Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0827:02488
Extra
PDB:
ATOM 1 O3' C A 826 63.026 143.638 90.902 1.00 28.81 O
ATOM 2 P U A 827 61.477 144.023 91.089 1.00 27.79 P
ATOM 3 OP1 U A 827 61.337 144.815 92.335 1.00 27.46 O
ATOM 4 OP2 U A 827 60.677 142.780 90.912 1.00 29.86 O
ATOM 5 O5' U A 827 61.163 144.985 89.860 1.00 27.26 O
ATOM 6 C5' U A 827 61.430 144.585 88.505 1.00 24.75 C
ATOM 7 C4' U A 827 60.194 144.763 87.666 1.00 26.77 C
ATOM 8 O4' U A 827 59.182 143.826 88.098 1.00 29.93 O
ATOM 9 C3' U A 827 59.516 146.110 87.814 1.00 26.91 C
ATOM 10 O3' U A 827 60.150 147.045 86.964 1.00 26.28 O
ATOM 11 C2' U A 827 58.075 145.822 87.393 1.00 28.16 C
ATOM 12 O2' U A 827 57.874 145.839 86.002 1.00 30.32 O
ATOM 13 C1' U A 827 57.897 144.375 87.851 1.00 30.11 C
ATOM 14 N1 U A 827 57.025 144.132 89.012 1.00 31.74 N
ATOM 15 C2 U A 827 55.692 144.505 88.915 1.00 32.35 C
ATOM 16 O2 U A 827 55.233 145.089 87.952 1.00 33.01 O
ATOM 17 N3 U A 827 54.918 144.179 89.998 1.00 33.75 N
ATOM 18 C4 U A 827 55.333 143.555 91.157 1.00 35.91 C
ATOM 19 O4 U A 827 54.516 143.336 92.056 1.00 37.18 O
ATOM 20 C5 U A 827 56.729 143.235 91.196 1.00 35.43 C
ATOM 21 C6 U A 827 57.505 143.528 90.152 1.00 32.84 C
ATOM 22 P A A 828 59.786 148.600 87.077 1.00 29.10 P
ATOM 23 OP1 A A 828 58.772 148.765 88.148 1.00 28.64 O
ATOM 24 OP2 A A 828 59.501 149.122 85.714 1.00 27.79 O
ATOM 25 O5' A A 828 61.154 149.248 87.563 1.00 28.29 O
TER
ATOM 1 O3' G B2487 64.460 141.221 94.930 1.00 26.02 O
ATOM 2 P C B2488 63.351 141.897 95.867 1.00 27.66 P
ATOM 3 OP1 C B2488 63.338 143.342 95.550 1.00 27.09 O
ATOM 4 OP2 C B2488 63.572 141.449 97.261 1.00 27.74 O
ATOM 5 O5' C B2488 61.986 141.249 95.376 1.00 27.39 O
ATOM 6 C5' C B2488 61.367 141.682 94.155 1.00 29.60 C
ATOM 7 C4' C B2488 59.920 141.270 94.135 1.00 30.04 C
ATOM 8 O4' C B2488 59.840 139.825 94.095 1.00 31.84 O
ATOM 9 C3' C B2488 59.119 141.653 95.366 1.00 29.84 C
ATOM 10 O3' C B2488 58.639 142.986 95.273 1.00 31.35 O
ATOM 11 C2' C B2488 57.985 140.642 95.333 1.00 29.86 C
ATOM 12 O2' C B2488 56.997 140.997 94.390 1.00 28.68 O
ATOM 13 C1' C B2488 58.716 139.391 94.842 1.00 31.36 C
ATOM 14 N1 C B2488 59.178 138.475 95.908 1.00 33.34 N
ATOM 15 C2 C B2488 58.251 137.611 96.502 1.00 34.07 C
ATOM 16 O2 C B2488 57.067 137.651 96.129 1.00 36.63 O
ATOM 17 N3 C B2488 58.665 136.752 97.462 1.00 32.56 N
ATOM 18 C4 C B2488 59.944 136.729 97.829 1.00 31.32 C
ATOM 19 N4 C B2488 60.309 135.849 98.762 1.00 31.33 N
ATOM 20 C5 C B2488 60.908 137.601 97.252 1.00 32.62 C
ATOM 21 C6 C B2488 60.488 138.452 96.306 1.00 33.50 C
ATOM 22 P U B2489 58.622 143.929 96.577 1.00 31.97 P
ATOM 23 OP1 U B2489 59.717 144.920 96.441 1.00 33.17 O
ATOM 24 OP2 U B2489 58.540 143.095 97.806 1.00 32.06 O
ATOM 25 O5' U B2489 57.262 144.732 96.428 1.00 28.89 O
TER
ATOM 2 P U A 827 61.477 144.023 91.089 1.00 27.79 P
ATOM 3 OP1 U A 827 61.337 144.815 92.335 1.00 27.46 O
ATOM 4 OP2 U A 827 60.677 142.780 90.912 1.00 29.86 O
ATOM 5 O5' U A 827 61.163 144.985 89.860 1.00 27.26 O
ATOM 6 C5' U A 827 61.430 144.585 88.505 1.00 24.75 C
ATOM 7 C4' U A 827 60.194 144.763 87.666 1.00 26.77 C
ATOM 8 O4' U A 827 59.182 143.826 88.098 1.00 29.93 O
ATOM 9 C3' U A 827 59.516 146.110 87.814 1.00 26.91 C
ATOM 10 O3' U A 827 60.150 147.045 86.964 1.00 26.28 O
ATOM 11 C2' U A 827 58.075 145.822 87.393 1.00 28.16 C
ATOM 12 O2' U A 827 57.874 145.839 86.002 1.00 30.32 O
ATOM 13 C1' U A 827 57.897 144.375 87.851 1.00 30.11 C
ATOM 14 N1 U A 827 57.025 144.132 89.012 1.00 31.74 N
ATOM 15 C2 U A 827 55.692 144.505 88.915 1.00 32.35 C
ATOM 16 O2 U A 827 55.233 145.089 87.952 1.00 33.01 O
ATOM 17 N3 U A 827 54.918 144.179 89.998 1.00 33.75 N
ATOM 18 C4 U A 827 55.333 143.555 91.157 1.00 35.91 C
ATOM 19 O4 U A 827 54.516 143.336 92.056 1.00 37.18 O
ATOM 20 C5 U A 827 56.729 143.235 91.196 1.00 35.43 C
ATOM 21 C6 U A 827 57.505 143.528 90.152 1.00 32.84 C
ATOM 22 P A A 828 59.786 148.600 87.077 1.00 29.10 P
ATOM 23 OP1 A A 828 58.772 148.765 88.148 1.00 28.64 O
ATOM 24 OP2 A A 828 59.501 149.122 85.714 1.00 27.79 O
ATOM 25 O5' A A 828 61.154 149.248 87.563 1.00 28.29 O
TER
ATOM 1 O3' G B2487 64.460 141.221 94.930 1.00 26.02 O
ATOM 2 P C B2488 63.351 141.897 95.867 1.00 27.66 P
ATOM 3 OP1 C B2488 63.338 143.342 95.550 1.00 27.09 O
ATOM 4 OP2 C B2488 63.572 141.449 97.261 1.00 27.74 O
ATOM 5 O5' C B2488 61.986 141.249 95.376 1.00 27.39 O
ATOM 6 C5' C B2488 61.367 141.682 94.155 1.00 29.60 C
ATOM 7 C4' C B2488 59.920 141.270 94.135 1.00 30.04 C
ATOM 8 O4' C B2488 59.840 139.825 94.095 1.00 31.84 O
ATOM 9 C3' C B2488 59.119 141.653 95.366 1.00 29.84 C
ATOM 10 O3' C B2488 58.639 142.986 95.273 1.00 31.35 O
ATOM 11 C2' C B2488 57.985 140.642 95.333 1.00 29.86 C
ATOM 12 O2' C B2488 56.997 140.997 94.390 1.00 28.68 O
ATOM 13 C1' C B2488 58.716 139.391 94.842 1.00 31.36 C
ATOM 14 N1 C B2488 59.178 138.475 95.908 1.00 33.34 N
ATOM 15 C2 C B2488 58.251 137.611 96.502 1.00 34.07 C
ATOM 16 O2 C B2488 57.067 137.651 96.129 1.00 36.63 O
ATOM 17 N3 C B2488 58.665 136.752 97.462 1.00 32.56 N
ATOM 18 C4 C B2488 59.944 136.729 97.829 1.00 31.32 C
ATOM 19 N4 C B2488 60.309 135.849 98.762 1.00 31.33 N
ATOM 20 C5 C B2488 60.908 137.601 97.252 1.00 32.62 C
ATOM 21 C6 C B2488 60.488 138.452 96.306 1.00 33.50 C
ATOM 22 P U B2489 58.622 143.929 96.577 1.00 31.97 P
ATOM 23 OP1 U B2489 59.717 144.920 96.441 1.00 33.17 O
ATOM 24 OP2 U B2489 58.540 143.095 97.806 1.00 32.06 O
ATOM 25 O5' U B2489 57.262 144.732 96.428 1.00 28.89 O
TER
Atoms:
C4: (55.333,143.555,91.157)
N3: (54.918,144.179,89.998)
OP1: (61.337,144.815,92.335)
OP2: (60.677,142.780,90.912)
C2: (55.692,144.505,88.915)
C1': (57.897,144.375,87.851)
C3': (59.516,146.110,87.814)
O5': (61.163,144.985,89.860)
O4': (59.182,143.826,88.098)
C5': (61.430,144.585,88.505)
P: (61.477,144.023,91.089)
C4': (60.194,144.763,87.666)
C2': (58.075,145.822,87.393)
O2': (57.874,145.839,86.002)
N1: (57.025,144.132,89.012)
O4: (54.516,143.336,92.056)
O2: (55.233,145.089,87.952)
C6: (57.505,143.528,90.152)
C5: (56.729,143.235,91.196)
O3': (60.150,147.045,86.964)
N3: (54.918,144.179,89.998)
OP1: (61.337,144.815,92.335)
OP2: (60.677,142.780,90.912)
C2: (55.692,144.505,88.915)
C1': (57.897,144.375,87.851)
C3': (59.516,146.110,87.814)
O5': (61.163,144.985,89.860)
O4': (59.182,143.826,88.098)
C5': (61.430,144.585,88.505)
P: (61.477,144.023,91.089)
C4': (60.194,144.763,87.666)
C2': (58.075,145.822,87.393)
O2': (57.874,145.839,86.002)
N1: (57.025,144.132,89.012)
O4: (54.516,143.336,92.056)
O2: (55.233,145.089,87.952)
C6: (57.505,143.528,90.152)
C5: (56.729,143.235,91.196)
O3': (60.150,147.045,86.964)
C2: (58.251,137.611,96.502)
OP1: (63.338,143.342,95.550)
OP2: (63.572,141.449,97.261)
C4: (59.944,136.729,97.829)
O5': (61.986,141.249,95.376)
C3': (59.119,141.653,95.366)
C1': (58.716,139.391,94.842)
O4': (59.840,139.825,94.095)
C5': (61.367,141.682,94.155)
P: (63.351,141.897,95.867)
O2: (57.067,137.651,96.129)
C4': (59.920,141.270,94.135)
C2': (57.985,140.642,95.333)
O2': (56.997,140.997,94.390)
N1: (59.178,138.475,95.908)
N3: (58.665,136.752,97.462)
N4: (60.309,135.849,98.762)
C6: (60.488,138.452,96.306)
C5: (60.908,137.601,97.252)
O3': (58.639,142.986,95.273)
OP1: (63.338,143.342,95.550)
OP2: (63.572,141.449,97.261)
C4: (59.944,136.729,97.829)
O5': (61.986,141.249,95.376)
C3': (59.119,141.653,95.366)
C1': (58.716,139.391,94.842)
O4': (59.840,139.825,94.095)
C5': (61.367,141.682,94.155)
P: (63.351,141.897,95.867)
O2: (57.067,137.651,96.129)
C4': (59.920,141.270,94.135)
C2': (57.985,140.642,95.333)
O2': (56.997,140.997,94.390)
N1: (59.178,138.475,95.908)
N3: (58.665,136.752,97.462)
N4: (60.309,135.849,98.762)
C6: (60.488,138.452,96.306)
C5: (60.908,137.601,97.252)
O3': (58.639,142.986,95.273)
Image (generated by PyMOL):