Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2ZJR:X478:X474
Extra
PDB:
ATOM 1 O3' A A 477 -6.587 87.665 94.983 1.00 86.39 O
ATOM 2 P U A 478 -6.325 86.354 94.090 1.00 90.84 P
ATOM 3 OP1 U A 478 -5.306 86.622 93.048 1.00 90.93 O
ATOM 4 OP2 U A 478 -7.579 85.895 93.453 1.00 90.05 O
ATOM 5 O5' U A 478 -5.785 85.244 95.126 1.00 92.99 O
ATOM 6 C5' U A 478 -6.305 83.897 95.095 1.00 96.42 C
ATOM 7 C4' U A 478 -5.426 82.946 95.886 1.00 99.88 C
ATOM 8 O4' U A 478 -5.490 83.316 97.295 1.00101.37 O
ATOM 9 C3' U A 478 -5.774 81.464 95.820 1.00101.36 C
ATOM 10 O3' U A 478 -5.233 80.745 94.633 1.00102.37 O
ATOM 11 C2' U A 478 -5.276 81.002 97.242 1.00101.91 C
ATOM 12 O2' U A 478 -4.087 80.231 97.117 1.00100.94 O
ATOM 13 C1' U A 478 -5.099 82.269 98.194 1.00102.38 C
ATOM 14 N1 U A 478 -5.586 82.788 99.587 1.00103.50 N
ATOM 15 C2 U A 478 -5.386 82.062 100.752 1.00103.84 C
ATOM 16 O2 U A 478 -4.676 81.083 100.732 1.00103.98 O
ATOM 17 N3 U A 478 -6.023 82.493 101.909 1.00103.66 N
ATOM 18 C4 U A 478 -6.825 83.584 102.110 1.00103.22 C
ATOM 19 O4 U A 478 -7.371 83.855 103.187 1.00103.20 O
ATOM 20 C5 U A 478 -6.954 84.363 100.909 1.00103.25 C
ATOM 21 C6 U A 478 -6.351 83.948 99.762 1.00103.21 C
ATOM 22 P G A 479 -6.083 80.096 93.387 1.00103.46 P
ATOM 23 OP1 G A 479 -6.823 81.153 92.645 1.00102.34 O
ATOM 24 OP2 G A 479 -7.020 79.057 93.873 1.00102.97 O
ATOM 25 O5' G A 479 -4.892 79.412 92.493 1.00103.23 O
TER
ATOM 1 O3' C B 473 -4.531 86.489 108.303 1.00 38.73 O
ATOM 2 P C B 474 -5.851 86.318 107.449 1.00 41.44 P
ATOM 3 OP1 C B 474 -7.034 86.726 108.224 1.00 42.75 O
ATOM 4 OP2 C B 474 -5.994 84.934 106.967 1.00 42.10 O
ATOM 5 O5' C B 474 -5.610 87.309 106.207 1.00 41.73 O
ATOM 6 C5' C B 474 -6.529 87.242 105.105 1.00 43.35 C
ATOM 7 C4' C B 474 -5.813 87.544 103.799 1.00 48.42 C
ATOM 8 O4' C B 474 -4.552 86.823 103.783 1.00 46.04 O
ATOM 9 C3' C B 474 -6.449 87.072 102.499 1.00 51.20 C
ATOM 10 O3' C B 474 -7.422 87.971 101.971 1.00 56.76 O
ATOM 11 C2' C B 474 -5.275 86.898 101.524 1.00 50.05 C
ATOM 12 O2' C B 474 -5.045 88.079 100.752 1.00 46.59 O
ATOM 13 C1' C B 474 -4.119 86.549 102.454 1.00 47.12 C
ATOM 14 N1 C B 474 -3.686 85.136 102.379 1.00 45.00 N
ATOM 15 C2 C B 474 -3.017 84.736 101.277 1.00 44.87 C
ATOM 16 O2 C B 474 -2.817 85.534 100.352 1.00 46.59 O
ATOM 17 N3 C B 474 -2.580 83.464 101.213 1.00 45.69 N
ATOM 18 C4 C B 474 -2.825 82.626 102.221 1.00 46.33 C
ATOM 19 N4 C B 474 -2.347 81.378 102.096 1.00 45.37 N
ATOM 20 C5 C B 474 -3.567 83.029 103.373 1.00 45.72 C
ATOM 21 C6 C B 474 -3.962 84.295 103.392 1.00 44.33 C
ATOM 22 P U B 475 -8.595 88.615 102.818 1.00 60.66 P
ATOM 23 OP1 U B 475 -8.660 88.048 104.195 1.00 60.78 O
ATOM 24 OP2 U B 475 -9.900 88.441 102.149 1.00 60.03 O
ATOM 25 O5' U B 475 -8.160 90.180 102.851 1.00 62.53 O
TER
ATOM 2 P U A 478 -6.325 86.354 94.090 1.00 90.84 P
ATOM 3 OP1 U A 478 -5.306 86.622 93.048 1.00 90.93 O
ATOM 4 OP2 U A 478 -7.579 85.895 93.453 1.00 90.05 O
ATOM 5 O5' U A 478 -5.785 85.244 95.126 1.00 92.99 O
ATOM 6 C5' U A 478 -6.305 83.897 95.095 1.00 96.42 C
ATOM 7 C4' U A 478 -5.426 82.946 95.886 1.00 99.88 C
ATOM 8 O4' U A 478 -5.490 83.316 97.295 1.00101.37 O
ATOM 9 C3' U A 478 -5.774 81.464 95.820 1.00101.36 C
ATOM 10 O3' U A 478 -5.233 80.745 94.633 1.00102.37 O
ATOM 11 C2' U A 478 -5.276 81.002 97.242 1.00101.91 C
ATOM 12 O2' U A 478 -4.087 80.231 97.117 1.00100.94 O
ATOM 13 C1' U A 478 -5.099 82.269 98.194 1.00102.38 C
ATOM 14 N1 U A 478 -5.586 82.788 99.587 1.00103.50 N
ATOM 15 C2 U A 478 -5.386 82.062 100.752 1.00103.84 C
ATOM 16 O2 U A 478 -4.676 81.083 100.732 1.00103.98 O
ATOM 17 N3 U A 478 -6.023 82.493 101.909 1.00103.66 N
ATOM 18 C4 U A 478 -6.825 83.584 102.110 1.00103.22 C
ATOM 19 O4 U A 478 -7.371 83.855 103.187 1.00103.20 O
ATOM 20 C5 U A 478 -6.954 84.363 100.909 1.00103.25 C
ATOM 21 C6 U A 478 -6.351 83.948 99.762 1.00103.21 C
ATOM 22 P G A 479 -6.083 80.096 93.387 1.00103.46 P
ATOM 23 OP1 G A 479 -6.823 81.153 92.645 1.00102.34 O
ATOM 24 OP2 G A 479 -7.020 79.057 93.873 1.00102.97 O
ATOM 25 O5' G A 479 -4.892 79.412 92.493 1.00103.23 O
TER
ATOM 1 O3' C B 473 -4.531 86.489 108.303 1.00 38.73 O
ATOM 2 P C B 474 -5.851 86.318 107.449 1.00 41.44 P
ATOM 3 OP1 C B 474 -7.034 86.726 108.224 1.00 42.75 O
ATOM 4 OP2 C B 474 -5.994 84.934 106.967 1.00 42.10 O
ATOM 5 O5' C B 474 -5.610 87.309 106.207 1.00 41.73 O
ATOM 6 C5' C B 474 -6.529 87.242 105.105 1.00 43.35 C
ATOM 7 C4' C B 474 -5.813 87.544 103.799 1.00 48.42 C
ATOM 8 O4' C B 474 -4.552 86.823 103.783 1.00 46.04 O
ATOM 9 C3' C B 474 -6.449 87.072 102.499 1.00 51.20 C
ATOM 10 O3' C B 474 -7.422 87.971 101.971 1.00 56.76 O
ATOM 11 C2' C B 474 -5.275 86.898 101.524 1.00 50.05 C
ATOM 12 O2' C B 474 -5.045 88.079 100.752 1.00 46.59 O
ATOM 13 C1' C B 474 -4.119 86.549 102.454 1.00 47.12 C
ATOM 14 N1 C B 474 -3.686 85.136 102.379 1.00 45.00 N
ATOM 15 C2 C B 474 -3.017 84.736 101.277 1.00 44.87 C
ATOM 16 O2 C B 474 -2.817 85.534 100.352 1.00 46.59 O
ATOM 17 N3 C B 474 -2.580 83.464 101.213 1.00 45.69 N
ATOM 18 C4 C B 474 -2.825 82.626 102.221 1.00 46.33 C
ATOM 19 N4 C B 474 -2.347 81.378 102.096 1.00 45.37 N
ATOM 20 C5 C B 474 -3.567 83.029 103.373 1.00 45.72 C
ATOM 21 C6 C B 474 -3.962 84.295 103.392 1.00 44.33 C
ATOM 22 P U B 475 -8.595 88.615 102.818 1.00 60.66 P
ATOM 23 OP1 U B 475 -8.660 88.048 104.195 1.00 60.78 O
ATOM 24 OP2 U B 475 -9.900 88.441 102.149 1.00 60.03 O
ATOM 25 O5' U B 475 -8.160 90.180 102.851 1.00 62.53 O
TER
Atoms:
C4: (-6.825,83.584,102.110)
N3: (-6.023,82.493,101.909)
OP1: (-5.306,86.622,93.048)
OP2: (-7.579,85.895,93.453)
C2: (-5.386,82.062,100.752)
C1': (-5.099,82.269,98.194)
C3': (-5.774,81.464,95.820)
O5': (-5.785,85.244,95.126)
O4': (-5.490,83.316,97.295)
C5': (-6.305,83.897,95.095)
P: (-6.325,86.354,94.090)
C4': (-5.426,82.946,95.886)
C2': (-5.276,81.002,97.242)
O2': (-4.087,80.231,97.117)
N1: (-5.586,82.788,99.587)
O4: (-7.371,83.855,103.187)
O2: (-4.676,81.083,100.732)
C6: (-6.351,83.948,99.762)
C5: (-6.954,84.363,100.909)
O3': (-5.233,80.745,94.633)
N3: (-6.023,82.493,101.909)
OP1: (-5.306,86.622,93.048)
OP2: (-7.579,85.895,93.453)
C2: (-5.386,82.062,100.752)
C1': (-5.099,82.269,98.194)
C3': (-5.774,81.464,95.820)
O5': (-5.785,85.244,95.126)
O4': (-5.490,83.316,97.295)
C5': (-6.305,83.897,95.095)
P: (-6.325,86.354,94.090)
C4': (-5.426,82.946,95.886)
C2': (-5.276,81.002,97.242)
O2': (-4.087,80.231,97.117)
N1: (-5.586,82.788,99.587)
O4: (-7.371,83.855,103.187)
O2: (-4.676,81.083,100.732)
C6: (-6.351,83.948,99.762)
C5: (-6.954,84.363,100.909)
O3': (-5.233,80.745,94.633)
C2: (-3.017,84.736,101.277)
OP1: (-7.034,86.726,108.224)
OP2: (-5.994,84.934,106.967)
C4: (-2.825,82.626,102.221)
O5': (-5.610,87.309,106.207)
C3': (-6.449,87.072,102.499)
C1': (-4.119,86.549,102.454)
O4': (-4.552,86.823,103.783)
C5': (-6.529,87.242,105.105)
P: (-5.851,86.318,107.449)
O2: (-2.817,85.534,100.352)
C4': (-5.813,87.544,103.799)
C2': (-5.275,86.898,101.524)
O2': (-5.045,88.079,100.752)
N1: (-3.686,85.136,102.379)
N3: (-2.580,83.464,101.213)
N4: (-2.347,81.378,102.096)
C6: (-3.962,84.295,103.392)
C5: (-3.567,83.029,103.373)
O3': (-7.422,87.971,101.971)
OP1: (-7.034,86.726,108.224)
OP2: (-5.994,84.934,106.967)
C4: (-2.825,82.626,102.221)
O5': (-5.610,87.309,106.207)
C3': (-6.449,87.072,102.499)
C1': (-4.119,86.549,102.454)
O4': (-4.552,86.823,103.783)
C5': (-6.529,87.242,105.105)
P: (-5.851,86.318,107.449)
O2: (-2.817,85.534,100.352)
C4': (-5.813,87.544,103.799)
C2': (-5.275,86.898,101.524)
O2': (-5.045,88.079,100.752)
N1: (-3.686,85.136,102.379)
N3: (-2.580,83.464,101.213)
N4: (-2.347,81.378,102.096)
C6: (-3.962,84.295,103.392)
C5: (-3.567,83.029,103.373)
O3': (-7.422,87.971,101.971)
Image (generated by PyMOL):