Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:C11:A3
Extra
PDB:
ATOM 1 O3' U A 10 27.198 23.241 51.195 1.00 56.76 O
ATOM 2 P U A 11 26.962 24.811 51.393 1.00 56.83 P
ATOM 3 OP1 U A 11 26.966 25.025 52.844 1.00 50.64 O
ATOM 4 OP2 U A 11 25.838 25.315 50.582 1.00 54.20 O
ATOM 5 O5' U A 11 28.336 25.381 50.851 1.00 53.16 O
ATOM 6 C5' U A 11 28.556 26.753 50.653 1.00 56.08 C
ATOM 7 C4' U A 11 29.085 26.979 49.263 1.00 58.84 C
ATOM 8 O4' U A 11 30.228 26.127 49.030 1.00 53.91 O
ATOM 9 C3' U A 11 28.034 26.529 48.251 1.00 59.10 C
ATOM 10 O3' U A 11 28.202 27.302 47.085 1.00 66.34 O
ATOM 11 C2' U A 11 28.430 25.115 47.869 1.00 58.41 C
ATOM 12 O2' U A 11 28.222 24.832 46.524 1.00 62.25 O
ATOM 13 C1' U A 11 29.929 25.190 48.029 1.00 56.69 C
ATOM 14 N1 U A 11 30.650 23.938 48.222 1.00 57.84 N
ATOM 15 C2 U A 11 31.521 23.550 47.235 1.00 57.39 C
ATOM 16 O2 U A 11 31.735 24.213 46.243 1.00 60.32 O
ATOM 17 N3 U A 11 32.148 22.359 47.455 1.00 55.06 N
ATOM 18 C4 U A 11 32.017 21.544 48.540 1.00 57.17 C
ATOM 19 O4 U A 11 32.766 20.574 48.660 1.00 59.74 O
ATOM 20 C5 U A 11 31.093 22.014 49.517 1.00 60.19 C
ATOM 21 C6 U A 11 30.467 23.166 49.329 1.00 57.82 C
ATOM 22 P A A 12 27.097 28.320 46.570 1.00 67.17 P
ATOM 23 OP1 A A 12 27.023 29.421 47.519 1.00 67.09 O
ATOM 24 OP2 A A 12 25.848 27.590 46.159 1.00 64.65 O
ATOM 25 O5' A A 12 27.867 28.839 45.279 1.00 65.33 O
TER
ATOM 1 O3' C B 2 27.875 25.168 57.254 1.00 55.96 O
ATOM 2 P C B 3 28.010 23.676 57.841 1.00 54.71 P
ATOM 3 OP1 C B 3 26.669 23.248 58.267 1.00 65.86 O
ATOM 4 OP2 C B 3 29.139 23.646 58.796 1.00 53.56 O
ATOM 5 O5' C B 3 28.507 22.781 56.623 1.00 57.62 O
ATOM 6 C5' C B 3 27.736 22.666 55.470 1.00 48.86 C
ATOM 7 C4' C B 3 28.547 22.142 54.306 1.00 54.86 C
ATOM 8 O4' C B 3 29.685 23.000 54.067 1.00 52.46 O
ATOM 9 C3' C B 3 29.188 20.783 54.496 1.00 51.34 C
ATOM 10 O3' C B 3 28.237 19.742 54.200 1.00 57.79 O
ATOM 11 C2' C B 3 30.282 20.820 53.433 1.00 54.41 C
ATOM 12 O2' C B 3 29.774 20.655 52.146 1.00 52.06 O
ATOM 13 C1' C B 3 30.726 22.260 53.487 1.00 50.72 C
ATOM 14 N1 C B 3 32.021 22.505 54.119 1.00 50.61 N
ATOM 15 C2 C B 3 33.126 22.298 53.335 1.00 52.74 C
ATOM 16 O2 C B 3 32.943 21.990 52.161 1.00 53.00 O
ATOM 17 N3 C B 3 34.368 22.438 53.851 1.00 49.17 N
ATOM 18 C4 C B 3 34.516 22.796 55.116 1.00 51.70 C
ATOM 19 N4 C B 3 35.763 22.907 55.581 1.00 51.67 N
ATOM 20 C5 C B 3 33.395 23.053 55.960 1.00 49.23 C
ATOM 21 C6 C B 3 32.170 22.895 55.417 1.00 47.51 C
TER
ATOM 2 P U A 11 26.962 24.811 51.393 1.00 56.83 P
ATOM 3 OP1 U A 11 26.966 25.025 52.844 1.00 50.64 O
ATOM 4 OP2 U A 11 25.838 25.315 50.582 1.00 54.20 O
ATOM 5 O5' U A 11 28.336 25.381 50.851 1.00 53.16 O
ATOM 6 C5' U A 11 28.556 26.753 50.653 1.00 56.08 C
ATOM 7 C4' U A 11 29.085 26.979 49.263 1.00 58.84 C
ATOM 8 O4' U A 11 30.228 26.127 49.030 1.00 53.91 O
ATOM 9 C3' U A 11 28.034 26.529 48.251 1.00 59.10 C
ATOM 10 O3' U A 11 28.202 27.302 47.085 1.00 66.34 O
ATOM 11 C2' U A 11 28.430 25.115 47.869 1.00 58.41 C
ATOM 12 O2' U A 11 28.222 24.832 46.524 1.00 62.25 O
ATOM 13 C1' U A 11 29.929 25.190 48.029 1.00 56.69 C
ATOM 14 N1 U A 11 30.650 23.938 48.222 1.00 57.84 N
ATOM 15 C2 U A 11 31.521 23.550 47.235 1.00 57.39 C
ATOM 16 O2 U A 11 31.735 24.213 46.243 1.00 60.32 O
ATOM 17 N3 U A 11 32.148 22.359 47.455 1.00 55.06 N
ATOM 18 C4 U A 11 32.017 21.544 48.540 1.00 57.17 C
ATOM 19 O4 U A 11 32.766 20.574 48.660 1.00 59.74 O
ATOM 20 C5 U A 11 31.093 22.014 49.517 1.00 60.19 C
ATOM 21 C6 U A 11 30.467 23.166 49.329 1.00 57.82 C
ATOM 22 P A A 12 27.097 28.320 46.570 1.00 67.17 P
ATOM 23 OP1 A A 12 27.023 29.421 47.519 1.00 67.09 O
ATOM 24 OP2 A A 12 25.848 27.590 46.159 1.00 64.65 O
ATOM 25 O5' A A 12 27.867 28.839 45.279 1.00 65.33 O
TER
ATOM 1 O3' C B 2 27.875 25.168 57.254 1.00 55.96 O
ATOM 2 P C B 3 28.010 23.676 57.841 1.00 54.71 P
ATOM 3 OP1 C B 3 26.669 23.248 58.267 1.00 65.86 O
ATOM 4 OP2 C B 3 29.139 23.646 58.796 1.00 53.56 O
ATOM 5 O5' C B 3 28.507 22.781 56.623 1.00 57.62 O
ATOM 6 C5' C B 3 27.736 22.666 55.470 1.00 48.86 C
ATOM 7 C4' C B 3 28.547 22.142 54.306 1.00 54.86 C
ATOM 8 O4' C B 3 29.685 23.000 54.067 1.00 52.46 O
ATOM 9 C3' C B 3 29.188 20.783 54.496 1.00 51.34 C
ATOM 10 O3' C B 3 28.237 19.742 54.200 1.00 57.79 O
ATOM 11 C2' C B 3 30.282 20.820 53.433 1.00 54.41 C
ATOM 12 O2' C B 3 29.774 20.655 52.146 1.00 52.06 O
ATOM 13 C1' C B 3 30.726 22.260 53.487 1.00 50.72 C
ATOM 14 N1 C B 3 32.021 22.505 54.119 1.00 50.61 N
ATOM 15 C2 C B 3 33.126 22.298 53.335 1.00 52.74 C
ATOM 16 O2 C B 3 32.943 21.990 52.161 1.00 53.00 O
ATOM 17 N3 C B 3 34.368 22.438 53.851 1.00 49.17 N
ATOM 18 C4 C B 3 34.516 22.796 55.116 1.00 51.70 C
ATOM 19 N4 C B 3 35.763 22.907 55.581 1.00 51.67 N
ATOM 20 C5 C B 3 33.395 23.053 55.960 1.00 49.23 C
ATOM 21 C6 C B 3 32.170 22.895 55.417 1.00 47.51 C
TER
Atoms:
C4: (32.017,21.544,48.540)
N3: (32.148,22.359,47.455)
OP1: (26.966,25.025,52.844)
OP2: (25.838,25.315,50.582)
C2: (31.521,23.550,47.235)
C1': (29.929,25.190,48.029)
C3': (28.034,26.529,48.251)
O5': (28.336,25.381,50.851)
O4': (30.228,26.127,49.030)
C5': (28.556,26.753,50.653)
P: (26.962,24.811,51.393)
C4': (29.085,26.979,49.263)
C2': (28.430,25.115,47.869)
O2': (28.222,24.832,46.524)
N1: (30.650,23.938,48.222)
O4: (32.766,20.574,48.660)
O2: (31.735,24.213,46.243)
C6: (30.467,23.166,49.329)
C5: (31.093,22.014,49.517)
O3': (28.202,27.302,47.085)
N3: (32.148,22.359,47.455)
OP1: (26.966,25.025,52.844)
OP2: (25.838,25.315,50.582)
C2: (31.521,23.550,47.235)
C1': (29.929,25.190,48.029)
C3': (28.034,26.529,48.251)
O5': (28.336,25.381,50.851)
O4': (30.228,26.127,49.030)
C5': (28.556,26.753,50.653)
P: (26.962,24.811,51.393)
C4': (29.085,26.979,49.263)
C2': (28.430,25.115,47.869)
O2': (28.222,24.832,46.524)
N1: (30.650,23.938,48.222)
O4: (32.766,20.574,48.660)
O2: (31.735,24.213,46.243)
C6: (30.467,23.166,49.329)
C5: (31.093,22.014,49.517)
O3': (28.202,27.302,47.085)
C2: (33.126,22.298,53.335)
OP1: (26.669,23.248,58.267)
OP2: (29.139,23.646,58.796)
C4: (34.516,22.796,55.116)
O5': (28.507,22.781,56.623)
C3': (29.188,20.783,54.496)
C1': (30.726,22.260,53.487)
O4': (29.685,23.000,54.067)
C5': (27.736,22.666,55.470)
P: (28.010,23.676,57.841)
O2: (32.943,21.990,52.161)
C4': (28.547,22.142,54.306)
C2': (30.282,20.820,53.433)
O2': (29.774,20.655,52.146)
N1: (32.021,22.505,54.119)
N3: (34.368,22.438,53.851)
N4: (35.763,22.907,55.581)
C6: (32.170,22.895,55.417)
C5: (33.395,23.053,55.960)
O3': (28.237,19.742,54.200)
OP1: (26.669,23.248,58.267)
OP2: (29.139,23.646,58.796)
C4: (34.516,22.796,55.116)
O5': (28.507,22.781,56.623)
C3': (29.188,20.783,54.496)
C1': (30.726,22.260,53.487)
O4': (29.685,23.000,54.067)
C5': (27.736,22.666,55.470)
P: (28.010,23.676,57.841)
O2: (32.943,21.990,52.161)
C4': (28.547,22.142,54.306)
C2': (30.282,20.820,53.433)
O2': (29.774,20.655,52.146)
N1: (32.021,22.505,54.119)
N3: (34.368,22.438,53.851)
N4: (35.763,22.907,55.581)
C6: (32.170,22.895,55.417)
C5: (33.395,23.053,55.960)
O3': (28.237,19.742,54.200)
Image (generated by PyMOL):