Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:986:01043
Extra
PDB:
ATOM 1 O3' G A 85 31.787 88.527 113.556 1.00 39.29 O
ATOM 2 P U A 86 32.502 89.844 112.985 1.00 39.60 P
ATOM 3 OP1 U A 86 31.689 90.307 111.835 1.00 38.53 O
ATOM 4 OP2 U A 86 33.951 89.577 112.795 1.00 39.73 O
ATOM 5 O5' U A 86 32.362 90.877 114.184 1.00 35.73 O
ATOM 6 C5' U A 86 33.122 90.684 115.377 1.00 37.57 C
ATOM 7 C4' U A 86 32.643 91.611 116.457 1.00 39.93 C
ATOM 8 O4' U A 86 32.874 92.985 116.039 1.00 39.74 O
ATOM 9 C3' U A 86 31.161 91.508 116.799 1.00 40.29 C
ATOM 10 O3' U A 86 30.977 91.836 118.165 1.00 42.07 O
ATOM 11 C2' U A 86 30.562 92.640 115.981 1.00 41.32 C
ATOM 12 O2' U A 86 29.362 93.142 116.527 1.00 41.26 O
ATOM 13 C1' U A 86 31.658 93.694 116.098 1.00 41.55 C
ATOM 14 N1 U A 86 31.616 94.683 115.014 1.00 42.31 N
ATOM 15 C2 U A 86 31.330 95.987 115.353 1.00 42.99 C
ATOM 16 O2 U A 86 31.173 96.357 116.505 1.00 46.15 O
ATOM 17 N3 U A 86 31.228 96.846 114.296 1.00 42.93 N
ATOM 18 C4 U A 86 31.379 96.542 112.967 1.00 42.77 C
ATOM 19 O4 U A 86 31.105 97.392 112.126 1.00 45.03 O
ATOM 20 C5 U A 86 31.712 95.186 112.701 1.00 41.99 C
ATOM 21 C6 U A 86 31.821 94.325 113.707 1.00 41.88 C
ATOM 22 P G A 87 30.323 90.773 119.171 1.00 41.54 P
ATOM 23 OP1 G A 87 29.801 89.615 118.419 1.00 39.76 O
ATOM 24 OP2 G A 87 29.429 91.511 120.097 1.00 42.28 O
ATOM 25 O5' G A 87 31.576 90.308 120.024 1.00 44.49 O
TER
ATOM 1 O3' C B1042 36.086 93.228 107.686 1.00 41.65 O
ATOM 2 P C B1043 34.839 92.672 106.859 1.00 42.43 P
ATOM 3 OP1 C B1043 34.891 91.190 106.972 1.00 42.60 O
ATOM 4 OP2 C B1043 34.817 93.313 105.519 1.00 40.30 O
ATOM 5 O5' C B1043 33.594 93.188 107.692 1.00 39.56 O
ATOM 6 C5' C B1043 33.237 92.561 108.929 1.00 38.02 C
ATOM 7 C4' C B1043 31.956 93.148 109.444 1.00 36.46 C
ATOM 8 O4' C B1043 32.144 94.572 109.624 1.00 35.59 O
ATOM 9 C3' C B1043 30.781 93.052 108.492 1.00 35.84 C
ATOM 10 O3' C B1043 30.145 91.790 108.593 1.00 35.42 O
ATOM 11 C2' C B1043 29.900 94.199 108.961 1.00 35.92 C
ATOM 12 O2' C B1043 29.182 93.887 110.139 1.00 36.06 O
ATOM 13 C1' C B1043 30.954 95.259 109.289 1.00 35.03 C
ATOM 14 N1 C B1043 31.243 96.171 108.170 1.00 34.02 N
ATOM 15 C2 C B1043 30.518 97.352 108.067 1.00 34.26 C
ATOM 16 O2 C B1043 29.658 97.605 108.921 1.00 34.56 O
ATOM 17 N3 C B1043 30.769 98.197 107.042 1.00 34.92 N
ATOM 18 C4 C B1043 31.708 97.897 106.145 1.00 34.48 C
ATOM 19 N4 C B1043 31.926 98.764 105.156 1.00 32.73 N
ATOM 20 C5 C B1043 32.464 96.697 106.224 1.00 34.63 C
ATOM 21 C6 C B1043 32.203 95.871 107.243 1.00 34.28 C
ATOM 22 P C B1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 23 OP1 C B1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 24 OP2 C B1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 25 O5' C B1044 28.254 92.021 106.947 1.00 36.71 O
TER
ATOM 2 P U A 86 32.502 89.844 112.985 1.00 39.60 P
ATOM 3 OP1 U A 86 31.689 90.307 111.835 1.00 38.53 O
ATOM 4 OP2 U A 86 33.951 89.577 112.795 1.00 39.73 O
ATOM 5 O5' U A 86 32.362 90.877 114.184 1.00 35.73 O
ATOM 6 C5' U A 86 33.122 90.684 115.377 1.00 37.57 C
ATOM 7 C4' U A 86 32.643 91.611 116.457 1.00 39.93 C
ATOM 8 O4' U A 86 32.874 92.985 116.039 1.00 39.74 O
ATOM 9 C3' U A 86 31.161 91.508 116.799 1.00 40.29 C
ATOM 10 O3' U A 86 30.977 91.836 118.165 1.00 42.07 O
ATOM 11 C2' U A 86 30.562 92.640 115.981 1.00 41.32 C
ATOM 12 O2' U A 86 29.362 93.142 116.527 1.00 41.26 O
ATOM 13 C1' U A 86 31.658 93.694 116.098 1.00 41.55 C
ATOM 14 N1 U A 86 31.616 94.683 115.014 1.00 42.31 N
ATOM 15 C2 U A 86 31.330 95.987 115.353 1.00 42.99 C
ATOM 16 O2 U A 86 31.173 96.357 116.505 1.00 46.15 O
ATOM 17 N3 U A 86 31.228 96.846 114.296 1.00 42.93 N
ATOM 18 C4 U A 86 31.379 96.542 112.967 1.00 42.77 C
ATOM 19 O4 U A 86 31.105 97.392 112.126 1.00 45.03 O
ATOM 20 C5 U A 86 31.712 95.186 112.701 1.00 41.99 C
ATOM 21 C6 U A 86 31.821 94.325 113.707 1.00 41.88 C
ATOM 22 P G A 87 30.323 90.773 119.171 1.00 41.54 P
ATOM 23 OP1 G A 87 29.801 89.615 118.419 1.00 39.76 O
ATOM 24 OP2 G A 87 29.429 91.511 120.097 1.00 42.28 O
ATOM 25 O5' G A 87 31.576 90.308 120.024 1.00 44.49 O
TER
ATOM 1 O3' C B1042 36.086 93.228 107.686 1.00 41.65 O
ATOM 2 P C B1043 34.839 92.672 106.859 1.00 42.43 P
ATOM 3 OP1 C B1043 34.891 91.190 106.972 1.00 42.60 O
ATOM 4 OP2 C B1043 34.817 93.313 105.519 1.00 40.30 O
ATOM 5 O5' C B1043 33.594 93.188 107.692 1.00 39.56 O
ATOM 6 C5' C B1043 33.237 92.561 108.929 1.00 38.02 C
ATOM 7 C4' C B1043 31.956 93.148 109.444 1.00 36.46 C
ATOM 8 O4' C B1043 32.144 94.572 109.624 1.00 35.59 O
ATOM 9 C3' C B1043 30.781 93.052 108.492 1.00 35.84 C
ATOM 10 O3' C B1043 30.145 91.790 108.593 1.00 35.42 O
ATOM 11 C2' C B1043 29.900 94.199 108.961 1.00 35.92 C
ATOM 12 O2' C B1043 29.182 93.887 110.139 1.00 36.06 O
ATOM 13 C1' C B1043 30.954 95.259 109.289 1.00 35.03 C
ATOM 14 N1 C B1043 31.243 96.171 108.170 1.00 34.02 N
ATOM 15 C2 C B1043 30.518 97.352 108.067 1.00 34.26 C
ATOM 16 O2 C B1043 29.658 97.605 108.921 1.00 34.56 O
ATOM 17 N3 C B1043 30.769 98.197 107.042 1.00 34.92 N
ATOM 18 C4 C B1043 31.708 97.897 106.145 1.00 34.48 C
ATOM 19 N4 C B1043 31.926 98.764 105.156 1.00 32.73 N
ATOM 20 C5 C B1043 32.464 96.697 106.224 1.00 34.63 C
ATOM 21 C6 C B1043 32.203 95.871 107.243 1.00 34.28 C
ATOM 22 P C B1044 29.516 91.113 107.287 1.00 36.35 P
ATOM 23 OP1 C B1044 29.049 89.770 107.704 1.00 35.91 O
ATOM 24 OP2 C B1044 30.480 91.238 106.177 1.00 36.82 O
ATOM 25 O5' C B1044 28.254 92.021 106.947 1.00 36.71 O
TER
Atoms:
C4: (31.379,96.542,112.967)
N3: (31.228,96.846,114.296)
OP1: (31.689,90.307,111.835)
OP2: (33.951,89.577,112.795)
C2: (31.330,95.987,115.353)
C1': (31.658,93.694,116.098)
C3': (31.161,91.508,116.799)
O5': (32.362,90.877,114.184)
O4': (32.874,92.985,116.039)
C5': (33.122,90.684,115.377)
P: (32.502,89.844,112.985)
C4': (32.643,91.611,116.457)
C2': (30.562,92.640,115.981)
O2': (29.362,93.142,116.527)
N1: (31.616,94.683,115.014)
O4: (31.105,97.392,112.126)
O2: (31.173,96.357,116.505)
C6: (31.821,94.325,113.707)
C5: (31.712,95.186,112.701)
O3': (30.977,91.836,118.165)
N3: (31.228,96.846,114.296)
OP1: (31.689,90.307,111.835)
OP2: (33.951,89.577,112.795)
C2: (31.330,95.987,115.353)
C1': (31.658,93.694,116.098)
C3': (31.161,91.508,116.799)
O5': (32.362,90.877,114.184)
O4': (32.874,92.985,116.039)
C5': (33.122,90.684,115.377)
P: (32.502,89.844,112.985)
C4': (32.643,91.611,116.457)
C2': (30.562,92.640,115.981)
O2': (29.362,93.142,116.527)
N1: (31.616,94.683,115.014)
O4: (31.105,97.392,112.126)
O2: (31.173,96.357,116.505)
C6: (31.821,94.325,113.707)
C5: (31.712,95.186,112.701)
O3': (30.977,91.836,118.165)
C2: (30.518,97.352,108.067)
OP1: (34.891,91.190,106.972)
OP2: (34.817,93.313,105.519)
C4: (31.708,97.897,106.145)
O5': (33.594,93.188,107.692)
C3': (30.781,93.052,108.492)
C1': (30.954,95.259,109.289)
O4': (32.144,94.572,109.624)
C5': (33.237,92.561,108.929)
P: (34.839,92.672,106.859)
O2: (29.658,97.605,108.921)
C4': (31.956,93.148,109.444)
C2': (29.900,94.199,108.961)
O2': (29.182,93.887,110.139)
N1: (31.243,96.171,108.170)
N3: (30.769,98.197,107.042)
N4: (31.926,98.764,105.156)
C6: (32.203,95.871,107.243)
C5: (32.464,96.697,106.224)
O3': (30.145,91.790,108.593)
OP1: (34.891,91.190,106.972)
OP2: (34.817,93.313,105.519)
C4: (31.708,97.897,106.145)
O5': (33.594,93.188,107.692)
C3': (30.781,93.052,108.492)
C1': (30.954,95.259,109.289)
O4': (32.144,94.572,109.624)
C5': (33.237,92.561,108.929)
P: (34.839,92.672,106.859)
O2: (29.658,97.605,108.921)
C4': (31.956,93.148,109.444)
C2': (29.900,94.199,108.961)
O2': (29.182,93.887,110.139)
N1: (31.243,96.171,108.170)
N3: (30.769,98.197,107.042)
N4: (31.926,98.764,105.156)
C6: (32.203,95.871,107.243)
C5: (32.464,96.697,106.224)
O3': (30.145,91.790,108.593)
Image (generated by PyMOL):