Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02336:02334
Extra
PDB:
ATOM 1 O3' G A2335 69.545 97.537 120.860 1.00 49.34 O
ATOM 2 P U A2336 70.054 98.530 122.028 1.00 50.69 P
ATOM 3 OP1 U A2336 71.228 97.893 122.675 1.00 50.99 O
ATOM 4 OP2 U A2336 68.892 98.940 122.862 1.00 48.89 O
ATOM 5 O5' U A2336 70.609 99.806 121.260 1.00 48.72 O
ATOM 6 C5' U A2336 71.882 99.786 120.605 1.00 45.31 C
ATOM 7 C4' U A2336 72.201 101.159 120.067 1.00 45.92 C
ATOM 8 O4' U A2336 71.196 101.528 119.087 1.00 46.08 O
ATOM 9 C3' U A2336 72.168 102.295 121.075 1.00 45.22 C
ATOM 10 O3' U A2336 73.398 102.396 121.794 1.00 45.43 O
ATOM 11 C2' U A2336 71.922 103.506 120.183 1.00 45.09 C
ATOM 12 O2' U A2336 73.078 103.947 119.509 1.00 46.92 O
ATOM 13 C1' U A2336 70.972 102.926 119.136 1.00 44.72 C
ATOM 14 N1 U A2336 69.546 103.175 119.402 1.00 44.37 N
ATOM 15 C2 U A2336 69.065 104.458 119.188 1.00 44.93 C
ATOM 16 O2 U A2336 69.774 105.386 118.801 1.00 45.23 O
ATOM 17 N3 U A2336 67.726 104.618 119.445 1.00 42.34 N
ATOM 18 C4 U A2336 66.847 103.660 119.881 1.00 41.69 C
ATOM 19 O4 U A2336 65.677 103.963 120.069 1.00 44.42 O
ATOM 20 C5 U A2336 67.415 102.372 120.082 1.00 41.89 C
ATOM 21 C6 U A2336 68.709 102.176 119.842 1.00 43.27 C
ATOM 22 P C A2337 73.404 102.966 123.300 1.00 47.57 P
ATOM 23 OP1 C A2337 74.819 103.243 123.655 1.00 45.57 O
ATOM 24 OP2 C A2337 72.572 102.093 124.177 1.00 43.61 O
ATOM 25 O5' C A2337 72.666 104.372 123.186 1.00 48.35 O
TER
ATOM 1 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C B2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C B2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C B2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C B2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C B2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C B2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C B2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C B2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C B2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C B2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C B2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C B2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C B2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C B2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C B2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C B2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G B2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G B2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G B2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G B2335 65.792 98.362 120.318 1.00 47.29 O
TER
ATOM 2 P U A2336 70.054 98.530 122.028 1.00 50.69 P
ATOM 3 OP1 U A2336 71.228 97.893 122.675 1.00 50.99 O
ATOM 4 OP2 U A2336 68.892 98.940 122.862 1.00 48.89 O
ATOM 5 O5' U A2336 70.609 99.806 121.260 1.00 48.72 O
ATOM 6 C5' U A2336 71.882 99.786 120.605 1.00 45.31 C
ATOM 7 C4' U A2336 72.201 101.159 120.067 1.00 45.92 C
ATOM 8 O4' U A2336 71.196 101.528 119.087 1.00 46.08 O
ATOM 9 C3' U A2336 72.168 102.295 121.075 1.00 45.22 C
ATOM 10 O3' U A2336 73.398 102.396 121.794 1.00 45.43 O
ATOM 11 C2' U A2336 71.922 103.506 120.183 1.00 45.09 C
ATOM 12 O2' U A2336 73.078 103.947 119.509 1.00 46.92 O
ATOM 13 C1' U A2336 70.972 102.926 119.136 1.00 44.72 C
ATOM 14 N1 U A2336 69.546 103.175 119.402 1.00 44.37 N
ATOM 15 C2 U A2336 69.065 104.458 119.188 1.00 44.93 C
ATOM 16 O2 U A2336 69.774 105.386 118.801 1.00 45.23 O
ATOM 17 N3 U A2336 67.726 104.618 119.445 1.00 42.34 N
ATOM 18 C4 U A2336 66.847 103.660 119.881 1.00 41.69 C
ATOM 19 O4 U A2336 65.677 103.963 120.069 1.00 44.42 O
ATOM 20 C5 U A2336 67.415 102.372 120.082 1.00 41.89 C
ATOM 21 C6 U A2336 68.709 102.176 119.842 1.00 43.27 C
ATOM 22 P C A2337 73.404 102.966 123.300 1.00 47.57 P
ATOM 23 OP1 C A2337 74.819 103.243 123.655 1.00 45.57 O
ATOM 24 OP2 C A2337 72.572 102.093 124.177 1.00 43.61 O
ATOM 25 O5' C A2337 72.666 104.372 123.186 1.00 48.35 O
TER
ATOM 1 O3' U B2333 58.975 99.983 116.540 1.00 43.37 O
ATOM 2 P C B2334 58.797 100.131 118.129 1.00 44.63 P
ATOM 3 OP1 C B2334 58.195 98.865 118.616 1.00 41.77 O
ATOM 4 OP2 C B2334 58.129 101.425 118.415 1.00 43.08 O
ATOM 5 O5' C B2334 60.282 100.260 118.678 1.00 44.29 O
ATOM 6 C5' C B2334 61.310 99.354 118.262 1.00 43.74 C
ATOM 7 C4' C B2334 62.664 99.922 118.610 1.00 44.10 C
ATOM 8 O4' C B2334 62.937 101.062 117.739 1.00 44.96 O
ATOM 9 C3' C B2334 62.799 100.446 120.045 1.00 44.71 C
ATOM 10 O3' C B2334 64.105 100.167 120.538 1.00 45.07 O
ATOM 11 C2' C B2334 62.665 101.958 119.847 1.00 44.40 C
ATOM 12 O2' C B2334 63.236 102.786 120.844 1.00 43.25 O
ATOM 13 C1' C B2334 63.408 102.124 118.528 1.00 44.21 C
ATOM 14 N1 C B2334 63.226 103.413 117.837 1.00 44.79 N
ATOM 15 C2 C B2334 61.950 104.003 117.763 1.00 45.39 C
ATOM 16 O2 C B2334 60.956 103.348 118.125 1.00 45.62 O
ATOM 17 N3 C B2334 61.841 105.269 117.290 1.00 44.02 N
ATOM 18 C4 C B2334 62.929 105.922 116.879 1.00 43.76 C
ATOM 19 N4 C B2334 62.796 107.192 116.507 1.00 43.39 N
ATOM 20 C5 C B2334 64.210 105.309 116.851 1.00 45.11 C
ATOM 21 C6 C B2334 64.312 104.065 117.329 1.00 45.30 C
ATOM 22 P G B2335 64.458 98.707 121.110 1.00 47.08 P
ATOM 23 OP1 G B2335 63.396 97.756 120.683 1.00 43.66 O
ATOM 24 OP2 G B2335 64.812 98.816 122.552 1.00 44.97 O
ATOM 25 O5' G B2335 65.792 98.362 120.318 1.00 47.29 O
TER
Atoms:
C4: (66.847,103.660,119.881)
N3: (67.726,104.618,119.445)
OP1: (71.228,97.893,122.675)
OP2: (68.892,98.940,122.862)
C2: (69.065,104.458,119.188)
C1': (70.972,102.926,119.136)
C3': (72.168,102.295,121.075)
O5': (70.609,99.806,121.260)
O4': (71.196,101.528,119.087)
C5': (71.882,99.786,120.605)
P: (70.054,98.530,122.028)
C4': (72.201,101.159,120.067)
C2': (71.922,103.506,120.183)
O2': (73.078,103.947,119.509)
N1: (69.546,103.175,119.402)
O4: (65.677,103.963,120.069)
O2: (69.774,105.386,118.801)
C6: (68.709,102.176,119.842)
C5: (67.415,102.372,120.082)
O3': (73.398,102.396,121.794)
N3: (67.726,104.618,119.445)
OP1: (71.228,97.893,122.675)
OP2: (68.892,98.940,122.862)
C2: (69.065,104.458,119.188)
C1': (70.972,102.926,119.136)
C3': (72.168,102.295,121.075)
O5': (70.609,99.806,121.260)
O4': (71.196,101.528,119.087)
C5': (71.882,99.786,120.605)
P: (70.054,98.530,122.028)
C4': (72.201,101.159,120.067)
C2': (71.922,103.506,120.183)
O2': (73.078,103.947,119.509)
N1: (69.546,103.175,119.402)
O4: (65.677,103.963,120.069)
O2: (69.774,105.386,118.801)
C6: (68.709,102.176,119.842)
C5: (67.415,102.372,120.082)
O3': (73.398,102.396,121.794)
C2: (61.950,104.003,117.763)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
OP1: (58.195,98.865,118.616)
OP2: (58.129,101.425,118.415)
C4: (62.929,105.922,116.879)
O5': (60.282,100.260,118.678)
C3': (62.799,100.446,120.045)
C1': (63.408,102.124,118.528)
O4': (62.937,101.062,117.739)
C5': (61.310,99.354,118.262)
P: (58.797,100.131,118.129)
O2: (60.956,103.348,118.125)
C4': (62.664,99.922,118.610)
C2': (62.665,101.958,119.847)
O2': (63.236,102.786,120.844)
N1: (63.226,103.413,117.837)
N3: (61.841,105.269,117.290)
N4: (62.796,107.192,116.507)
C6: (64.312,104.065,117.329)
C5: (64.210,105.309,116.851)
O3': (64.105,100.167,120.538)
Image (generated by PyMOL):