Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0827:02488
Extra
PDB:
ATOM 1 O3' C A 826 63.239 143.787 91.005 1.00 33.16 O
ATOM 2 P U A 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U A 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U A 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U A 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U A 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U A 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U A 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U A 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U A 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U A 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U A 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U A 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U A 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U A 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U A 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U A 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U A 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U A 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U A 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U A 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A A 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A A 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A A 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A A 828 61.299 149.461 87.586 1.00 31.29 O
TER
ATOM 1 O3' G B2487 64.623 141.476 95.119 1.00 32.04 O
ATOM 2 P C B2488 63.460 142.126 95.996 1.00 34.18 P
ATOM 3 OP1 C B2488 63.421 143.573 95.677 1.00 32.85 O
ATOM 4 OP2 C B2488 63.636 141.678 97.400 1.00 32.66 O
ATOM 5 O5' C B2488 62.143 141.451 95.421 1.00 33.40 O
ATOM 6 C5' C B2488 61.553 141.928 94.206 1.00 34.86 C
ATOM 7 C4' C B2488 60.104 141.565 94.174 1.00 34.72 C
ATOM 8 O4' C B2488 59.989 140.126 94.122 1.00 37.31 O
ATOM 9 C3' C B2488 59.348 141.960 95.425 1.00 35.01 C
ATOM 10 O3' C B2488 58.894 143.300 95.308 1.00 36.35 O
ATOM 11 C2' C B2488 58.197 140.971 95.434 1.00 36.19 C
ATOM 12 O2' C B2488 57.183 141.354 94.530 1.00 36.86 O
ATOM 13 C1' C B2488 58.881 139.712 94.895 1.00 36.84 C
ATOM 14 N1 C B2488 59.359 138.778 95.926 1.00 37.84 N
ATOM 15 C2 C B2488 58.436 137.960 96.568 1.00 39.35 C
ATOM 16 O2 C B2488 57.241 138.053 96.263 1.00 43.10 O
ATOM 17 N3 C B2488 58.862 137.086 97.504 1.00 38.11 N
ATOM 18 C4 C B2488 60.153 137.009 97.801 1.00 36.82 C
ATOM 19 N4 C B2488 60.528 136.120 98.711 1.00 35.65 N
ATOM 20 C5 C B2488 61.119 137.839 97.172 1.00 38.92 C
ATOM 21 C6 C B2488 60.684 138.703 96.249 1.00 38.76 C
ATOM 22 P U B2489 58.801 144.231 96.610 1.00 34.98 P
ATOM 23 OP1 U B2489 59.820 145.284 96.446 1.00 35.12 O
ATOM 24 OP2 U B2489 58.819 143.372 97.821 1.00 35.51 O
ATOM 25 O5' U B2489 57.371 144.912 96.484 1.00 33.57 O
TER
ATOM 2 P U A 827 61.693 144.132 91.243 1.00 34.99 P
ATOM 3 OP1 U A 827 61.555 144.898 92.501 1.00 33.48 O
ATOM 4 OP2 U A 827 60.915 142.882 91.056 1.00 36.20 O
ATOM 5 O5' U A 827 61.341 145.102 90.031 1.00 34.35 O
ATOM 6 C5' U A 827 61.672 144.744 88.675 1.00 33.28 C
ATOM 7 C4' U A 827 60.464 144.900 87.793 1.00 33.94 C
ATOM 8 O4' U A 827 59.451 143.966 88.221 1.00 35.94 O
ATOM 9 C3' U A 827 59.773 146.246 87.892 1.00 33.59 C
ATOM 10 O3' U A 827 60.420 147.169 87.033 1.00 31.34 O
ATOM 11 C2' U A 827 58.350 145.937 87.437 1.00 34.17 C
ATOM 12 O2' U A 827 58.207 145.959 86.039 1.00 35.63 O
ATOM 13 C1' U A 827 58.172 144.493 87.917 1.00 35.80 C
ATOM 14 N1 U A 827 57.276 144.263 89.062 1.00 36.94 N
ATOM 15 C2 U A 827 55.945 144.626 88.932 1.00 37.67 C
ATOM 16 O2 U A 827 55.502 145.186 87.948 1.00 39.36 O
ATOM 17 N3 U A 827 55.153 144.319 90.006 1.00 37.39 N
ATOM 18 C4 U A 827 55.547 143.724 91.180 1.00 39.13 C
ATOM 19 O4 U A 827 54.714 143.514 92.066 1.00 40.38 O
ATOM 20 C5 U A 827 56.941 143.411 91.250 1.00 39.44 C
ATOM 21 C6 U A 827 57.735 143.684 90.218 1.00 36.85 C
ATOM 22 P A A 828 59.999 148.712 87.057 1.00 31.74 P
ATOM 23 OP1 A A 828 58.923 148.883 88.050 1.00 31.95 O
ATOM 24 OP2 A A 828 59.777 149.126 85.651 1.00 31.90 O
ATOM 25 O5' A A 828 61.299 149.461 87.586 1.00 31.29 O
TER
ATOM 1 O3' G B2487 64.623 141.476 95.119 1.00 32.04 O
ATOM 2 P C B2488 63.460 142.126 95.996 1.00 34.18 P
ATOM 3 OP1 C B2488 63.421 143.573 95.677 1.00 32.85 O
ATOM 4 OP2 C B2488 63.636 141.678 97.400 1.00 32.66 O
ATOM 5 O5' C B2488 62.143 141.451 95.421 1.00 33.40 O
ATOM 6 C5' C B2488 61.553 141.928 94.206 1.00 34.86 C
ATOM 7 C4' C B2488 60.104 141.565 94.174 1.00 34.72 C
ATOM 8 O4' C B2488 59.989 140.126 94.122 1.00 37.31 O
ATOM 9 C3' C B2488 59.348 141.960 95.425 1.00 35.01 C
ATOM 10 O3' C B2488 58.894 143.300 95.308 1.00 36.35 O
ATOM 11 C2' C B2488 58.197 140.971 95.434 1.00 36.19 C
ATOM 12 O2' C B2488 57.183 141.354 94.530 1.00 36.86 O
ATOM 13 C1' C B2488 58.881 139.712 94.895 1.00 36.84 C
ATOM 14 N1 C B2488 59.359 138.778 95.926 1.00 37.84 N
ATOM 15 C2 C B2488 58.436 137.960 96.568 1.00 39.35 C
ATOM 16 O2 C B2488 57.241 138.053 96.263 1.00 43.10 O
ATOM 17 N3 C B2488 58.862 137.086 97.504 1.00 38.11 N
ATOM 18 C4 C B2488 60.153 137.009 97.801 1.00 36.82 C
ATOM 19 N4 C B2488 60.528 136.120 98.711 1.00 35.65 N
ATOM 20 C5 C B2488 61.119 137.839 97.172 1.00 38.92 C
ATOM 21 C6 C B2488 60.684 138.703 96.249 1.00 38.76 C
ATOM 22 P U B2489 58.801 144.231 96.610 1.00 34.98 P
ATOM 23 OP1 U B2489 59.820 145.284 96.446 1.00 35.12 O
ATOM 24 OP2 U B2489 58.819 143.372 97.821 1.00 35.51 O
ATOM 25 O5' U B2489 57.371 144.912 96.484 1.00 33.57 O
TER
Atoms:
C4: (55.547,143.724,91.180)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
N3: (55.153,144.319,90.006)
OP1: (61.555,144.898,92.501)
OP2: (60.915,142.882,91.056)
C2: (55.945,144.626,88.932)
C1': (58.172,144.493,87.917)
C3': (59.773,146.246,87.892)
O5': (61.341,145.102,90.031)
O4': (59.451,143.966,88.221)
C5': (61.672,144.744,88.675)
P: (61.693,144.132,91.243)
C4': (60.464,144.900,87.793)
C2': (58.350,145.937,87.437)
O2': (58.207,145.959,86.039)
N1: (57.276,144.263,89.062)
O4: (54.714,143.514,92.066)
O2: (55.502,145.186,87.948)
C6: (57.735,143.684,90.218)
C5: (56.941,143.411,91.250)
O3': (60.420,147.169,87.033)
C2: (58.436,137.960,96.568)
OP1: (63.421,143.573,95.677)
OP2: (63.636,141.678,97.400)
C4: (60.153,137.009,97.801)
O5': (62.143,141.451,95.421)
C3': (59.348,141.960,95.425)
C1': (58.881,139.712,94.895)
O4': (59.989,140.126,94.122)
C5': (61.553,141.928,94.206)
P: (63.460,142.126,95.996)
O2: (57.241,138.053,96.263)
C4': (60.104,141.565,94.174)
C2': (58.197,140.971,95.434)
O2': (57.183,141.354,94.530)
N1: (59.359,138.778,95.926)
N3: (58.862,137.086,97.504)
N4: (60.528,136.120,98.711)
C6: (60.684,138.703,96.249)
C5: (61.119,137.839,97.172)
O3': (58.894,143.300,95.308)
OP1: (63.421,143.573,95.677)
OP2: (63.636,141.678,97.400)
C4: (60.153,137.009,97.801)
O5': (62.143,141.451,95.421)
C3': (59.348,141.960,95.425)
C1': (58.881,139.712,94.895)
O4': (59.989,140.126,94.122)
C5': (61.553,141.928,94.206)
P: (63.460,142.126,95.996)
O2: (57.241,138.053,96.263)
C4': (60.104,141.565,94.174)
C2': (58.197,140.971,95.434)
O2': (57.183,141.354,94.530)
N1: (59.359,138.778,95.926)
N3: (58.862,137.086,97.504)
N4: (60.528,136.120,98.711)
C6: (60.684,138.703,96.249)
C5: (61.119,137.839,97.172)
O3': (58.894,143.300,95.308)
Image (generated by PyMOL):