Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3LA5:A12:A40
Extra
PDB:
ATOM 1 O3' A A 11 3.304 17.825 3.165 1.00 10.56 O
ATOM 2 P U A 12 2.031 18.629 3.718 1.00 10.75 P
ATOM 3 OP1 U A 12 2.444 19.898 4.386 1.00 12.20 O
ATOM 4 OP2 U A 12 1.205 17.673 4.503 1.00 13.55 O
ATOM 5 O5' U A 12 1.252 18.963 2.365 1.00 10.01 O
ATOM 6 C5' U A 12 1.746 20.010 1.530 1.00 13.39 C
ATOM 7 C4' U A 12 1.367 19.692 0.099 1.00 10.87 C
ATOM 8 O4' U A 12 2.217 18.617 -0.394 1.00 10.97 O
ATOM 9 C3' U A 12 -0.046 19.169 -0.100 1.00 11.91 C
ATOM 10 O3' U A 12 -1.002 20.250 -0.099 1.00 13.13 O
ATOM 11 C2' U A 12 0.115 18.530 -1.470 1.00 12.38 C
ATOM 12 O2' U A 12 0.236 19.513 -2.485 1.00 13.71 O
ATOM 13 C1' U A 12 1.450 17.812 -1.265 1.00 11.14 C
ATOM 14 N1 U A 12 1.268 16.452 -0.663 1.00 9.65 N
ATOM 15 C2 U A 12 0.742 15.467 -1.468 1.00 11.79 C
ATOM 16 O2 U A 12 0.432 15.676 -2.633 1.00 10.83 O
ATOM 17 N3 U A 12 0.589 14.235 -0.871 1.00 10.28 N
ATOM 18 C4 U A 12 0.907 13.918 0.430 1.00 10.46 C
ATOM 19 O4 U A 12 0.700 12.782 0.829 1.00 11.05 O
ATOM 20 C5 U A 12 1.455 14.996 1.219 1.00 10.97 C
ATOM 21 C6 U A 12 1.612 16.201 0.650 1.00 10.28 C
ATOM 22 P C A 13 -2.512 19.988 0.346 1.00 13.95 P
ATOM 23 OP1 C A 13 -3.152 21.327 0.445 1.00 18.33 O
ATOM 24 OP2 C A 13 -2.562 19.061 1.501 1.00 13.17 O
ATOM 25 O5' C A 13 -3.132 19.218 -0.910 1.00 11.69 O
TER
ATOM 1 O3' A B 39 4.674 9.838 8.830 1.00 12.14 O
ATOM 2 P C B 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 3 OP1 C B 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 4 OP2 C B 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 5 O5' C B 40 2.797 11.204 7.898 1.00 11.25 O
ATOM 6 C5' C B 40 3.222 12.537 8.136 1.00 10.79 C
ATOM 7 C4' C B 40 3.017 13.355 6.876 1.00 10.33 C
ATOM 8 O4' C B 40 3.831 12.789 5.813 1.00 10.63 O
ATOM 9 C3' C B 40 1.605 13.396 6.318 1.00 14.22 C
ATOM 10 O3' C B 40 0.893 14.473 6.913 1.00 11.32 O
ATOM 11 C2' C B 40 1.886 13.699 4.844 1.00 13.39 C
ATOM 12 O2' C B 40 2.107 15.075 4.635 1.00 10.88 O
ATOM 13 C1' C B 40 3.190 12.970 4.569 1.00 10.23 C
ATOM 14 N1 C B 40 2.975 11.629 3.971 1.00 10.76 N
ATOM 15 C2 C B 40 3.242 11.457 2.611 1.00 9.71 C
ATOM 16 O2 C B 40 3.656 12.433 1.964 1.00 8.38 O
ATOM 17 N3 C B 40 3.043 10.226 2.068 1.00 9.16 N
ATOM 18 C4 C B 40 2.592 9.220 2.836 1.00 11.64 C
ATOM 19 N4 C B 40 2.400 8.004 2.280 1.00 10.81 N
ATOM 20 C5 C B 40 2.321 9.391 4.230 1.00 12.03 C
ATOM 21 C6 C B 40 2.520 10.604 4.751 1.00 11.87 C
ATOM 22 P C B 41 -0.418 14.255 7.802 1.00 14.43 P
ATOM 23 OP1 C B 41 -0.990 12.918 7.506 1.00 15.55 O
ATOM 24 OP2 C B 41 -1.244 15.477 7.710 1.00 14.56 O
ATOM 25 O5' C B 41 0.166 14.136 9.292 1.00 14.76 O
TER
ATOM 2 P U A 12 2.031 18.629 3.718 1.00 10.75 P
ATOM 3 OP1 U A 12 2.444 19.898 4.386 1.00 12.20 O
ATOM 4 OP2 U A 12 1.205 17.673 4.503 1.00 13.55 O
ATOM 5 O5' U A 12 1.252 18.963 2.365 1.00 10.01 O
ATOM 6 C5' U A 12 1.746 20.010 1.530 1.00 13.39 C
ATOM 7 C4' U A 12 1.367 19.692 0.099 1.00 10.87 C
ATOM 8 O4' U A 12 2.217 18.617 -0.394 1.00 10.97 O
ATOM 9 C3' U A 12 -0.046 19.169 -0.100 1.00 11.91 C
ATOM 10 O3' U A 12 -1.002 20.250 -0.099 1.00 13.13 O
ATOM 11 C2' U A 12 0.115 18.530 -1.470 1.00 12.38 C
ATOM 12 O2' U A 12 0.236 19.513 -2.485 1.00 13.71 O
ATOM 13 C1' U A 12 1.450 17.812 -1.265 1.00 11.14 C
ATOM 14 N1 U A 12 1.268 16.452 -0.663 1.00 9.65 N
ATOM 15 C2 U A 12 0.742 15.467 -1.468 1.00 11.79 C
ATOM 16 O2 U A 12 0.432 15.676 -2.633 1.00 10.83 O
ATOM 17 N3 U A 12 0.589 14.235 -0.871 1.00 10.28 N
ATOM 18 C4 U A 12 0.907 13.918 0.430 1.00 10.46 C
ATOM 19 O4 U A 12 0.700 12.782 0.829 1.00 11.05 O
ATOM 20 C5 U A 12 1.455 14.996 1.219 1.00 10.97 C
ATOM 21 C6 U A 12 1.612 16.201 0.650 1.00 10.28 C
ATOM 22 P C A 13 -2.512 19.988 0.346 1.00 13.95 P
ATOM 23 OP1 C A 13 -3.152 21.327 0.445 1.00 18.33 O
ATOM 24 OP2 C A 13 -2.562 19.061 1.501 1.00 13.17 O
ATOM 25 O5' C A 13 -3.132 19.218 -0.910 1.00 11.69 O
TER
ATOM 1 O3' A B 39 4.674 9.838 8.830 1.00 12.14 O
ATOM 2 P C B 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 3 OP1 C B 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 4 OP2 C B 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 5 O5' C B 40 2.797 11.204 7.898 1.00 11.25 O
ATOM 6 C5' C B 40 3.222 12.537 8.136 1.00 10.79 C
ATOM 7 C4' C B 40 3.017 13.355 6.876 1.00 10.33 C
ATOM 8 O4' C B 40 3.831 12.789 5.813 1.00 10.63 O
ATOM 9 C3' C B 40 1.605 13.396 6.318 1.00 14.22 C
ATOM 10 O3' C B 40 0.893 14.473 6.913 1.00 11.32 O
ATOM 11 C2' C B 40 1.886 13.699 4.844 1.00 13.39 C
ATOM 12 O2' C B 40 2.107 15.075 4.635 1.00 10.88 O
ATOM 13 C1' C B 40 3.190 12.970 4.569 1.00 10.23 C
ATOM 14 N1 C B 40 2.975 11.629 3.971 1.00 10.76 N
ATOM 15 C2 C B 40 3.242 11.457 2.611 1.00 9.71 C
ATOM 16 O2 C B 40 3.656 12.433 1.964 1.00 8.38 O
ATOM 17 N3 C B 40 3.043 10.226 2.068 1.00 9.16 N
ATOM 18 C4 C B 40 2.592 9.220 2.836 1.00 11.64 C
ATOM 19 N4 C B 40 2.400 8.004 2.280 1.00 10.81 N
ATOM 20 C5 C B 40 2.321 9.391 4.230 1.00 12.03 C
ATOM 21 C6 C B 40 2.520 10.604 4.751 1.00 11.87 C
ATOM 22 P C B 41 -0.418 14.255 7.802 1.00 14.43 P
ATOM 23 OP1 C B 41 -0.990 12.918 7.506 1.00 15.55 O
ATOM 24 OP2 C B 41 -1.244 15.477 7.710 1.00 14.56 O
ATOM 25 O5' C B 41 0.166 14.136 9.292 1.00 14.76 O
TER
Atoms:
C4: (0.907,13.918,0.430)
N3: (0.589,14.235,-0.871)
OP1: (2.444,19.898,4.386)
OP2: (1.205,17.673,4.503)
C2: (0.742,15.467,-1.468)
C1': (1.450,17.812,-1.265)
C3': (-0.046,19.169,-0.100)
O5': (1.252,18.963,2.365)
O4': (2.217,18.617,-0.394)
C5': (1.746,20.010,1.530)
P: (2.031,18.629,3.718)
C4': (1.367,19.692,0.099)
C2': (0.115,18.530,-1.470)
O2': (0.236,19.513,-2.485)
N1: (1.268,16.452,-0.663)
O4: (0.700,12.782,0.829)
O2: (0.432,15.676,-2.633)
C6: (1.612,16.201,0.650)
C5: (1.455,14.996,1.219)
O3': (-1.002,20.250,-0.099)
N3: (0.589,14.235,-0.871)
OP1: (2.444,19.898,4.386)
OP2: (1.205,17.673,4.503)
C2: (0.742,15.467,-1.468)
C1': (1.450,17.812,-1.265)
C3': (-0.046,19.169,-0.100)
O5': (1.252,18.963,2.365)
O4': (2.217,18.617,-0.394)
C5': (1.746,20.010,1.530)
P: (2.031,18.629,3.718)
C4': (1.367,19.692,0.099)
C2': (0.115,18.530,-1.470)
O2': (0.236,19.513,-2.485)
N1: (1.268,16.452,-0.663)
O4: (0.700,12.782,0.829)
O2: (0.432,15.676,-2.633)
C6: (1.612,16.201,0.650)
C5: (1.455,14.996,1.219)
O3': (-1.002,20.250,-0.099)
C2: (3.242,11.457,2.611)
OP1: (2.832,10.537,10.336)
OP2: (2.414,8.835,8.448)
C4: (2.592,9.220,2.836)
O5': (2.797,11.204,7.898)
C3': (1.605,13.396,6.318)
C1': (3.190,12.970,4.569)
O4': (3.831,12.789,5.813)
C5': (3.222,12.537,8.136)
P: (3.106,10.052,8.959)
O2: (3.656,12.433,1.964)
C4': (3.017,13.355,6.876)
C2': (1.886,13.699,4.844)
O2': (2.107,15.075,4.635)
N1: (2.975,11.629,3.971)
N3: (3.043,10.226,2.068)
N4: (2.400,8.004,2.280)
C6: (2.520,10.604,4.751)
C5: (2.321,9.391,4.230)
O3': (0.893,14.473,6.913)
OP1: (2.832,10.537,10.336)
OP2: (2.414,8.835,8.448)
C4: (2.592,9.220,2.836)
O5': (2.797,11.204,7.898)
C3': (1.605,13.396,6.318)
C1': (3.190,12.970,4.569)
O4': (3.831,12.789,5.813)
C5': (3.222,12.537,8.136)
P: (3.106,10.052,8.959)
O2: (3.656,12.433,1.964)
C4': (3.017,13.355,6.876)
C2': (1.886,13.699,4.844)
O2': (2.107,15.075,4.635)
N1: (2.975,11.629,3.971)
N3: (3.043,10.226,2.068)
N4: (2.400,8.004,2.280)
C6: (2.520,10.604,4.751)
C5: (2.321,9.391,4.230)
O3': (0.893,14.473,6.913)
Image (generated by PyMOL):