Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A10:A38
Extra
PDB:
ATOM 1 O3' A A 9 21.522 11.266 7.446 1.00 22.34 O
ATOM 2 P U A 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 3 OP1 U A 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 4 OP2 U A 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 5 O5' U A 10 23.092 11.168 5.463 1.00 23.61 O
ATOM 6 C5' U A 10 23.019 10.042 4.594 1.00 24.83 C
ATOM 7 C4' U A 10 22.435 10.453 3.257 1.00 24.96 C
ATOM 8 O4' U A 10 21.044 10.836 3.451 1.00 25.18 O
ATOM 9 C3' U A 10 23.045 11.676 2.581 1.00 24.84 C
ATOM 10 O3' U A 10 24.219 11.364 1.833 1.00 25.54 O
ATOM 11 C2' U A 10 21.919 12.091 1.648 1.00 25.10 C
ATOM 12 O2' U A 10 21.818 11.262 0.508 1.00 25.34 O
ATOM 13 C1' U A 10 20.703 11.876 2.548 1.00 24.64 C
ATOM 14 N1 U A 10 20.360 13.082 3.317 1.00 24.32 N
ATOM 15 C2 U A 10 19.818 14.143 2.617 1.00 24.57 C
ATOM 16 O2 U A 10 19.614 14.108 1.414 1.00 24.57 O
ATOM 17 N3 U A 10 19.523 15.249 3.372 1.00 24.15 N
ATOM 18 C4 U A 10 19.713 15.403 4.727 1.00 23.79 C
ATOM 19 O4 U A 10 19.411 16.472 5.259 1.00 22.92 O
ATOM 20 C5 U A 10 20.274 14.261 5.386 1.00 23.23 C
ATOM 21 C6 U A 10 20.570 13.164 4.675 1.00 24.20 C
ATOM 22 P C A 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 23 OP1 C A 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 24 OP2 C A 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 25 O5' C A 11 24.614 13.418 0.378 1.00 25.47 O
TER
ATOM 1 O3' A B 37 16.314 16.938 13.631 1.00 27.76 O
ATOM 2 P C B 38 17.561 17.938 13.467 1.00 28.75 P
ATOM 3 OP1 C B 38 18.318 17.916 14.742 1.00 28.99 O
ATOM 4 OP2 C B 38 17.058 19.228 12.932 1.00 28.28 O
ATOM 5 O5' C B 38 18.463 17.270 12.339 1.00 27.31 O
ATOM 6 C5' C B 38 19.181 16.068 12.593 1.00 25.81 C
ATOM 7 C4' C B 38 19.530 15.390 11.290 1.00 25.10 C
ATOM 8 O4' C B 38 18.297 15.094 10.585 1.00 24.66 O
ATOM 9 C3' C B 38 20.333 16.227 10.302 1.00 25.27 C
ATOM 10 O3' C B 38 21.732 16.095 10.546 1.00 26.02 O
ATOM 11 C2' C B 38 19.984 15.553 8.980 1.00 24.27 C
ATOM 12 O2' C B 38 20.720 14.361 8.792 1.00 22.99 O
ATOM 13 C1' C B 38 18.506 15.215 9.187 1.00 24.68 C
ATOM 14 N1 C B 38 17.587 16.242 8.667 1.00 24.72 N
ATOM 15 C2 C B 38 16.968 16.029 7.428 1.00 24.43 C
ATOM 16 O2 C B 38 17.187 14.968 6.821 1.00 23.68 O
ATOM 17 N3 C B 38 16.143 16.979 6.929 1.00 24.22 N
ATOM 18 C4 C B 38 15.919 18.099 7.621 1.00 24.39 C
ATOM 19 N4 C B 38 15.105 19.014 7.084 1.00 23.14 N
ATOM 20 C5 C B 38 16.521 18.334 8.893 1.00 24.70 C
ATOM 21 C6 C B 38 17.342 17.388 9.373 1.00 24.51 C
ATOM 22 P C B 39 22.534 17.261 11.314 1.00 27.90 P
ATOM 23 OP1 C B 39 21.564 18.202 11.928 1.00 29.60 O
ATOM 24 OP2 C B 39 23.553 17.778 10.369 1.00 28.36 O
ATOM 25 O5' C B 39 23.316 16.465 12.454 1.00 28.51 O
TER
ATOM 2 P U A 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 3 OP1 U A 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 4 OP2 U A 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 5 O5' U A 10 23.092 11.168 5.463 1.00 23.61 O
ATOM 6 C5' U A 10 23.019 10.042 4.594 1.00 24.83 C
ATOM 7 C4' U A 10 22.435 10.453 3.257 1.00 24.96 C
ATOM 8 O4' U A 10 21.044 10.836 3.451 1.00 25.18 O
ATOM 9 C3' U A 10 23.045 11.676 2.581 1.00 24.84 C
ATOM 10 O3' U A 10 24.219 11.364 1.833 1.00 25.54 O
ATOM 11 C2' U A 10 21.919 12.091 1.648 1.00 25.10 C
ATOM 12 O2' U A 10 21.818 11.262 0.508 1.00 25.34 O
ATOM 13 C1' U A 10 20.703 11.876 2.548 1.00 24.64 C
ATOM 14 N1 U A 10 20.360 13.082 3.317 1.00 24.32 N
ATOM 15 C2 U A 10 19.818 14.143 2.617 1.00 24.57 C
ATOM 16 O2 U A 10 19.614 14.108 1.414 1.00 24.57 O
ATOM 17 N3 U A 10 19.523 15.249 3.372 1.00 24.15 N
ATOM 18 C4 U A 10 19.713 15.403 4.727 1.00 23.79 C
ATOM 19 O4 U A 10 19.411 16.472 5.259 1.00 22.92 O
ATOM 20 C5 U A 10 20.274 14.261 5.386 1.00 23.23 C
ATOM 21 C6 U A 10 20.570 13.164 4.675 1.00 24.20 C
ATOM 22 P C A 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 23 OP1 C A 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 24 OP2 C A 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 25 O5' C A 11 24.614 13.418 0.378 1.00 25.47 O
TER
ATOM 1 O3' A B 37 16.314 16.938 13.631 1.00 27.76 O
ATOM 2 P C B 38 17.561 17.938 13.467 1.00 28.75 P
ATOM 3 OP1 C B 38 18.318 17.916 14.742 1.00 28.99 O
ATOM 4 OP2 C B 38 17.058 19.228 12.932 1.00 28.28 O
ATOM 5 O5' C B 38 18.463 17.270 12.339 1.00 27.31 O
ATOM 6 C5' C B 38 19.181 16.068 12.593 1.00 25.81 C
ATOM 7 C4' C B 38 19.530 15.390 11.290 1.00 25.10 C
ATOM 8 O4' C B 38 18.297 15.094 10.585 1.00 24.66 O
ATOM 9 C3' C B 38 20.333 16.227 10.302 1.00 25.27 C
ATOM 10 O3' C B 38 21.732 16.095 10.546 1.00 26.02 O
ATOM 11 C2' C B 38 19.984 15.553 8.980 1.00 24.27 C
ATOM 12 O2' C B 38 20.720 14.361 8.792 1.00 22.99 O
ATOM 13 C1' C B 38 18.506 15.215 9.187 1.00 24.68 C
ATOM 14 N1 C B 38 17.587 16.242 8.667 1.00 24.72 N
ATOM 15 C2 C B 38 16.968 16.029 7.428 1.00 24.43 C
ATOM 16 O2 C B 38 17.187 14.968 6.821 1.00 23.68 O
ATOM 17 N3 C B 38 16.143 16.979 6.929 1.00 24.22 N
ATOM 18 C4 C B 38 15.919 18.099 7.621 1.00 24.39 C
ATOM 19 N4 C B 38 15.105 19.014 7.084 1.00 23.14 N
ATOM 20 C5 C B 38 16.521 18.334 8.893 1.00 24.70 C
ATOM 21 C6 C B 38 17.342 17.388 9.373 1.00 24.51 C
ATOM 22 P C B 39 22.534 17.261 11.314 1.00 27.90 P
ATOM 23 OP1 C B 39 21.564 18.202 11.928 1.00 29.60 O
ATOM 24 OP2 C B 39 23.553 17.778 10.369 1.00 28.36 O
ATOM 25 O5' C B 39 23.316 16.465 12.454 1.00 28.51 O
TER
Atoms:
C4: (19.713,15.403,4.727)
N3: (19.523,15.249,3.372)
OP1: (23.436,9.627,7.448)
OP2: (23.850,12.152,7.582)
C2: (19.818,14.143,2.617)
C1': (20.703,11.876,2.548)
C3': (23.045,11.676,2.581)
O5': (23.092,11.168,5.463)
O4': (21.044,10.836,3.451)
C5': (23.019,10.042,4.594)
P: (23.067,11.010,7.050)
C4': (22.435,10.453,3.257)
C2': (21.919,12.091,1.648)
O2': (21.818,11.262,0.508)
N1: (20.360,13.082,3.317)
O4: (19.411,16.472,5.259)
O2: (19.614,14.108,1.414)
C6: (20.570,13.164,4.675)
C5: (20.274,14.261,5.386)
O3': (24.219,11.364,1.833)
N3: (19.523,15.249,3.372)
OP1: (23.436,9.627,7.448)
OP2: (23.850,12.152,7.582)
C2: (19.818,14.143,2.617)
C1': (20.703,11.876,2.548)
C3': (23.045,11.676,2.581)
O5': (23.092,11.168,5.463)
O4': (21.044,10.836,3.451)
C5': (23.019,10.042,4.594)
P: (23.067,11.010,7.050)
C4': (22.435,10.453,3.257)
C2': (21.919,12.091,1.648)
O2': (21.818,11.262,0.508)
N1: (20.360,13.082,3.317)
O4: (19.411,16.472,5.259)
O2: (19.614,14.108,1.414)
C6: (20.570,13.164,4.675)
C5: (20.274,14.261,5.386)
O3': (24.219,11.364,1.833)
C2: (16.968,16.029,7.428)
OP1: (18.318,17.916,14.742)
OP2: (17.058,19.228,12.932)
C4: (15.919,18.099,7.621)
O5': (18.463,17.270,12.339)
C3': (20.333,16.227,10.302)
C1': (18.506,15.215,9.187)
O4': (18.297,15.094,10.585)
C5': (19.181,16.068,12.593)
P: (17.561,17.938,13.467)
O2: (17.187,14.968,6.821)
C4': (19.530,15.390,11.290)
C2': (19.984,15.553,8.980)
O2': (20.720,14.361,8.792)
N1: (17.587,16.242,8.667)
N3: (16.143,16.979,6.929)
N4: (15.105,19.014,7.084)
C6: (17.342,17.388,9.373)
C5: (16.521,18.334,8.893)
O3': (21.732,16.095,10.546)
OP1: (18.318,17.916,14.742)
OP2: (17.058,19.228,12.932)
C4: (15.919,18.099,7.621)
O5': (18.463,17.270,12.339)
C3': (20.333,16.227,10.302)
C1': (18.506,15.215,9.187)
O4': (18.297,15.094,10.585)
C5': (19.181,16.068,12.593)
P: (17.561,17.938,13.467)
O2: (17.187,14.968,6.821)
C4': (19.530,15.390,11.290)
C2': (19.984,15.553,8.980)
O2': (20.720,14.361,8.792)
N1: (17.587,16.242,8.667)
N3: (16.143,16.979,6.929)
N4: (15.105,19.014,7.084)
C6: (17.342,17.388,9.373)
C5: (16.521,18.334,8.893)
O3': (21.732,16.095,10.546)
Image (generated by PyMOL):