Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A541:A507
Extra
PDB:
ATOM 1 O3' G A 540 -56.699 50.902 70.011 1.00 4.78 O
ATOM 2 P U A 541 -55.521 49.848 70.323 1.00 10.60 P
ATOM 3 OP1 U A 541 -55.071 49.299 69.011 1.00 10.60 O
ATOM 4 OP2 U A 541 -56.056 48.918 71.361 1.00 10.60 O
ATOM 5 O5' U A 541 -54.367 50.746 70.950 1.00 10.60 O
ATOM 6 C5' U A 541 -53.720 51.715 70.161 1.00 10.60 C
ATOM 7 C4' U A 541 -52.820 52.570 70.987 1.00 10.60 C
ATOM 8 O4' U A 541 -53.586 53.231 72.037 1.00 10.60 O
ATOM 9 C3' U A 541 -51.752 51.830 71.754 1.00 10.60 C
ATOM 10 O3' U A 541 -50.665 51.422 70.963 1.00 10.60 O
ATOM 11 C2' U A 541 -51.390 52.826 72.837 1.00 10.60 C
ATOM 12 O2' U A 541 -50.611 53.894 72.310 1.00 10.60 O
ATOM 13 C1' U A 541 -52.775 53.359 73.194 1.00 10.60 C
ATOM 14 N1 U A 541 -53.379 52.584 74.283 1.00 10.61 N
ATOM 15 C2 U A 541 -52.761 52.645 75.507 1.00 10.61 C
ATOM 16 O2 U A 541 -51.775 53.285 75.758 1.00 10.61 O
ATOM 17 N3 U A 541 -53.341 51.927 76.479 1.00 10.61 N
ATOM 18 C4 U A 541 -54.455 51.155 76.354 1.00 10.61 C
ATOM 19 O4 U A 541 -54.849 50.567 77.351 1.00 10.61 O
ATOM 20 C5 U A 541 -55.050 51.134 75.059 1.00 10.61 C
ATOM 21 C6 U A 541 -54.492 51.839 74.077 1.00 10.61 C
ATOM 22 P G A 542 -49.853 50.118 71.404 1.00 7.81 P
ATOM 23 OP1 G A 542 -48.803 49.865 70.382 1.00 7.81 O
ATOM 24 OP2 G A 542 -50.875 49.041 71.695 1.00 7.81 O
ATOM 25 O5' G A 542 -49.190 50.595 72.746 1.00 7.81 O
TER
ATOM 1 O3' U B 506 -47.915 61.597 70.543 1.00 28.17 O
ATOM 2 P A B 507 -47.956 61.001 69.059 1.00 5.59 P
ATOM 3 OP1 A B 507 -46.747 61.505 68.352 1.00 5.59 O
ATOM 4 OP2 A B 507 -49.275 61.321 68.491 1.00 5.59 O
ATOM 5 O5' A B 507 -47.826 59.430 69.322 1.00 5.59 O
ATOM 6 C5' A B 507 -47.998 58.482 68.272 1.00 5.59 C
ATOM 7 C4' A B 507 -48.607 57.217 68.791 1.00 5.59 C
ATOM 8 O4' A B 507 -47.857 56.774 69.944 1.00 5.59 O
ATOM 9 C3' A B 507 -50.033 57.356 69.270 1.00 5.59 C
ATOM 10 O3' A B 507 -50.949 57.087 68.252 1.00 5.59 O
ATOM 11 C2' A B 507 -50.149 56.393 70.437 1.00 5.59 C
ATOM 12 O2' A B 507 -50.583 55.127 69.996 1.00 5.59 O
ATOM 13 C1' A B 507 -48.714 56.280 70.941 1.00 5.59 C
ATOM 14 N9 A B 507 -48.502 57.058 72.173 1.00 5.56 N
ATOM 15 C8 A B 507 -47.989 58.332 72.261 1.00 5.56 C
ATOM 16 N7 A B 507 -47.934 58.802 73.492 1.00 5.56 N
ATOM 17 C5 A B 507 -48.445 57.761 74.259 1.00 5.56 C
ATOM 18 C6 A B 507 -48.647 57.650 75.644 1.00 5.56 C
ATOM 19 N6 A B 507 -48.312 58.659 76.457 1.00 5.56 N
ATOM 20 N1 A B 507 -49.174 56.494 76.143 1.00 5.56 N
ATOM 21 C2 A B 507 -49.482 55.534 75.256 1.00 5.56 C
ATOM 22 N3 A B 507 -49.350 55.529 73.917 1.00 5.56 N
ATOM 23 C4 A B 507 -48.807 56.679 73.466 1.00 5.56 C
ATOM 24 P A B 508 -51.855 58.255 67.684 1.00 11.16 P
ATOM 25 OP1 A B 508 -52.024 58.016 66.237 1.00 11.16 O
ATOM 26 OP2 A B 508 -51.241 59.519 68.124 1.00 11.16 O
ATOM 27 O5' A B 508 -53.243 58.030 68.439 1.00 11.16 O
TER
ATOM 2 P U A 541 -55.521 49.848 70.323 1.00 10.60 P
ATOM 3 OP1 U A 541 -55.071 49.299 69.011 1.00 10.60 O
ATOM 4 OP2 U A 541 -56.056 48.918 71.361 1.00 10.60 O
ATOM 5 O5' U A 541 -54.367 50.746 70.950 1.00 10.60 O
ATOM 6 C5' U A 541 -53.720 51.715 70.161 1.00 10.60 C
ATOM 7 C4' U A 541 -52.820 52.570 70.987 1.00 10.60 C
ATOM 8 O4' U A 541 -53.586 53.231 72.037 1.00 10.60 O
ATOM 9 C3' U A 541 -51.752 51.830 71.754 1.00 10.60 C
ATOM 10 O3' U A 541 -50.665 51.422 70.963 1.00 10.60 O
ATOM 11 C2' U A 541 -51.390 52.826 72.837 1.00 10.60 C
ATOM 12 O2' U A 541 -50.611 53.894 72.310 1.00 10.60 O
ATOM 13 C1' U A 541 -52.775 53.359 73.194 1.00 10.60 C
ATOM 14 N1 U A 541 -53.379 52.584 74.283 1.00 10.61 N
ATOM 15 C2 U A 541 -52.761 52.645 75.507 1.00 10.61 C
ATOM 16 O2 U A 541 -51.775 53.285 75.758 1.00 10.61 O
ATOM 17 N3 U A 541 -53.341 51.927 76.479 1.00 10.61 N
ATOM 18 C4 U A 541 -54.455 51.155 76.354 1.00 10.61 C
ATOM 19 O4 U A 541 -54.849 50.567 77.351 1.00 10.61 O
ATOM 20 C5 U A 541 -55.050 51.134 75.059 1.00 10.61 C
ATOM 21 C6 U A 541 -54.492 51.839 74.077 1.00 10.61 C
ATOM 22 P G A 542 -49.853 50.118 71.404 1.00 7.81 P
ATOM 23 OP1 G A 542 -48.803 49.865 70.382 1.00 7.81 O
ATOM 24 OP2 G A 542 -50.875 49.041 71.695 1.00 7.81 O
ATOM 25 O5' G A 542 -49.190 50.595 72.746 1.00 7.81 O
TER
ATOM 1 O3' U B 506 -47.915 61.597 70.543 1.00 28.17 O
ATOM 2 P A B 507 -47.956 61.001 69.059 1.00 5.59 P
ATOM 3 OP1 A B 507 -46.747 61.505 68.352 1.00 5.59 O
ATOM 4 OP2 A B 507 -49.275 61.321 68.491 1.00 5.59 O
ATOM 5 O5' A B 507 -47.826 59.430 69.322 1.00 5.59 O
ATOM 6 C5' A B 507 -47.998 58.482 68.272 1.00 5.59 C
ATOM 7 C4' A B 507 -48.607 57.217 68.791 1.00 5.59 C
ATOM 8 O4' A B 507 -47.857 56.774 69.944 1.00 5.59 O
ATOM 9 C3' A B 507 -50.033 57.356 69.270 1.00 5.59 C
ATOM 10 O3' A B 507 -50.949 57.087 68.252 1.00 5.59 O
ATOM 11 C2' A B 507 -50.149 56.393 70.437 1.00 5.59 C
ATOM 12 O2' A B 507 -50.583 55.127 69.996 1.00 5.59 O
ATOM 13 C1' A B 507 -48.714 56.280 70.941 1.00 5.59 C
ATOM 14 N9 A B 507 -48.502 57.058 72.173 1.00 5.56 N
ATOM 15 C8 A B 507 -47.989 58.332 72.261 1.00 5.56 C
ATOM 16 N7 A B 507 -47.934 58.802 73.492 1.00 5.56 N
ATOM 17 C5 A B 507 -48.445 57.761 74.259 1.00 5.56 C
ATOM 18 C6 A B 507 -48.647 57.650 75.644 1.00 5.56 C
ATOM 19 N6 A B 507 -48.312 58.659 76.457 1.00 5.56 N
ATOM 20 N1 A B 507 -49.174 56.494 76.143 1.00 5.56 N
ATOM 21 C2 A B 507 -49.482 55.534 75.256 1.00 5.56 C
ATOM 22 N3 A B 507 -49.350 55.529 73.917 1.00 5.56 N
ATOM 23 C4 A B 507 -48.807 56.679 73.466 1.00 5.56 C
ATOM 24 P A B 508 -51.855 58.255 67.684 1.00 11.16 P
ATOM 25 OP1 A B 508 -52.024 58.016 66.237 1.00 11.16 O
ATOM 26 OP2 A B 508 -51.241 59.519 68.124 1.00 11.16 O
ATOM 27 O5' A B 508 -53.243 58.030 68.439 1.00 11.16 O
TER
Atoms:
C4: (-54.455,51.155,76.354)
N3: (-53.341,51.927,76.479)
OP1: (-55.071,49.299,69.011)
OP2: (-56.056,48.918,71.361)
C2: (-52.761,52.645,75.507)
C1': (-52.775,53.359,73.194)
C3': (-51.752,51.830,71.754)
O5': (-54.367,50.746,70.950)
O4': (-53.586,53.231,72.037)
C5': (-53.720,51.715,70.161)
P: (-55.521,49.848,70.323)
C4': (-52.820,52.570,70.987)
C2': (-51.390,52.826,72.837)
O2': (-50.611,53.894,72.310)
N1: (-53.379,52.584,74.283)
O4: (-54.849,50.567,77.351)
O2: (-51.775,53.285,75.758)
C6: (-54.492,51.839,74.077)
C5: (-55.050,51.134,75.059)
O3': (-50.665,51.422,70.963)
N3: (-53.341,51.927,76.479)
OP1: (-55.071,49.299,69.011)
OP2: (-56.056,48.918,71.361)
C2: (-52.761,52.645,75.507)
C1': (-52.775,53.359,73.194)
C3': (-51.752,51.830,71.754)
O5': (-54.367,50.746,70.950)
O4': (-53.586,53.231,72.037)
C5': (-53.720,51.715,70.161)
P: (-55.521,49.848,70.323)
C4': (-52.820,52.570,70.987)
C2': (-51.390,52.826,72.837)
O2': (-50.611,53.894,72.310)
N1: (-53.379,52.584,74.283)
O4: (-54.849,50.567,77.351)
O2: (-51.775,53.285,75.758)
C6: (-54.492,51.839,74.077)
C5: (-55.050,51.134,75.059)
O3': (-50.665,51.422,70.963)
OP1: (-46.747,61.505,68.352)
OP2: (-49.275,61.321,68.491)
C3': (-50.033,57.356,69.270)
C1': (-48.714,56.280,70.941)
C5': (-47.998,58.482,68.272)
O4': (-47.857,56.774,69.944)
C8: (-47.989,58.332,72.261)
O2': (-50.583,55.127,69.996)
C6: (-48.647,57.650,75.644)
C5: (-48.445,57.761,74.259)
C4: (-48.807,56.679,73.466)
P: (-47.956,61.001,69.059)
C4': (-48.607,57.217,68.791)
C2': (-50.149,56.393,70.437)
C2: (-49.482,55.534,75.256)
N1: (-49.174,56.494,76.143)
N3: (-49.350,55.529,73.917)
N6: (-48.312,58.659,76.457)
N7: (-47.934,58.802,73.492)
N9: (-48.502,57.058,72.173)
O5': (-47.826,59.430,69.322)
O3': (-50.949,57.087,68.252)
OP2: (-49.275,61.321,68.491)
C3': (-50.033,57.356,69.270)
C1': (-48.714,56.280,70.941)
C5': (-47.998,58.482,68.272)
O4': (-47.857,56.774,69.944)
C8: (-47.989,58.332,72.261)
O2': (-50.583,55.127,69.996)
C6: (-48.647,57.650,75.644)
C5: (-48.445,57.761,74.259)
C4: (-48.807,56.679,73.466)
P: (-47.956,61.001,69.059)
C4': (-48.607,57.217,68.791)
C2': (-50.149,56.393,70.437)
C2: (-49.482,55.534,75.256)
N1: (-49.174,56.494,76.143)
N3: (-49.350,55.529,73.917)
N6: (-48.312,58.659,76.457)
N7: (-47.934,58.802,73.492)
N9: (-48.502,57.058,72.173)
O5': (-47.826,59.430,69.322)
O3': (-50.949,57.087,68.252)
Image (generated by PyMOL):