Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02336:02334
Extra
PDB:
ATOM 1 O3' G A2335 69.287 97.233 120.368 1.00 49.59 O
ATOM 2 P U A2336 69.763 98.223 121.552 1.00 52.51 P
ATOM 3 OP1 U A2336 70.920 97.585 122.239 1.00 53.10 O
ATOM 4 OP2 U A2336 68.571 98.624 122.348 1.00 52.55 O
ATOM 5 O5' U A2336 70.317 99.512 120.802 1.00 49.12 O
ATOM 6 C5' U A2336 71.615 99.511 120.197 1.00 46.34 C
ATOM 7 C4' U A2336 71.957 100.896 119.714 1.00 45.89 C
ATOM 8 O4' U A2336 70.982 101.308 118.722 1.00 44.72 O
ATOM 9 C3' U A2336 71.893 101.987 120.768 1.00 44.75 C
ATOM 10 O3' U A2336 73.099 102.045 121.523 1.00 46.28 O
ATOM 11 C2' U A2336 71.678 103.236 119.926 1.00 43.13 C
ATOM 12 O2' U A2336 72.875 103.680 119.329 1.00 41.57 O
ATOM 13 C1' U A2336 70.756 102.703 118.828 1.00 42.56 C
ATOM 14 N1 U A2336 69.320 102.930 119.060 1.00 40.68 N
ATOM 15 C2 U A2336 68.804 104.186 118.771 1.00 40.16 C
ATOM 16 O2 U A2336 69.483 105.106 118.335 1.00 38.81 O
ATOM 17 N3 U A2336 67.461 104.325 119.011 1.00 39.28 N
ATOM 18 C4 U A2336 66.599 103.371 119.498 1.00 39.92 C
ATOM 19 O4 U A2336 65.425 103.671 119.713 1.00 41.10 O
ATOM 20 C5 U A2336 67.202 102.104 119.768 1.00 40.10 C
ATOM 21 C6 U A2336 68.508 101.930 119.545 1.00 40.09 C
ATOM 22 P C A2337 73.067 102.591 123.035 1.00 48.52 P
ATOM 23 OP1 C A2337 74.474 102.784 123.462 1.00 46.81 O
ATOM 24 OP2 C A2337 72.163 101.730 123.846 1.00 47.11 O
ATOM 25 O5' C A2337 72.399 104.031 122.895 1.00 47.53 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
ATOM 2 P U A2336 69.763 98.223 121.552 1.00 52.51 P
ATOM 3 OP1 U A2336 70.920 97.585 122.239 1.00 53.10 O
ATOM 4 OP2 U A2336 68.571 98.624 122.348 1.00 52.55 O
ATOM 5 O5' U A2336 70.317 99.512 120.802 1.00 49.12 O
ATOM 6 C5' U A2336 71.615 99.511 120.197 1.00 46.34 C
ATOM 7 C4' U A2336 71.957 100.896 119.714 1.00 45.89 C
ATOM 8 O4' U A2336 70.982 101.308 118.722 1.00 44.72 O
ATOM 9 C3' U A2336 71.893 101.987 120.768 1.00 44.75 C
ATOM 10 O3' U A2336 73.099 102.045 121.523 1.00 46.28 O
ATOM 11 C2' U A2336 71.678 103.236 119.926 1.00 43.13 C
ATOM 12 O2' U A2336 72.875 103.680 119.329 1.00 41.57 O
ATOM 13 C1' U A2336 70.756 102.703 118.828 1.00 42.56 C
ATOM 14 N1 U A2336 69.320 102.930 119.060 1.00 40.68 N
ATOM 15 C2 U A2336 68.804 104.186 118.771 1.00 40.16 C
ATOM 16 O2 U A2336 69.483 105.106 118.335 1.00 38.81 O
ATOM 17 N3 U A2336 67.461 104.325 119.011 1.00 39.28 N
ATOM 18 C4 U A2336 66.599 103.371 119.498 1.00 39.92 C
ATOM 19 O4 U A2336 65.425 103.671 119.713 1.00 41.10 O
ATOM 20 C5 U A2336 67.202 102.104 119.768 1.00 40.10 C
ATOM 21 C6 U A2336 68.508 101.930 119.545 1.00 40.09 C
ATOM 22 P C A2337 73.067 102.591 123.035 1.00 48.52 P
ATOM 23 OP1 C A2337 74.474 102.784 123.462 1.00 46.81 O
ATOM 24 OP2 C A2337 72.163 101.730 123.846 1.00 47.11 O
ATOM 25 O5' C A2337 72.399 104.031 122.895 1.00 47.53 O
TER
ATOM 1 O3' U B2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 2 P C B2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 3 OP1 C B2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 4 OP2 C B2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 5 O5' C B2334 59.991 100.063 118.158 1.00 43.76 O
ATOM 6 C5' C B2334 61.037 99.196 117.682 1.00 43.07 C
ATOM 7 C4' C B2334 62.388 99.775 118.017 1.00 43.45 C
ATOM 8 O4' C B2334 62.645 100.956 117.196 1.00 44.15 O
ATOM 9 C3' C B2334 62.547 100.231 119.469 1.00 43.49 C
ATOM 10 O3' C B2334 63.880 99.960 119.877 1.00 45.30 O
ATOM 11 C2' C B2334 62.384 101.743 119.349 1.00 42.54 C
ATOM 12 O2' C B2334 62.975 102.497 120.383 1.00 39.38 O
ATOM 13 C1' C B2334 63.116 101.982 118.035 1.00 43.57 C
ATOM 14 N1 C B2334 62.949 103.310 117.407 1.00 45.01 N
ATOM 15 C2 C B2334 61.690 103.942 117.405 1.00 45.65 C
ATOM 16 O2 C B2334 60.684 103.303 117.764 1.00 46.17 O
ATOM 17 N3 C B2334 61.606 105.231 116.999 1.00 45.08 N
ATOM 18 C4 C B2334 62.697 105.868 116.568 1.00 44.90 C
ATOM 19 N4 C B2334 62.583 107.160 116.246 1.00 45.51 N
ATOM 20 C5 C B2334 63.958 105.218 116.465 1.00 44.74 C
ATOM 21 C6 C B2334 64.038 103.952 116.887 1.00 44.30 C
ATOM 22 P G B2335 64.218 98.611 120.675 1.00 45.27 P
ATOM 23 OP1 G B2335 63.248 97.570 120.251 1.00 42.68 O
ATOM 24 OP2 G B2335 64.360 98.953 122.120 1.00 44.07 O
ATOM 25 O5' G B2335 65.656 98.229 120.117 1.00 45.02 O
TER
Atoms:
C4: (66.599,103.371,119.498)
N3: (67.461,104.325,119.011)
OP1: (70.920,97.585,122.239)
OP2: (68.571,98.624,122.348)
C2: (68.804,104.186,118.771)
C1': (70.756,102.703,118.828)
C3': (71.893,101.987,120.768)
O5': (70.317,99.512,120.802)
O4': (70.982,101.308,118.722)
C5': (71.615,99.511,120.197)
P: (69.763,98.223,121.552)
C4': (71.957,100.896,119.714)
C2': (71.678,103.236,119.926)
O2': (72.875,103.680,119.329)
N1: (69.320,102.930,119.060)
O4: (65.425,103.671,119.713)
O2: (69.483,105.106,118.335)
C6: (68.508,101.930,119.545)
C5: (67.202,102.104,119.768)
O3': (73.099,102.045,121.523)
N3: (67.461,104.325,119.011)
OP1: (70.920,97.585,122.239)
OP2: (68.571,98.624,122.348)
C2: (68.804,104.186,118.771)
C1': (70.756,102.703,118.828)
C3': (71.893,101.987,120.768)
O5': (70.317,99.512,120.802)
O4': (70.982,101.308,118.722)
C5': (71.615,99.511,120.197)
P: (69.763,98.223,121.552)
C4': (71.957,100.896,119.714)
C2': (71.678,103.236,119.926)
O2': (72.875,103.680,119.329)
N1: (69.320,102.930,119.060)
O4: (65.425,103.671,119.713)
O2: (69.483,105.106,118.335)
C6: (68.508,101.930,119.545)
C5: (67.202,102.104,119.768)
O3': (73.099,102.045,121.523)
C2: (61.690,103.942,117.405)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
OP1: (58.058,98.477,118.211)
OP2: (57.693,101.011,118.110)
C4: (62.697,105.868,116.568)
O5': (59.991,100.063,118.158)
C3': (62.547,100.231,119.469)
C1': (63.116,101.982,118.035)
O4': (62.645,100.956,117.196)
C5': (61.037,99.196,117.682)
P: (58.478,99.818,117.727)
O2: (60.684,103.303,117.764)
C4': (62.388,99.775,118.017)
C2': (62.384,101.743,119.349)
O2': (62.975,102.497,120.383)
N1: (62.949,103.310,117.407)
N3: (61.606,105.231,116.999)
N4: (62.583,107.160,116.246)
C6: (64.038,103.952,116.887)
C5: (63.958,105.218,116.465)
O3': (63.880,99.960,119.877)
Image (generated by PyMOL):