Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A223:A419
Extra
PDB:
ATOM 1 O3' A A 222 -78.918 -46.422 83.704 1.00 0.01 O
ATOM 2 P U A 223 -79.770 -46.902 82.440 1.00 0.23 P
ATOM 3 OP1 U A 223 -79.285 -46.130 81.272 1.00 0.23 O
ATOM 4 OP2 U A 223 -81.200 -46.811 82.811 1.00 0.23 O
ATOM 5 O5' U A 223 -79.345 -48.413 82.308 1.00 0.23 O
ATOM 6 C5' U A 223 -78.398 -48.817 81.356 1.00 0.23 C
ATOM 7 C4' U A 223 -78.601 -50.256 81.033 1.00 0.23 C
ATOM 8 O4' U A 223 -78.183 -51.066 82.169 1.00 0.23 O
ATOM 9 C3' U A 223 -80.042 -50.641 80.826 1.00 0.23 C
ATOM 10 O3' U A 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 11 C2' U A 223 -80.082 -52.109 81.210 1.00 0.23 C
ATOM 12 O2' U A 223 -79.602 -52.929 80.154 1.00 0.23 O
ATOM 13 C1' U A 223 -79.084 -52.136 82.365 1.00 0.23 C
ATOM 14 N1 U A 223 -79.756 -51.953 83.672 1.00 0.26 N
ATOM 15 C2 U A 223 -80.247 -53.074 84.311 1.00 0.26 C
ATOM 16 O2 U A 223 -80.159 -54.200 83.869 1.00 0.26 O
ATOM 17 N3 U A 223 -80.881 -52.858 85.498 1.00 0.26 N
ATOM 18 C4 U A 223 -81.082 -51.656 86.119 1.00 0.26 C
ATOM 19 O4 U A 223 -81.683 -51.649 87.191 1.00 0.26 O
ATOM 20 C5 U A 223 -80.558 -50.531 85.407 1.00 0.26 C
ATOM 21 C6 U A 223 -79.935 -50.715 84.229 1.00 0.26 C
ATOM 22 P C A 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 23 OP1 C A 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 24 OP2 C A 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 25 O5' C A 224 -82.510 -51.779 79.152 1.00 0.01 O
TER
ATOM 1 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 2 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 3 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 4 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 5 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
ATOM 6 C5' C B 419 -80.158 -50.011 89.896 1.00 0.01 C
ATOM 7 C4' C B 419 -79.958 -49.006 88.821 1.00 0.01 C
ATOM 8 O4' C B 419 -81.205 -48.343 88.532 1.00 0.01 O
ATOM 9 C3' C B 419 -79.017 -47.886 89.165 1.00 0.01 C
ATOM 10 O3' C B 419 -77.680 -48.267 89.022 1.00 0.01 O
ATOM 11 C2' C B 419 -79.439 -46.802 88.211 1.00 0.01 C
ATOM 12 O2' C B 419 -78.919 -47.056 86.920 1.00 0.01 O
ATOM 13 C1' C B 419 -80.953 -47.006 88.180 1.00 0.01 C
ATOM 14 N1 C B 419 -81.645 -46.128 89.143 1.00 0.01 N
ATOM 15 C2 C B 419 -81.879 -44.796 88.797 1.00 0.01 C
ATOM 16 O2 C B 419 -81.501 -44.406 87.708 1.00 0.01 O
ATOM 17 N3 C B 419 -82.508 -43.950 89.624 1.00 0.01 N
ATOM 18 C4 C B 419 -82.921 -44.393 90.796 1.00 0.01 C
ATOM 19 N4 C B 419 -83.537 -43.534 91.601 1.00 0.01 N
ATOM 20 C5 C B 419 -82.716 -45.748 91.190 1.00 0.01 C
ATOM 21 C6 C B 419 -82.081 -46.583 90.345 1.00 0.01 C
ATOM 22 P C B 420 -76.608 -47.866 90.134 1.00 7.31 P
ATOM 23 OP1 C B 420 -75.444 -48.765 89.958 1.00 7.31 O
ATOM 24 OP2 C B 420 -77.296 -47.845 91.446 1.00 7.31 O
ATOM 25 O5' C B 420 -76.231 -46.407 89.694 1.00 7.31 O
TER
ATOM 2 P U A 223 -79.770 -46.902 82.440 1.00 0.23 P
ATOM 3 OP1 U A 223 -79.285 -46.130 81.272 1.00 0.23 O
ATOM 4 OP2 U A 223 -81.200 -46.811 82.811 1.00 0.23 O
ATOM 5 O5' U A 223 -79.345 -48.413 82.308 1.00 0.23 O
ATOM 6 C5' U A 223 -78.398 -48.817 81.356 1.00 0.23 C
ATOM 7 C4' U A 223 -78.601 -50.256 81.033 1.00 0.23 C
ATOM 8 O4' U A 223 -78.183 -51.066 82.169 1.00 0.23 O
ATOM 9 C3' U A 223 -80.042 -50.641 80.826 1.00 0.23 C
ATOM 10 O3' U A 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 11 C2' U A 223 -80.082 -52.109 81.210 1.00 0.23 C
ATOM 12 O2' U A 223 -79.602 -52.929 80.154 1.00 0.23 O
ATOM 13 C1' U A 223 -79.084 -52.136 82.365 1.00 0.23 C
ATOM 14 N1 U A 223 -79.756 -51.953 83.672 1.00 0.26 N
ATOM 15 C2 U A 223 -80.247 -53.074 84.311 1.00 0.26 C
ATOM 16 O2 U A 223 -80.159 -54.200 83.869 1.00 0.26 O
ATOM 17 N3 U A 223 -80.881 -52.858 85.498 1.00 0.26 N
ATOM 18 C4 U A 223 -81.082 -51.656 86.119 1.00 0.26 C
ATOM 19 O4 U A 223 -81.683 -51.649 87.191 1.00 0.26 O
ATOM 20 C5 U A 223 -80.558 -50.531 85.407 1.00 0.26 C
ATOM 21 C6 U A 223 -79.935 -50.715 84.229 1.00 0.26 C
ATOM 22 P C A 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 23 OP1 C A 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 24 OP2 C A 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 25 O5' C A 224 -82.510 -51.779 79.152 1.00 0.01 O
TER
ATOM 1 O3' U B 418 -83.371 -51.291 90.352 1.00 0.01 O
ATOM 2 P C B 419 -82.090 -51.034 91.269 1.00 0.01 P
ATOM 3 OP1 C B 419 -81.251 -52.222 91.136 1.00 0.01 O
ATOM 4 OP2 C B 419 -82.571 -50.649 92.618 1.00 0.01 O
ATOM 5 O5' C B 419 -81.376 -49.808 90.567 1.00 0.01 O
ATOM 6 C5' C B 419 -80.158 -50.011 89.896 1.00 0.01 C
ATOM 7 C4' C B 419 -79.958 -49.006 88.821 1.00 0.01 C
ATOM 8 O4' C B 419 -81.205 -48.343 88.532 1.00 0.01 O
ATOM 9 C3' C B 419 -79.017 -47.886 89.165 1.00 0.01 C
ATOM 10 O3' C B 419 -77.680 -48.267 89.022 1.00 0.01 O
ATOM 11 C2' C B 419 -79.439 -46.802 88.211 1.00 0.01 C
ATOM 12 O2' C B 419 -78.919 -47.056 86.920 1.00 0.01 O
ATOM 13 C1' C B 419 -80.953 -47.006 88.180 1.00 0.01 C
ATOM 14 N1 C B 419 -81.645 -46.128 89.143 1.00 0.01 N
ATOM 15 C2 C B 419 -81.879 -44.796 88.797 1.00 0.01 C
ATOM 16 O2 C B 419 -81.501 -44.406 87.708 1.00 0.01 O
ATOM 17 N3 C B 419 -82.508 -43.950 89.624 1.00 0.01 N
ATOM 18 C4 C B 419 -82.921 -44.393 90.796 1.00 0.01 C
ATOM 19 N4 C B 419 -83.537 -43.534 91.601 1.00 0.01 N
ATOM 20 C5 C B 419 -82.716 -45.748 91.190 1.00 0.01 C
ATOM 21 C6 C B 419 -82.081 -46.583 90.345 1.00 0.01 C
ATOM 22 P C B 420 -76.608 -47.866 90.134 1.00 7.31 P
ATOM 23 OP1 C B 420 -75.444 -48.765 89.958 1.00 7.31 O
ATOM 24 OP2 C B 420 -77.296 -47.845 91.446 1.00 7.31 O
ATOM 25 O5' C B 420 -76.231 -46.407 89.694 1.00 7.31 O
TER
Atoms:
C4: (-81.082,-51.656,86.119)
N3: (-80.881,-52.858,85.498)
OP1: (-79.285,-46.130,81.272)
OP2: (-81.200,-46.811,82.811)
C2: (-80.247,-53.074,84.311)
C1': (-79.084,-52.136,82.365)
C3': (-80.042,-50.641,80.826)
O5': (-79.345,-48.413,82.308)
O4': (-78.183,-51.066,82.169)
C5': (-78.398,-48.817,81.356)
P: (-79.770,-46.902,82.440)
C4': (-78.601,-50.256,81.033)
C2': (-80.082,-52.109,81.210)
O2': (-79.602,-52.929,80.154)
N1: (-79.756,-51.953,83.672)
O4: (-81.683,-51.649,87.191)
O2: (-80.159,-54.200,83.869)
C6: (-79.935,-50.715,84.229)
C5: (-80.558,-50.531,85.407)
O3': (-80.513,-50.375,79.533)
N3: (-80.881,-52.858,85.498)
OP1: (-79.285,-46.130,81.272)
OP2: (-81.200,-46.811,82.811)
C2: (-80.247,-53.074,84.311)
C1': (-79.084,-52.136,82.365)
C3': (-80.042,-50.641,80.826)
O5': (-79.345,-48.413,82.308)
O4': (-78.183,-51.066,82.169)
C5': (-78.398,-48.817,81.356)
P: (-79.770,-46.902,82.440)
C4': (-78.601,-50.256,81.033)
C2': (-80.082,-52.109,81.210)
O2': (-79.602,-52.929,80.154)
N1: (-79.756,-51.953,83.672)
O4: (-81.683,-51.649,87.191)
O2: (-80.159,-54.200,83.869)
C6: (-79.935,-50.715,84.229)
C5: (-80.558,-50.531,85.407)
O3': (-80.513,-50.375,79.533)
C2: (-81.879,-44.796,88.797)
OP1: (-81.251,-52.222,91.136)
OP2: (-82.571,-50.649,92.618)
C4: (-82.921,-44.393,90.796)
O5': (-81.376,-49.808,90.567)
C3': (-79.017,-47.886,89.165)
C1': (-80.953,-47.006,88.180)
O4': (-81.205,-48.343,88.532)
C5': (-80.158,-50.011,89.896)
P: (-82.090,-51.034,91.269)
O2: (-81.501,-44.406,87.708)
C4': (-79.958,-49.006,88.821)
C2': (-79.439,-46.802,88.211)
O2': (-78.919,-47.056,86.920)
N1: (-81.645,-46.128,89.143)
N3: (-82.508,-43.950,89.624)
N4: (-83.537,-43.534,91.601)
C6: (-82.081,-46.583,90.345)
C5: (-82.716,-45.748,91.190)
O3': (-77.680,-48.267,89.022)
OP1: (-81.251,-52.222,91.136)
OP2: (-82.571,-50.649,92.618)
C4: (-82.921,-44.393,90.796)
O5': (-81.376,-49.808,90.567)
C3': (-79.017,-47.886,89.165)
C1': (-80.953,-47.006,88.180)
O4': (-81.205,-48.343,88.532)
C5': (-80.158,-50.011,89.896)
P: (-82.090,-51.034,91.269)
O2: (-81.501,-44.406,87.708)
C4': (-79.958,-49.006,88.821)
C2': (-79.439,-46.802,88.211)
O2': (-78.919,-47.056,86.920)
N1: (-81.645,-46.128,89.143)
N3: (-82.508,-43.950,89.624)
N4: (-83.537,-43.534,91.601)
C6: (-82.081,-46.583,90.345)
C5: (-82.716,-45.748,91.190)
O3': (-77.680,-48.267,89.022)
Image (generated by PyMOL):