Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2333:A1016
Extra
PDB:
ATOM 1 O3' G A2332 54.783 103.792 113.875 1.00 40.32 O
ATOM 2 P U A2333 55.291 103.762 115.402 1.00 41.29 P
ATOM 3 OP1 U A2333 54.243 103.010 116.132 1.00 38.66 O
ATOM 4 OP2 U A2333 55.648 105.129 115.836 1.00 40.16 O
ATOM 5 O5' U A2333 56.647 102.923 115.360 1.00 39.08 O
ATOM 6 C5' U A2333 56.645 101.561 114.906 1.00 39.73 C
ATOM 7 C4' U A2333 58.044 101.078 114.638 1.00 40.51 C
ATOM 8 O4' U A2333 58.703 101.886 113.642 1.00 41.58 O
ATOM 9 C3' U A2333 58.985 101.109 115.815 1.00 40.33 C
ATOM 10 O3' U A2333 58.694 99.976 116.612 1.00 41.77 O
ATOM 11 C2' U A2333 60.341 101.016 115.127 1.00 40.86 C
ATOM 12 O2' U A2333 60.633 99.705 114.667 1.00 40.07 O
ATOM 13 C1' U A2333 60.097 101.890 113.894 1.00 41.23 C
ATOM 14 N1 U A2333 60.531 103.288 114.011 1.00 42.44 N
ATOM 15 C2 U A2333 61.874 103.574 113.811 1.00 42.73 C
ATOM 16 O2 U A2333 62.727 102.706 113.641 1.00 43.60 O
ATOM 17 N3 U A2333 62.179 104.909 113.831 1.00 42.46 N
ATOM 18 C4 U A2333 61.303 105.952 114.055 1.00 43.31 C
ATOM 19 O4 U A2333 61.710 107.110 113.971 1.00 45.51 O
ATOM 20 C5 U A2333 59.955 105.560 114.309 1.00 42.39 C
ATOM 21 C6 U A2333 59.625 104.279 114.277 1.00 42.20 C
ATOM 22 P C A2334 58.590 100.132 118.198 1.00 42.90 P
ATOM 23 OP1 C A2334 58.172 98.816 118.718 1.00 39.63 O
ATOM 24 OP2 C A2334 57.798 101.352 118.534 1.00 41.92 O
ATOM 25 O5' C A2334 60.103 100.368 118.604 1.00 42.86 O
TER
ATOM 1 O3' U B1015 62.662 91.914 116.077 1.00 37.91 O
ATOM 2 P A B1016 61.742 91.659 114.801 1.00 36.95 P
ATOM 3 OP1 A B1016 60.850 90.577 115.240 1.00 39.08 O
ATOM 4 OP2 A B1016 62.591 91.483 113.607 1.00 37.35 O
ATOM 5 O5' A B1016 60.888 92.989 114.632 1.00 36.34 O
ATOM 6 C5' A B1016 59.998 93.418 115.660 1.00 34.72 C
ATOM 7 C4' A B1016 59.784 94.888 115.547 1.00 34.58 C
ATOM 8 O4' A B1016 61.081 95.517 115.473 1.00 34.86 O
ATOM 9 C3' A B1016 59.077 95.336 114.284 1.00 34.24 C
ATOM 10 O3' A B1016 57.689 95.273 114.561 1.00 37.91 O
ATOM 11 C2' A B1016 59.556 96.768 114.181 1.00 33.16 C
ATOM 12 O2' A B1016 58.914 97.481 115.211 1.00 31.93 O
ATOM 13 C1' A B1016 61.024 96.612 114.586 1.00 32.73 C
ATOM 14 N9 A B1016 61.948 96.347 113.486 1.00 30.58 N
ATOM 15 C8 A B1016 62.298 95.162 112.894 1.00 29.98 C
ATOM 16 N7 A B1016 63.188 95.292 111.944 1.00 29.79 N
ATOM 17 C5 A B1016 63.429 96.657 111.904 1.00 29.40 C
ATOM 18 C6 A B1016 64.274 97.450 111.109 1.00 28.23 C
ATOM 19 N6 A B1016 65.084 96.963 110.165 1.00 29.36 N
ATOM 20 N1 A B1016 64.262 98.772 111.319 1.00 25.66 N
ATOM 21 C2 A B1016 63.469 99.253 112.274 1.00 28.26 C
ATOM 22 N3 A B1016 62.642 98.616 113.090 1.00 28.84 N
ATOM 23 C4 A B1016 62.668 97.309 112.845 1.00 29.09 C
ATOM 24 P A B1017 56.610 95.182 113.373 1.00 40.95 P
ATOM 25 OP1 A B1017 55.302 95.122 114.073 1.00 39.95 O
ATOM 26 OP2 A B1017 57.003 94.099 112.430 1.00 39.40 O
ATOM 27 O5' A B1017 56.712 96.576 112.612 1.00 39.34 O
TER
ATOM 2 P U A2333 55.291 103.762 115.402 1.00 41.29 P
ATOM 3 OP1 U A2333 54.243 103.010 116.132 1.00 38.66 O
ATOM 4 OP2 U A2333 55.648 105.129 115.836 1.00 40.16 O
ATOM 5 O5' U A2333 56.647 102.923 115.360 1.00 39.08 O
ATOM 6 C5' U A2333 56.645 101.561 114.906 1.00 39.73 C
ATOM 7 C4' U A2333 58.044 101.078 114.638 1.00 40.51 C
ATOM 8 O4' U A2333 58.703 101.886 113.642 1.00 41.58 O
ATOM 9 C3' U A2333 58.985 101.109 115.815 1.00 40.33 C
ATOM 10 O3' U A2333 58.694 99.976 116.612 1.00 41.77 O
ATOM 11 C2' U A2333 60.341 101.016 115.127 1.00 40.86 C
ATOM 12 O2' U A2333 60.633 99.705 114.667 1.00 40.07 O
ATOM 13 C1' U A2333 60.097 101.890 113.894 1.00 41.23 C
ATOM 14 N1 U A2333 60.531 103.288 114.011 1.00 42.44 N
ATOM 15 C2 U A2333 61.874 103.574 113.811 1.00 42.73 C
ATOM 16 O2 U A2333 62.727 102.706 113.641 1.00 43.60 O
ATOM 17 N3 U A2333 62.179 104.909 113.831 1.00 42.46 N
ATOM 18 C4 U A2333 61.303 105.952 114.055 1.00 43.31 C
ATOM 19 O4 U A2333 61.710 107.110 113.971 1.00 45.51 O
ATOM 20 C5 U A2333 59.955 105.560 114.309 1.00 42.39 C
ATOM 21 C6 U A2333 59.625 104.279 114.277 1.00 42.20 C
ATOM 22 P C A2334 58.590 100.132 118.198 1.00 42.90 P
ATOM 23 OP1 C A2334 58.172 98.816 118.718 1.00 39.63 O
ATOM 24 OP2 C A2334 57.798 101.352 118.534 1.00 41.92 O
ATOM 25 O5' C A2334 60.103 100.368 118.604 1.00 42.86 O
TER
ATOM 1 O3' U B1015 62.662 91.914 116.077 1.00 37.91 O
ATOM 2 P A B1016 61.742 91.659 114.801 1.00 36.95 P
ATOM 3 OP1 A B1016 60.850 90.577 115.240 1.00 39.08 O
ATOM 4 OP2 A B1016 62.591 91.483 113.607 1.00 37.35 O
ATOM 5 O5' A B1016 60.888 92.989 114.632 1.00 36.34 O
ATOM 6 C5' A B1016 59.998 93.418 115.660 1.00 34.72 C
ATOM 7 C4' A B1016 59.784 94.888 115.547 1.00 34.58 C
ATOM 8 O4' A B1016 61.081 95.517 115.473 1.00 34.86 O
ATOM 9 C3' A B1016 59.077 95.336 114.284 1.00 34.24 C
ATOM 10 O3' A B1016 57.689 95.273 114.561 1.00 37.91 O
ATOM 11 C2' A B1016 59.556 96.768 114.181 1.00 33.16 C
ATOM 12 O2' A B1016 58.914 97.481 115.211 1.00 31.93 O
ATOM 13 C1' A B1016 61.024 96.612 114.586 1.00 32.73 C
ATOM 14 N9 A B1016 61.948 96.347 113.486 1.00 30.58 N
ATOM 15 C8 A B1016 62.298 95.162 112.894 1.00 29.98 C
ATOM 16 N7 A B1016 63.188 95.292 111.944 1.00 29.79 N
ATOM 17 C5 A B1016 63.429 96.657 111.904 1.00 29.40 C
ATOM 18 C6 A B1016 64.274 97.450 111.109 1.00 28.23 C
ATOM 19 N6 A B1016 65.084 96.963 110.165 1.00 29.36 N
ATOM 20 N1 A B1016 64.262 98.772 111.319 1.00 25.66 N
ATOM 21 C2 A B1016 63.469 99.253 112.274 1.00 28.26 C
ATOM 22 N3 A B1016 62.642 98.616 113.090 1.00 28.84 N
ATOM 23 C4 A B1016 62.668 97.309 112.845 1.00 29.09 C
ATOM 24 P A B1017 56.610 95.182 113.373 1.00 40.95 P
ATOM 25 OP1 A B1017 55.302 95.122 114.073 1.00 39.95 O
ATOM 26 OP2 A B1017 57.003 94.099 112.430 1.00 39.40 O
ATOM 27 O5' A B1017 56.712 96.576 112.612 1.00 39.34 O
TER
Atoms:
C4: (61.303,105.952,114.055)
N3: (62.179,104.909,113.831)
OP1: (54.243,103.010,116.132)
OP2: (55.648,105.129,115.836)
C2: (61.874,103.574,113.811)
C1': (60.097,101.890,113.894)
C3': (58.985,101.109,115.815)
O5': (56.647,102.923,115.360)
O4': (58.703,101.886,113.642)
C5': (56.645,101.561,114.906)
P: (55.291,103.762,115.402)
C4': (58.044,101.078,114.638)
C2': (60.341,101.016,115.127)
O2': (60.633,99.705,114.667)
N1: (60.531,103.288,114.011)
O4: (61.710,107.110,113.971)
O2: (62.727,102.706,113.641)
C6: (59.625,104.279,114.277)
C5: (59.955,105.560,114.309)
O3': (58.694,99.976,116.612)
N3: (62.179,104.909,113.831)
OP1: (54.243,103.010,116.132)
OP2: (55.648,105.129,115.836)
C2: (61.874,103.574,113.811)
C1': (60.097,101.890,113.894)
C3': (58.985,101.109,115.815)
O5': (56.647,102.923,115.360)
O4': (58.703,101.886,113.642)
C5': (56.645,101.561,114.906)
P: (55.291,103.762,115.402)
C4': (58.044,101.078,114.638)
C2': (60.341,101.016,115.127)
O2': (60.633,99.705,114.667)
N1: (60.531,103.288,114.011)
O4: (61.710,107.110,113.971)
O2: (62.727,102.706,113.641)
C6: (59.625,104.279,114.277)
C5: (59.955,105.560,114.309)
O3': (58.694,99.976,116.612)
OP1: (60.850,90.577,115.240)
OP2: (62.591,91.483,113.607)
C3': (59.077,95.336,114.284)
C1': (61.024,96.612,114.586)
C5': (59.998,93.418,115.660)
O4': (61.081,95.517,115.473)
C8: (62.298,95.162,112.894)
O2': (58.914,97.481,115.211)
C6: (64.274,97.450,111.109)
C5: (63.429,96.657,111.904)
C4: (62.668,97.309,112.845)
P: (61.742,91.659,114.801)
C4': (59.784,94.888,115.547)
C2': (59.556,96.768,114.181)
C2: (63.469,99.253,112.274)
N1: (64.262,98.772,111.319)
N3: (62.642,98.616,113.090)
N6: (65.084,96.963,110.165)
N7: (63.188,95.292,111.944)
N9: (61.948,96.347,113.486)
O5': (60.888,92.989,114.632)
O3': (57.689,95.273,114.561)
OP2: (62.591,91.483,113.607)
C3': (59.077,95.336,114.284)
C1': (61.024,96.612,114.586)
C5': (59.998,93.418,115.660)
O4': (61.081,95.517,115.473)
C8: (62.298,95.162,112.894)
O2': (58.914,97.481,115.211)
C6: (64.274,97.450,111.109)
C5: (63.429,96.657,111.904)
C4: (62.668,97.309,112.845)
P: (61.742,91.659,114.801)
C4': (59.784,94.888,115.547)
C2': (59.556,96.768,114.181)
C2: (63.469,99.253,112.274)
N1: (64.262,98.772,111.319)
N3: (62.642,98.616,113.090)
N6: (65.084,96.963,110.165)
N7: (63.188,95.292,111.944)
N9: (61.948,96.347,113.486)
O5': (60.888,92.989,114.632)
O3': (57.689,95.273,114.561)
Image (generated by PyMOL):