Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12481:12478
Extra
PDB:
ATOM 1 O3' G A2480 48.084 -47.287 59.480 1.00 41.26 O
ATOM 2 P U A2481 48.570 -48.099 60.760 1.00 38.04 P
ATOM 3 OP1 U A2481 49.966 -47.702 60.962 1.00 37.99 O
ATOM 4 OP2 U A2481 48.238 -49.529 60.524 1.00 38.40 O
ATOM 5 O5' U A2481 47.679 -47.534 61.953 1.00 37.83 O
ATOM 6 C5' U A2481 46.375 -48.043 62.234 1.00 37.90 C
ATOM 7 C4' U A2481 45.886 -47.552 63.578 1.00 37.73 C
ATOM 8 O4' U A2481 45.654 -46.128 63.531 1.00 37.38 O
ATOM 9 C3' U A2481 44.571 -48.081 64.061 1.00 37.82 C
ATOM 10 O3' U A2481 44.623 -49.419 64.475 1.00 38.15 O
ATOM 11 C2' U A2481 44.211 -47.076 65.156 1.00 37.55 C
ATOM 12 O2' U A2481 44.939 -47.285 66.377 1.00 37.60 O
ATOM 13 C1' U A2481 44.687 -45.777 64.492 1.00 37.26 C
ATOM 14 N1 U A2481 43.609 -45.122 63.785 1.00 37.10 N
ATOM 15 C2 U A2481 42.494 -44.712 64.472 1.00 36.98 C
ATOM 16 O2 U A2481 42.346 -44.812 65.693 1.00 36.98 O
ATOM 17 N3 U A2481 41.543 -44.169 63.646 1.00 36.87 N
ATOM 18 C4 U A2481 41.607 -44.006 62.269 1.00 36.87 C
ATOM 19 O4 U A2481 40.656 -43.487 61.681 1.00 36.77 O
ATOM 20 C5 U A2481 42.797 -44.472 61.642 1.00 37.00 C
ATOM 21 C6 U A2481 43.736 -45.009 62.425 1.00 37.11 C
ATOM 22 P G A2482 43.450 -50.430 64.021 1.00 45.75 P
ATOM 23 OP1 G A2482 43.793 -51.789 64.528 1.00 46.11 O
ATOM 24 OP2 G A2482 43.266 -50.238 62.573 1.00 45.74 O
ATOM 25 O5' G A2482 42.208 -49.860 64.836 1.00 45.57 O
TER
ATOM 1 O3' U B2477 38.460 -42.281 54.331 1.00 39.82 O
ATOM 2 P C B2478 39.826 -41.569 53.942 1.00 41.14 P
ATOM 3 OP1 C B2478 39.627 -40.122 54.136 1.00 40.83 O
ATOM 4 OP2 C B2478 40.214 -42.055 52.607 1.00 41.36 O
ATOM 5 O5' C B2478 40.825 -42.108 55.010 1.00 41.16 O
ATOM 6 C5' C B2478 40.697 -41.795 56.375 1.00 40.99 C
ATOM 7 C4' C B2478 41.798 -42.445 57.164 1.00 41.07 C
ATOM 8 O4' C B2478 41.566 -43.877 57.256 1.00 41.38 O
ATOM 9 C3' C B2478 43.185 -42.334 56.558 1.00 41.09 C
ATOM 10 O3' C B2478 43.783 -41.042 56.802 1.00 40.81 O
ATOM 11 C2' C B2478 43.906 -43.505 57.217 1.00 41.31 C
ATOM 12 O2' C B2478 44.215 -43.170 58.548 1.00 41.17 O
ATOM 13 C1' C B2478 42.796 -44.558 57.277 1.00 41.54 C
ATOM 14 N1 C B2478 42.822 -45.588 56.170 1.00 41.85 N
ATOM 15 C2 C B2478 42.116 -45.371 54.968 1.00 41.89 C
ATOM 16 O2 C B2478 41.572 -44.304 54.781 1.00 41.65 O
ATOM 17 N3 C B2478 41.968 -46.233 53.947 1.00 42.17 N
ATOM 18 C4 C B2478 42.549 -47.378 54.076 1.00 42.44 C
ATOM 19 N4 C B2478 42.375 -48.149 52.973 1.00 42.73 N
ATOM 20 C5 C B2478 43.275 -47.718 55.301 1.00 42.43 C
ATOM 21 C6 C B2478 43.361 -46.831 56.313 1.00 42.14 C
ATOM 22 P A B2479 45.219 -40.667 56.182 1.00 37.89 P
ATOM 23 OP1 A B2479 45.311 -39.189 56.068 1.00 37.60 O
ATOM 24 OP2 A B2479 45.364 -41.488 54.969 1.00 38.14 O
ATOM 25 O5' A B2479 46.216 -41.171 57.324 1.00 37.94 O
TER
ATOM 2 P U A2481 48.570 -48.099 60.760 1.00 38.04 P
ATOM 3 OP1 U A2481 49.966 -47.702 60.962 1.00 37.99 O
ATOM 4 OP2 U A2481 48.238 -49.529 60.524 1.00 38.40 O
ATOM 5 O5' U A2481 47.679 -47.534 61.953 1.00 37.83 O
ATOM 6 C5' U A2481 46.375 -48.043 62.234 1.00 37.90 C
ATOM 7 C4' U A2481 45.886 -47.552 63.578 1.00 37.73 C
ATOM 8 O4' U A2481 45.654 -46.128 63.531 1.00 37.38 O
ATOM 9 C3' U A2481 44.571 -48.081 64.061 1.00 37.82 C
ATOM 10 O3' U A2481 44.623 -49.419 64.475 1.00 38.15 O
ATOM 11 C2' U A2481 44.211 -47.076 65.156 1.00 37.55 C
ATOM 12 O2' U A2481 44.939 -47.285 66.377 1.00 37.60 O
ATOM 13 C1' U A2481 44.687 -45.777 64.492 1.00 37.26 C
ATOM 14 N1 U A2481 43.609 -45.122 63.785 1.00 37.10 N
ATOM 15 C2 U A2481 42.494 -44.712 64.472 1.00 36.98 C
ATOM 16 O2 U A2481 42.346 -44.812 65.693 1.00 36.98 O
ATOM 17 N3 U A2481 41.543 -44.169 63.646 1.00 36.87 N
ATOM 18 C4 U A2481 41.607 -44.006 62.269 1.00 36.87 C
ATOM 19 O4 U A2481 40.656 -43.487 61.681 1.00 36.77 O
ATOM 20 C5 U A2481 42.797 -44.472 61.642 1.00 37.00 C
ATOM 21 C6 U A2481 43.736 -45.009 62.425 1.00 37.11 C
ATOM 22 P G A2482 43.450 -50.430 64.021 1.00 45.75 P
ATOM 23 OP1 G A2482 43.793 -51.789 64.528 1.00 46.11 O
ATOM 24 OP2 G A2482 43.266 -50.238 62.573 1.00 45.74 O
ATOM 25 O5' G A2482 42.208 -49.860 64.836 1.00 45.57 O
TER
ATOM 1 O3' U B2477 38.460 -42.281 54.331 1.00 39.82 O
ATOM 2 P C B2478 39.826 -41.569 53.942 1.00 41.14 P
ATOM 3 OP1 C B2478 39.627 -40.122 54.136 1.00 40.83 O
ATOM 4 OP2 C B2478 40.214 -42.055 52.607 1.00 41.36 O
ATOM 5 O5' C B2478 40.825 -42.108 55.010 1.00 41.16 O
ATOM 6 C5' C B2478 40.697 -41.795 56.375 1.00 40.99 C
ATOM 7 C4' C B2478 41.798 -42.445 57.164 1.00 41.07 C
ATOM 8 O4' C B2478 41.566 -43.877 57.256 1.00 41.38 O
ATOM 9 C3' C B2478 43.185 -42.334 56.558 1.00 41.09 C
ATOM 10 O3' C B2478 43.783 -41.042 56.802 1.00 40.81 O
ATOM 11 C2' C B2478 43.906 -43.505 57.217 1.00 41.31 C
ATOM 12 O2' C B2478 44.215 -43.170 58.548 1.00 41.17 O
ATOM 13 C1' C B2478 42.796 -44.558 57.277 1.00 41.54 C
ATOM 14 N1 C B2478 42.822 -45.588 56.170 1.00 41.85 N
ATOM 15 C2 C B2478 42.116 -45.371 54.968 1.00 41.89 C
ATOM 16 O2 C B2478 41.572 -44.304 54.781 1.00 41.65 O
ATOM 17 N3 C B2478 41.968 -46.233 53.947 1.00 42.17 N
ATOM 18 C4 C B2478 42.549 -47.378 54.076 1.00 42.44 C
ATOM 19 N4 C B2478 42.375 -48.149 52.973 1.00 42.73 N
ATOM 20 C5 C B2478 43.275 -47.718 55.301 1.00 42.43 C
ATOM 21 C6 C B2478 43.361 -46.831 56.313 1.00 42.14 C
ATOM 22 P A B2479 45.219 -40.667 56.182 1.00 37.89 P
ATOM 23 OP1 A B2479 45.311 -39.189 56.068 1.00 37.60 O
ATOM 24 OP2 A B2479 45.364 -41.488 54.969 1.00 38.14 O
ATOM 25 O5' A B2479 46.216 -41.171 57.324 1.00 37.94 O
TER
Atoms:
C4: (41.607,-44.006,62.269)
N3: (41.543,-44.169,63.646)
OP1: (49.966,-47.702,60.962)
OP2: (48.238,-49.529,60.524)
C2: (42.494,-44.712,64.472)
C1': (44.687,-45.777,64.492)
C3': (44.571,-48.081,64.061)
O5': (47.679,-47.534,61.953)
O4': (45.654,-46.128,63.531)
C5': (46.375,-48.043,62.234)
P: (48.570,-48.099,60.760)
C4': (45.886,-47.552,63.578)
C2': (44.211,-47.076,65.156)
O2': (44.939,-47.285,66.377)
N1: (43.609,-45.122,63.785)
O4: (40.656,-43.487,61.681)
O2: (42.346,-44.812,65.693)
C6: (43.736,-45.009,62.425)
C5: (42.797,-44.472,61.642)
O3': (44.623,-49.419,64.475)
N3: (41.543,-44.169,63.646)
OP1: (49.966,-47.702,60.962)
OP2: (48.238,-49.529,60.524)
C2: (42.494,-44.712,64.472)
C1': (44.687,-45.777,64.492)
C3': (44.571,-48.081,64.061)
O5': (47.679,-47.534,61.953)
O4': (45.654,-46.128,63.531)
C5': (46.375,-48.043,62.234)
P: (48.570,-48.099,60.760)
C4': (45.886,-47.552,63.578)
C2': (44.211,-47.076,65.156)
O2': (44.939,-47.285,66.377)
N1: (43.609,-45.122,63.785)
O4: (40.656,-43.487,61.681)
O2: (42.346,-44.812,65.693)
C6: (43.736,-45.009,62.425)
C5: (42.797,-44.472,61.642)
O3': (44.623,-49.419,64.475)
C2: (42.116,-45.371,54.968)
OP1: (39.627,-40.122,54.136)
OP2: (40.214,-42.055,52.607)
C4: (42.549,-47.378,54.076)
O5': (40.825,-42.108,55.010)
C3': (43.185,-42.334,56.558)
C1': (42.796,-44.558,57.277)
O4': (41.566,-43.877,57.256)
C5': (40.697,-41.795,56.375)
P: (39.826,-41.569,53.942)
O2: (41.572,-44.304,54.781)
C4': (41.798,-42.445,57.164)
C2': (43.906,-43.505,57.217)
O2': (44.215,-43.170,58.548)
N1: (42.822,-45.588,56.170)
N3: (41.968,-46.233,53.947)
N4: (42.375,-48.149,52.973)
C6: (43.361,-46.831,56.313)
C5: (43.275,-47.718,55.301)
O3': (43.783,-41.042,56.802)
OP1: (39.627,-40.122,54.136)
OP2: (40.214,-42.055,52.607)
C4: (42.549,-47.378,54.076)
O5': (40.825,-42.108,55.010)
C3': (43.185,-42.334,56.558)
C1': (42.796,-44.558,57.277)
O4': (41.566,-43.877,57.256)
C5': (40.697,-41.795,56.375)
P: (39.826,-41.569,53.942)
O2: (41.572,-44.304,54.781)
C4': (41.798,-42.445,57.164)
C2': (43.906,-43.505,57.217)
O2': (44.215,-43.170,58.548)
N1: (42.822,-45.588,56.170)
N3: (41.968,-46.233,53.947)
N4: (42.375,-48.149,52.973)
C6: (43.361,-46.831,56.313)
C5: (43.275,-47.718,55.301)
O3': (43.783,-41.042,56.802)
Image (generated by PyMOL):