.176 89.794 107.683 1.00 30.70 O
ATOM 24 OP2 C B1044 30.550 91.374 106.207 1.00 31.38 O
ATOM 25 O5' C B1044 28.281 92.016 106.972 1.00 33.19 O
TER
Atoms:
C4: (31.302,96.494,113.056)
N3: (31.165,96.817,114.386)
OP1: (31.746,90.487,111.942)
OP2: (33.909,89.552,112.964)
C2: (31.315,95.979,115.457)
C1': (31.666,93.710,116.243)
C3': (31.125,91.537,116.959)
O5': (32.297,90.862,114.339)
O4': (32.865,92.974,116.182)
C5': (33.057,90.653,115.529)
P: (32.469,89.891,113.093)
C4': (32.607,91.604,116.608)
C2': (30.543,92.682,116.148)
O2': (29.363,93.224,116.704)
N1: (31.618,94.675,115.137)
O4: (30.997,97.326,112.203)
O2: (31.189,96.365,116.605)
C6: (31.823,94.296,113.828)
C5: (31.680,95.138,112.806)
O3': (30.960,91.856,118.327)
N3: (31.165,96.817,114.386)
OP1: (31.746,90.487,111.942)
OP2: (33.909,89.552,112.964)
C2: (31.315,95.979,115.457)
C1': (31.666,93.710,116.243)
C3': (31.125,91.537,116.959)
O5': (32.297,90.862,114.339)
O4': (32.865,92.974,116.182)
C5': (33.057,90.653,115.529)
P: (32.469,89.891,113.093)
C4': (32.607,91.604,116.608)
C2': (30.543,92.682,116.148)
O2': (29.363,93.224,116.704)
N1: (31.618,94.675,115.137)
O4: (30.997,97.326,112.203)
O2: (31.189,96.365,116.605)
C6: (31.823,94.296,113.828)
C5: (31.680,95.138,112.806)
O3': (30.960,91.856,118.327)
C2: (30.339,97.300,108.030)
OP1: (34.808,91.301,106.906)
OP2: (34.729,93.481,105.562)
C4: (31.639,97.958,106.211)
O5': (33.548,93.285,107.733)
C3': (30.782,93.134,108.566)
C1': (30.918,95.333,109.385)
O4': (32.113,94.661,109.738)
C5': (33.248,92.686,108.998)
P: (34.778,92.782,106.867)
O2: (29.369,97.447,108.785)
C4': (31.954,93.237,109.524)
C2': (29.882,94.261,109.047)
O2': (29.166,93.939,110.221)
N1: (31.202,96.237,108.255)
N3: (30.579,98.149,106.998)
N4: (31.842,98.824,105.219)
C6: (32.286,96.044,107.437)
C5: (32.539,96.873,106.413)
O3': (30.164,91.862,108.640)
OP1: (34.808,91.301,106.906)
OP2: (34.729,93.481,105.562)
C4: (31.639,97.958,106.211)
O5': (33.548,93.285,107.733)
C3': (30.782,93.134,108.566)
C1': (30.918,95.333,109.385)
O4': (32.113,94.661,109.738)
C5': (33.248,92.686,108.998)
P: (34.778,92.782,106.867)
O2: (29.369,97.447,108.785)
C4': (31.954,93.237,109.524)
C2': (29.882,94.261,109.047)
O2': (29.166,93.939,110.221)
N1: (31.202,96.237,108.255)
N3: (30.579,98.149,106.998)
N4: (31.842,98.824,105.219)
C6: (32.286,96.044,107.437)
C5: (32.539,96.873,106.413)
O3': (30.164,91.862,108.640)
Image (generated by PyMOL):