Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:986:01043
Extra
PDB:
ATOM 1 O3' G A 85 31.958 88.711 113.920 1.00 43.94 O
ATOM 2 P U A 86 32.733 90.017 113.398 1.00 45.54 P
ATOM 3 OP1 U A 86 31.952 90.555 112.252 1.00 43.89 O
ATOM 4 OP2 U A 86 34.171 89.692 113.210 1.00 44.56 O
ATOM 5 O5' U A 86 32.589 91.035 114.618 1.00 42.67 O
ATOM 6 C5' U A 86 33.239 90.769 115.873 1.00 44.21 C
ATOM 7 C4' U A 86 32.715 91.694 116.945 1.00 45.38 C
ATOM 8 O4' U A 86 32.933 93.073 116.539 1.00 44.06 O
ATOM 9 C3' U A 86 31.227 91.580 117.257 1.00 44.90 C
ATOM 10 O3' U A 86 31.006 91.967 118.600 1.00 46.66 O
ATOM 11 C2' U A 86 30.631 92.679 116.399 1.00 45.76 C
ATOM 12 O2' U A 86 29.394 93.153 116.891 1.00 45.18 O
ATOM 13 C1' U A 86 31.701 93.756 116.541 1.00 45.08 C
ATOM 14 N1 U A 86 31.686 94.739 115.450 1.00 45.39 N
ATOM 15 C2 U A 86 31.571 96.059 115.802 1.00 45.54 C
ATOM 16 O2 U A 86 31.545 96.435 116.958 1.00 46.88 O
ATOM 17 N3 U A 86 31.492 96.931 114.750 1.00 47.62 N
ATOM 18 C4 U A 86 31.533 96.619 113.409 1.00 47.94 C
ATOM 19 O4 U A 86 31.434 97.521 112.574 1.00 49.49 O
ATOM 20 C5 U A 86 31.687 95.231 113.128 1.00 45.52 C
ATOM 21 C6 U A 86 31.759 94.361 114.132 1.00 44.74 C
ATOM 22 P G A 87 30.481 90.901 119.670 1.00 48.83 P
ATOM 23 OP1 G A 87 29.983 89.718 118.936 1.00 49.49 O
ATOM 24 OP2 G A 87 29.600 91.593 120.646 1.00 47.64 O
ATOM 25 O5' G A 87 31.807 90.494 120.443 1.00 51.59 O
TER
ATOM 1 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 2 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 3 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 4 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 5 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
ATOM 6 C5' C B1043 33.401 92.731 109.291 1.00 38.65 C
ATOM 7 C4' C B1043 32.129 93.298 109.850 1.00 36.38 C
ATOM 8 O4' C B1043 32.307 94.716 110.078 1.00 34.27 O
ATOM 9 C3' C B1043 30.937 93.212 108.916 1.00 36.66 C
ATOM 10 O3' C B1043 30.316 91.935 108.978 1.00 37.27 O
ATOM 11 C2' C B1043 30.060 94.350 109.416 1.00 37.48 C
ATOM 12 O2' C B1043 29.328 94.031 110.585 1.00 36.84 O
ATOM 13 C1' C B1043 31.117 95.405 109.753 1.00 35.64 C
ATOM 14 N1 C B1043 31.403 96.313 108.633 1.00 35.93 N
ATOM 15 C2 C B1043 30.598 97.427 108.459 1.00 37.68 C
ATOM 16 O2 C B1043 29.670 97.629 109.254 1.00 39.53 O
ATOM 17 N3 C B1043 30.848 98.268 107.430 1.00 39.50 N
ATOM 18 C4 C B1043 31.859 98.024 106.599 1.00 36.50 C
ATOM 19 N4 C B1043 32.069 98.883 105.608 1.00 35.58 N
ATOM 20 C5 C B1043 32.696 96.891 106.752 1.00 35.96 C
ATOM 21 C6 C B1043 32.437 96.070 107.772 1.00 36.34 C
ATOM 22 P C B1044 29.760 91.259 107.634 1.00 40.37 P
ATOM 23 OP1 C B1044 29.347 89.863 107.963 1.00 37.37 O
ATOM 24 OP2 C B1044 30.762 91.495 106.567 1.00 40.19 O
ATOM 25 O5' C B1044 28.455 92.101 107.285 1.00 38.51 O
TER
ATOM 2 P U A 86 32.733 90.017 113.398 1.00 45.54 P
ATOM 3 OP1 U A 86 31.952 90.555 112.252 1.00 43.89 O
ATOM 4 OP2 U A 86 34.171 89.692 113.210 1.00 44.56 O
ATOM 5 O5' U A 86 32.589 91.035 114.618 1.00 42.67 O
ATOM 6 C5' U A 86 33.239 90.769 115.873 1.00 44.21 C
ATOM 7 C4' U A 86 32.715 91.694 116.945 1.00 45.38 C
ATOM 8 O4' U A 86 32.933 93.073 116.539 1.00 44.06 O
ATOM 9 C3' U A 86 31.227 91.580 117.257 1.00 44.90 C
ATOM 10 O3' U A 86 31.006 91.967 118.600 1.00 46.66 O
ATOM 11 C2' U A 86 30.631 92.679 116.399 1.00 45.76 C
ATOM 12 O2' U A 86 29.394 93.153 116.891 1.00 45.18 O
ATOM 13 C1' U A 86 31.701 93.756 116.541 1.00 45.08 C
ATOM 14 N1 U A 86 31.686 94.739 115.450 1.00 45.39 N
ATOM 15 C2 U A 86 31.571 96.059 115.802 1.00 45.54 C
ATOM 16 O2 U A 86 31.545 96.435 116.958 1.00 46.88 O
ATOM 17 N3 U A 86 31.492 96.931 114.750 1.00 47.62 N
ATOM 18 C4 U A 86 31.533 96.619 113.409 1.00 47.94 C
ATOM 19 O4 U A 86 31.434 97.521 112.574 1.00 49.49 O
ATOM 20 C5 U A 86 31.687 95.231 113.128 1.00 45.52 C
ATOM 21 C6 U A 86 31.759 94.361 114.132 1.00 44.74 C
ATOM 22 P G A 87 30.481 90.901 119.670 1.00 48.83 P
ATOM 23 OP1 G A 87 29.983 89.718 118.936 1.00 49.49 O
ATOM 24 OP2 G A 87 29.600 91.593 120.646 1.00 47.64 O
ATOM 25 O5' G A 87 31.807 90.494 120.443 1.00 51.59 O
TER
ATOM 1 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 2 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 3 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 4 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 5 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
ATOM 6 C5' C B1043 33.401 92.731 109.291 1.00 38.65 C
ATOM 7 C4' C B1043 32.129 93.298 109.850 1.00 36.38 C
ATOM 8 O4' C B1043 32.307 94.716 110.078 1.00 34.27 O
ATOM 9 C3' C B1043 30.937 93.212 108.916 1.00 36.66 C
ATOM 10 O3' C B1043 30.316 91.935 108.978 1.00 37.27 O
ATOM 11 C2' C B1043 30.060 94.350 109.416 1.00 37.48 C
ATOM 12 O2' C B1043 29.328 94.031 110.585 1.00 36.84 O
ATOM 13 C1' C B1043 31.117 95.405 109.753 1.00 35.64 C
ATOM 14 N1 C B1043 31.403 96.313 108.633 1.00 35.93 N
ATOM 15 C2 C B1043 30.598 97.427 108.459 1.00 37.68 C
ATOM 16 O2 C B1043 29.670 97.629 109.254 1.00 39.53 O
ATOM 17 N3 C B1043 30.848 98.268 107.430 1.00 39.50 N
ATOM 18 C4 C B1043 31.859 98.024 106.599 1.00 36.50 C
ATOM 19 N4 C B1043 32.069 98.883 105.608 1.00 35.58 N
ATOM 20 C5 C B1043 32.696 96.891 106.752 1.00 35.96 C
ATOM 21 C6 C B1043 32.437 96.070 107.772 1.00 36.34 C
ATOM 22 P C B1044 29.760 91.259 107.634 1.00 40.37 P
ATOM 23 OP1 C B1044 29.347 89.863 107.963 1.00 37.37 O
ATOM 24 OP2 C B1044 30.762 91.495 106.567 1.00 40.19 O
ATOM 25 O5' C B1044 28.455 92.101 107.285 1.00 38.51 O
TER
Atoms:
C4: (31.533,96.619,113.409)
N3: (31.492,96.931,114.750)
OP1: (31.952,90.555,112.252)
OP2: (34.171,89.692,113.210)
C2: (31.571,96.059,115.802)
C1': (31.701,93.756,116.541)
C3': (31.227,91.580,117.257)
O5': (32.589,91.035,114.618)
O4': (32.933,93.073,116.539)
C5': (33.239,90.769,115.873)
P: (32.733,90.017,113.398)
C4': (32.715,91.694,116.945)
C2': (30.631,92.679,116.399)
O2': (29.394,93.153,116.891)
N1: (31.686,94.739,115.450)
O4: (31.434,97.521,112.574)
O2: (31.545,96.435,116.958)
C6: (31.759,94.361,114.132)
C5: (31.687,95.231,113.128)
O3': (31.006,91.967,118.600)
N3: (31.492,96.931,114.750)
OP1: (31.952,90.555,112.252)
OP2: (34.171,89.692,113.210)
C2: (31.571,96.059,115.802)
C1': (31.701,93.756,116.541)
C3': (31.227,91.580,117.257)
O5': (32.589,91.035,114.618)
O4': (32.933,93.073,116.539)
C5': (33.239,90.769,115.873)
P: (32.733,90.017,113.398)
C4': (32.715,91.694,116.945)
C2': (30.631,92.679,116.399)
O2': (29.394,93.153,116.891)
N1: (31.686,94.739,115.450)
O4: (31.434,97.521,112.574)
O2: (31.545,96.435,116.958)
C6: (31.759,94.361,114.132)
C5: (31.687,95.231,113.128)
O3': (31.006,91.967,118.600)
C2: (30.598,97.427,108.459)
OP1: (34.941,91.361,107.152)
OP2: (34.993,93.608,105.904)
C4: (31.859,98.024,106.599)
O5': (33.684,93.322,108.011)
C3': (30.937,93.212,108.916)
C1': (31.117,95.405,109.753)
O4': (32.307,94.716,110.078)
C5': (33.401,92.731,109.291)
P: (34.945,92.849,107.172)
O2: (29.670,97.629,109.254)
C4': (32.129,93.298,109.850)
C2': (30.060,94.350,109.416)
O2': (29.328,94.031,110.585)
N1: (31.403,96.313,108.633)
N3: (30.848,98.268,107.430)
N4: (32.069,98.883,105.608)
C6: (32.437,96.070,107.772)
C5: (32.696,96.891,106.752)
O3': (30.316,91.935,108.978)
OP1: (34.941,91.361,107.152)
OP2: (34.993,93.608,105.904)
C4: (31.859,98.024,106.599)
O5': (33.684,93.322,108.011)
C3': (30.937,93.212,108.916)
C1': (31.117,95.405,109.753)
O4': (32.307,94.716,110.078)
C5': (33.401,92.731,109.291)
P: (34.945,92.849,107.172)
O2: (29.670,97.629,109.254)
C4': (32.129,93.298,109.850)
C2': (30.060,94.350,109.416)
O2': (29.328,94.031,110.585)
N1: (31.403,96.313,108.633)
N3: (30.848,98.268,107.430)
N4: (32.069,98.883,105.608)
C6: (32.437,96.070,107.772)
C5: (32.696,96.891,106.752)
O3': (30.316,91.935,108.978)
Image (generated by PyMOL):