Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:986:01043
Extra
PDB:
ATOM 1 O3' G A 85 31.715 88.385 113.391 1.00 37.75 O
ATOM 2 P U A 86 32.535 89.691 112.947 1.00 37.43 P
ATOM 3 OP1 U A 86 31.805 90.294 111.805 1.00 36.32 O
ATOM 4 OP2 U A 86 33.976 89.343 112.802 1.00 36.93 O
ATOM 5 O5' U A 86 32.382 90.670 114.187 1.00 33.15 O
ATOM 6 C5' U A 86 33.122 90.438 115.380 1.00 33.72 C
ATOM 7 C4' U A 86 32.686 91.397 116.452 1.00 35.57 C
ATOM 8 O4' U A 86 32.932 92.765 116.012 1.00 34.34 O
ATOM 9 C3' U A 86 31.208 91.328 116.819 1.00 34.87 C
ATOM 10 O3' U A 86 31.068 91.664 118.185 1.00 37.69 O
ATOM 11 C2' U A 86 30.615 92.463 116.004 1.00 34.52 C
ATOM 12 O2' U A 86 29.420 92.986 116.544 1.00 33.60 O
ATOM 13 C1' U A 86 31.732 93.496 116.098 1.00 34.41 C
ATOM 14 N1 U A 86 31.672 94.475 115.007 1.00 35.10 N
ATOM 15 C2 U A 86 31.394 95.782 115.348 1.00 34.68 C
ATOM 16 O2 U A 86 31.293 96.160 116.504 1.00 34.15 O
ATOM 17 N3 U A 86 31.241 96.633 114.284 1.00 34.81 N
ATOM 18 C4 U A 86 31.348 96.316 112.949 1.00 34.87 C
ATOM 19 O4 U A 86 31.030 97.152 112.109 1.00 38.21 O
ATOM 20 C5 U A 86 31.696 94.959 112.683 1.00 33.79 C
ATOM 21 C6 U A 86 31.846 94.107 113.693 1.00 33.97 C
ATOM 22 P G A 87 30.287 90.684 119.179 1.00 37.42 P
ATOM 23 OP1 G A 87 29.721 89.543 118.431 1.00 37.78 O
ATOM 24 OP2 G A 87 29.403 91.525 120.023 1.00 38.26 O
ATOM 25 O5' G A 87 31.449 90.134 120.104 1.00 40.08 O
TER
ATOM 1 O3' C B1042 36.120 93.129 107.638 1.00 35.72 O
ATOM 2 P C B1043 34.847 92.611 106.821 1.00 36.44 P
ATOM 3 OP1 C B1043 34.869 91.126 106.839 1.00 36.78 O
ATOM 4 OP2 C B1043 34.822 93.332 105.524 1.00 37.59 O
ATOM 5 O5' C B1043 33.623 93.115 107.696 1.00 33.93 O
ATOM 6 C5' C B1043 33.296 92.471 108.930 1.00 33.60 C
ATOM 7 C4' C B1043 31.994 93.006 109.450 1.00 33.61 C
ATOM 8 O4' C B1043 32.156 94.422 109.703 1.00 32.70 O
ATOM 9 C3' C B1043 30.820 92.926 108.485 1.00 32.34 C
ATOM 10 O3' C B1043 30.184 91.655 108.528 1.00 32.48 O
ATOM 11 C2' C B1043 29.926 94.044 108.990 1.00 33.26 C
ATOM 12 O2' C B1043 29.199 93.681 110.148 1.00 32.18 O
ATOM 13 C1' C B1043 30.968 95.108 109.354 1.00 32.70 C
ATOM 14 N1 C B1043 31.275 96.020 108.236 1.00 33.07 N
ATOM 15 C2 C B1043 30.417 97.077 107.989 1.00 33.54 C
ATOM 16 O2 C B1043 29.440 97.232 108.727 1.00 35.50 O
ATOM 17 N3 C B1043 30.672 97.912 106.952 1.00 33.93 N
ATOM 18 C4 C B1043 31.744 97.715 106.186 1.00 31.49 C
ATOM 19 N4 C B1043 31.956 98.558 105.181 1.00 29.09 N
ATOM 20 C5 C B1043 32.643 96.645 106.420 1.00 32.20 C
ATOM 21 C6 C B1043 32.376 95.829 107.446 1.00 33.52 C
ATOM 22 P C B1044 29.605 91.005 107.179 1.00 34.34 P
ATOM 23 OP1 C B1044 29.164 89.620 107.489 1.00 33.29 O
ATOM 24 OP2 C B1044 30.585 91.230 106.099 1.00 33.60 O
ATOM 25 O5' C B1044 28.307 91.869 106.863 1.00 33.33 O
TER
ATOM 2 P U A 86 32.535 89.691 112.947 1.00 37.43 P
ATOM 3 OP1 U A 86 31.805 90.294 111.805 1.00 36.32 O
ATOM 4 OP2 U A 86 33.976 89.343 112.802 1.00 36.93 O
ATOM 5 O5' U A 86 32.382 90.670 114.187 1.00 33.15 O
ATOM 6 C5' U A 86 33.122 90.438 115.380 1.00 33.72 C
ATOM 7 C4' U A 86 32.686 91.397 116.452 1.00 35.57 C
ATOM 8 O4' U A 86 32.932 92.765 116.012 1.00 34.34 O
ATOM 9 C3' U A 86 31.208 91.328 116.819 1.00 34.87 C
ATOM 10 O3' U A 86 31.068 91.664 118.185 1.00 37.69 O
ATOM 11 C2' U A 86 30.615 92.463 116.004 1.00 34.52 C
ATOM 12 O2' U A 86 29.420 92.986 116.544 1.00 33.60 O
ATOM 13 C1' U A 86 31.732 93.496 116.098 1.00 34.41 C
ATOM 14 N1 U A 86 31.672 94.475 115.007 1.00 35.10 N
ATOM 15 C2 U A 86 31.394 95.782 115.348 1.00 34.68 C
ATOM 16 O2 U A 86 31.293 96.160 116.504 1.00 34.15 O
ATOM 17 N3 U A 86 31.241 96.633 114.284 1.00 34.81 N
ATOM 18 C4 U A 86 31.348 96.316 112.949 1.00 34.87 C
ATOM 19 O4 U A 86 31.030 97.152 112.109 1.00 38.21 O
ATOM 20 C5 U A 86 31.696 94.959 112.683 1.00 33.79 C
ATOM 21 C6 U A 86 31.846 94.107 113.693 1.00 33.97 C
ATOM 22 P G A 87 30.287 90.684 119.179 1.00 37.42 P
ATOM 23 OP1 G A 87 29.721 89.543 118.431 1.00 37.78 O
ATOM 24 OP2 G A 87 29.403 91.525 120.023 1.00 38.26 O
ATOM 25 O5' G A 87 31.449 90.134 120.104 1.00 40.08 O
TER
ATOM 1 O3' C B1042 36.120 93.129 107.638 1.00 35.72 O
ATOM 2 P C B1043 34.847 92.611 106.821 1.00 36.44 P
ATOM 3 OP1 C B1043 34.869 91.126 106.839 1.00 36.78 O
ATOM 4 OP2 C B1043 34.822 93.332 105.524 1.00 37.59 O
ATOM 5 O5' C B1043 33.623 93.115 107.696 1.00 33.93 O
ATOM 6 C5' C B1043 33.296 92.471 108.930 1.00 33.60 C
ATOM 7 C4' C B1043 31.994 93.006 109.450 1.00 33.61 C
ATOM 8 O4' C B1043 32.156 94.422 109.703 1.00 32.70 O
ATOM 9 C3' C B1043 30.820 92.926 108.485 1.00 32.34 C
ATOM 10 O3' C B1043 30.184 91.655 108.528 1.00 32.48 O
ATOM 11 C2' C B1043 29.926 94.044 108.990 1.00 33.26 C
ATOM 12 O2' C B1043 29.199 93.681 110.148 1.00 32.18 O
ATOM 13 C1' C B1043 30.968 95.108 109.354 1.00 32.70 C
ATOM 14 N1 C B1043 31.275 96.020 108.236 1.00 33.07 N
ATOM 15 C2 C B1043 30.417 97.077 107.989 1.00 33.54 C
ATOM 16 O2 C B1043 29.440 97.232 108.727 1.00 35.50 O
ATOM 17 N3 C B1043 30.672 97.912 106.952 1.00 33.93 N
ATOM 18 C4 C B1043 31.744 97.715 106.186 1.00 31.49 C
ATOM 19 N4 C B1043 31.956 98.558 105.181 1.00 29.09 N
ATOM 20 C5 C B1043 32.643 96.645 106.420 1.00 32.20 C
ATOM 21 C6 C B1043 32.376 95.829 107.446 1.00 33.52 C
ATOM 22 P C B1044 29.605 91.005 107.179 1.00 34.34 P
ATOM 23 OP1 C B1044 29.164 89.620 107.489 1.00 33.29 O
ATOM 24 OP2 C B1044 30.585 91.230 106.099 1.00 33.60 O
ATOM 25 O5' C B1044 28.307 91.869 106.863 1.00 33.33 O
TER
Atoms:
C4: (31.348,96.316,112.949)
N3: (31.241,96.633,114.284)
OP1: (31.805,90.294,111.805)
OP2: (33.976,89.343,112.802)
C2: (31.394,95.782,115.348)
C1': (31.732,93.496,116.098)
C3': (31.208,91.328,116.819)
O5': (32.382,90.670,114.187)
O4': (32.932,92.765,116.012)
C5': (33.122,90.438,115.380)
P: (32.535,89.691,112.947)
C4': (32.686,91.397,116.452)
C2': (30.615,92.463,116.004)
O2': (29.420,92.986,116.544)
N1: (31.672,94.475,115.007)
O4: (31.030,97.152,112.109)
O2: (31.293,96.160,116.504)
C6: (31.846,94.107,113.693)
C5: (31.696,94.959,112.683)
O3': (31.068,91.664,118.185)
N3: (31.241,96.633,114.284)
OP1: (31.805,90.294,111.805)
OP2: (33.976,89.343,112.802)
C2: (31.394,95.782,115.348)
C1': (31.732,93.496,116.098)
C3': (31.208,91.328,116.819)
O5': (32.382,90.670,114.187)
O4': (32.932,92.765,116.012)
C5': (33.122,90.438,115.380)
P: (32.535,89.691,112.947)
C4': (32.686,91.397,116.452)
C2': (30.615,92.463,116.004)
O2': (29.420,92.986,116.544)
N1: (31.672,94.475,115.007)
O4: (31.030,97.152,112.109)
O2: (31.293,96.160,116.504)
C6: (31.846,94.107,113.693)
C5: (31.696,94.959,112.683)
O3': (31.068,91.664,118.185)
C2: (30.417,97.077,107.989)
OP1: (34.869,91.126,106.839)
OP2: (34.822,93.332,105.524)
C4: (31.744,97.715,106.186)
O5': (33.623,93.115,107.696)
C3': (30.820,92.926,108.485)
C1': (30.968,95.108,109.354)
O4': (32.156,94.422,109.703)
C5': (33.296,92.471,108.930)
P: (34.847,92.611,106.821)
O2: (29.440,97.232,108.727)
C4': (31.994,93.006,109.450)
C2': (29.926,94.044,108.990)
O2': (29.199,93.681,110.148)
N1: (31.275,96.020,108.236)
N3: (30.672,97.912,106.952)
N4: (31.956,98.558,105.181)
C6: (32.376,95.829,107.446)
C5: (32.643,96.645,106.420)
O3': (30.184,91.655,108.528)
OP1: (34.869,91.126,106.839)
OP2: (34.822,93.332,105.524)
C4: (31.744,97.715,106.186)
O5': (33.623,93.115,107.696)
C3': (30.820,92.926,108.485)
C1': (30.968,95.108,109.354)
O4': (32.156,94.422,109.703)
C5': (33.296,92.471,108.930)
P: (34.847,92.611,106.821)
O2: (29.440,97.232,108.727)
C4': (31.994,93.006,109.450)
C2': (29.926,94.044,108.990)
O2': (29.199,93.681,110.148)
N1: (31.275,96.020,108.236)
N3: (30.672,97.912,106.952)
N4: (31.956,98.558,105.181)
C6: (32.376,95.829,107.446)
C5: (32.643,96.645,106.420)
O3': (30.184,91.655,108.528)
Image (generated by PyMOL):