ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GOG:A9:A37

Extra

PDB:
ATOM 1 O3' A A 8 21.662 13.464 7.465 1.00 33.45 O
ATOM 2 P U A 9 23.167 13.234 6.923 1.00 34.24 P
ATOM 3 OP1 U A 9 23.657 11.880 7.303 1.00 33.84 O
ATOM 4 OP2 U A 9 23.950 14.436 7.343 1.00 35.23 O
ATOM 5 O5' U A 9 23.013 13.365 5.341 1.00 34.85 O
ATOM 6 C5' U A 9 23.109 12.241 4.474 1.00 36.54 C
ATOM 7 C4' U A 9 22.562 12.602 3.106 1.00 37.81 C
ATOM 8 O4' U A 9 21.167 13.019 3.235 1.00 37.87 O
ATOM 9 C3' U A 9 23.230 13.795 2.438 1.00 37.94 C
ATOM 10 O3' U A 9 24.426 13.431 1.747 1.00 39.96 O
ATOM 11 C2' U A 9 22.146 14.259 1.474 1.00 37.81 C
ATOM 12 O2' U A 9 22.046 13.448 0.318 1.00 37.42 O
ATOM 13 C1' U A 9 20.897 14.087 2.334 1.00 36.75 C
ATOM 14 N1 U A 9 20.544 15.291 3.106 1.00 36.42 N
ATOM 15 C2 U A 9 19.919 16.334 2.433 1.00 36.46 C
ATOM 16 O2 U A 9 19.664 16.302 1.242 1.00 37.45 O
ATOM 17 N3 U A 9 19.604 17.423 3.206 1.00 35.87 N
ATOM 18 C4 U A 9 19.846 17.585 4.554 1.00 35.55 C
ATOM 19 O4 U A 9 19.538 18.646 5.101 1.00 34.94 O
ATOM 20 C5 U A 9 20.496 16.473 5.179 1.00 35.62 C
ATOM 21 C6 U A 9 20.816 15.389 4.450 1.00 36.75 C
ATOM 22 P C A 10 25.531 14.561 1.425 1.00 40.15 P
ATOM 23 OP1 C A 10 26.727 13.894 0.856 1.00 40.62 O
ATOM 24 OP2 C A 10 25.661 15.381 2.656 1.00 41.33 O
ATOM 25 O5' C A 10 24.855 15.493 0.319 1.00 39.83 O
TER

ATOM 1 O3' A B 36 16.334 18.913 13.588 1.00 40.28 O
ATOM 2 P C B 37 17.521 19.975 13.321 1.00 39.58 P
ATOM 3 OP1 C B 37 18.323 20.063 14.567 1.00 40.52 O
ATOM 4 OP2 C B 37 16.937 21.207 12.741 1.00 40.72 O
ATOM 5 O5' C B 37 18.417 19.315 12.177 1.00 39.13 O
ATOM 6 C5' C B 37 19.188 18.143 12.430 1.00 38.13 C
ATOM 7 C4' C B 37 19.560 17.462 11.128 1.00 37.83 C
ATOM 8 O4' C B 37 18.347 17.060 10.436 1.00 37.65 O
ATOM 9 C3' C B 37 20.325 18.303 10.115 1.00 37.44 C
ATOM 10 O3' C B 37 21.733 18.234 10.352 1.00 36.45 O
ATOM 11 C2' C B 37 19.983 17.594 8.804 1.00 37.13 C
ATOM 12 O2' C B 37 20.766 16.437 8.580 1.00 36.95 O
ATOM 13 C1' C B 37 18.527 17.188 9.037 1.00 37.33 C
ATOM 14 N1 C B 37 17.568 18.183 8.525 1.00 37.51 N
ATOM 15 C2 C B 37 17.080 18.040 7.221 1.00 37.78 C
ATOM 16 O2 C B 37 17.419 17.046 6.560 1.00 37.82 O
ATOM 17 N3 C B 37 16.248 18.983 6.718 1.00 38.02 N
ATOM 18 C4 C B 37 15.887 20.025 7.476 1.00 38.31 C
ATOM 19 N4 C B 37 15.080 20.945 6.937 1.00 37.84 N
ATOM 20 C5 C B 37 16.342 20.172 8.819 1.00 38.23 C
ATOM 21 C6 C B 37 17.173 19.240 9.296 1.00 38.18 C
ATOM 22 P C B 38 22.496 19.436 11.113 1.00 36.49 P
ATOM 23 OP1 C B 38 21.507 20.297 11.811 1.00 38.32 O
ATOM 24 OP2 C B 38 23.457 20.044 10.153 1.00 35.32 O
ATOM 25 O5' C B 38 23.347 18.688 12.231 1.00 36.16 O
TER

Atoms:
C4: (19.846,17.585,4.554)
N3: (19.604,17.423,3.206)
OP1: (23.657,11.880,7.303)
OP2: (23.950,14.436,7.343)
C2: (19.919,16.334,2.433)
C1': (20.897,14.087,2.334)
C3': (23.230,13.795,2.438)
O5': (23.013,13.365,5.341)
O4': (21.167,13.019,3.235)
C5': (23.109,12.241,4.474)
P: (23.167,13.234,6.923)
C4': (22.562,12.602,3.106)
C2': (22.146,14.259,1.474)
O2': (22.046,13.448,0.318)
N1: (20.544,15.291,3.106)
O4: (19.538,18.646,5.101)
O2: (19.664,16.302,1.242)
C6: (20.816,15.389,4.450)
C5: (20.496,16.473,5.179)
O3': (24.426,13.431,1.747)
C2: (17.080,18.040,7.221)
OP1: (18.323,20.063,14.567)
OP2: (16.937,21.207,12.741)
C4: (15.887,20.025,7.476)
O5': (18.417,19.315,12.177)
C3': (20.325,18.303,10.115)
C1': (18.527,17.188,9.037)
O4': (18.347,17.060,10.436)
C5': (19.188,18.143,12.430)
P: (17.521,19.975,13.321)
O2: (17.419,17.046,6.560)
C4': (19.560,17.462,11.128)
C2': (19.983,17.594,8.804)
O2': (20.766,16.437,8.580)
N1: (17.568,18.183,8.525)
N3: (16.248,18.983,6.718)
N4: (15.080,20.945,6.937)
C6: (17.173,19.240,9.296)
C5: (16.342,20.172,8.819)
O3': (21.733,18.234,10.352)
Image (generated by PyMOL):
PyMOL image
show in jmol