Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:385:11100
Extra
PDB:
ATOM 1 O3' G A 84 50.534 -14.997 22.914 1.00 42.61 O
ATOM 2 P U A 85 50.238 -14.596 24.442 1.00 33.72 P
ATOM 3 OP1 U A 85 51.513 -14.385 25.044 1.00 33.31 O
ATOM 4 OP2 U A 85 49.322 -15.588 25.053 1.00 33.45 O
ATOM 5 O5' U A 85 49.495 -13.228 24.304 1.00 33.81 O
ATOM 6 C5' U A 85 48.461 -13.101 23.361 1.00 34.40 C
ATOM 7 C4' U A 85 48.504 -11.791 22.687 1.00 34.77 C
ATOM 8 O4' U A 85 48.620 -10.767 23.697 1.00 34.19 O
ATOM 9 C3' U A 85 49.652 -11.604 21.706 1.00 35.27 C
ATOM 10 O3' U A 85 49.165 -11.060 20.503 1.00 35.99 O
ATOM 11 C2' U A 85 50.533 -10.569 22.389 1.00 34.84 C
ATOM 12 O2' U A 85 51.193 -9.692 21.511 1.00 35.32 O
ATOM 13 C1' U A 85 49.556 -9.820 23.287 1.00 34.37 C
ATOM 14 N1 U A 85 50.202 -9.260 24.470 1.00 33.68 N
ATOM 15 C2 U A 85 50.443 -7.914 24.504 1.00 33.67 C
ATOM 16 O2 U A 85 50.026 -7.242 23.616 1.00 34.20 O
ATOM 17 N3 U A 85 51.129 -7.424 25.597 1.00 33.04 N
ATOM 18 C4 U A 85 51.574 -8.268 26.626 1.00 32.43 C
ATOM 19 O4 U A 85 52.218 -7.853 27.595 1.00 31.88 O
ATOM 20 C5 U A 85 51.284 -9.656 26.491 1.00 32.50 C
ATOM 21 C6 U A 85 50.656 -10.111 25.426 1.00 33.12 C
ATOM 22 P G A 86 49.086 -11.932 19.158 1.00 44.45 P
ATOM 23 OP1 G A 86 50.327 -12.717 19.020 1.00 44.49 O
ATOM 24 OP2 G A 86 48.736 -11.002 18.099 1.00 45.08 O
ATOM 25 O5' G A 86 47.877 -12.897 19.416 1.00 44.37 O
TER
ATOM 1 O3' C B1099 49.858 -14.106 31.738 1.00 32.32 O
ATOM 2 P C B1100 51.276 -14.760 31.537 1.00 35.35 P
ATOM 3 OP1 C B1100 51.089 -16.049 30.895 1.00 35.55 O
ATOM 4 OP2 C B1100 51.930 -14.701 32.867 1.00 35.08 O
ATOM 5 O5' C B1100 51.983 -13.741 30.530 1.00 35.52 O
ATOM 6 C5' C B1100 51.598 -13.639 29.167 1.00 35.81 C
ATOM 7 C4' C B1100 52.471 -12.656 28.455 1.00 35.94 C
ATOM 8 O4' C B1100 52.358 -11.406 29.124 1.00 35.74 O
ATOM 9 C3' C B1100 53.959 -12.935 28.518 1.00 35.97 C
ATOM 10 O3' C B1100 54.400 -13.832 27.540 1.00 36.25 O
ATOM 11 C2' C B1100 54.576 -11.575 28.373 1.00 35.97 C
ATOM 12 O2' C B1100 54.560 -11.172 27.025 1.00 36.27 O
ATOM 13 C1' C B1100 53.593 -10.730 29.114 1.00 35.75 C
ATOM 14 N1 C B1100 53.999 -10.490 30.474 1.00 35.46 N
ATOM 15 C2 C B1100 55.031 -9.582 30.709 1.00 35.42 C
ATOM 16 O2 C B1100 55.633 -9.027 29.800 1.00 35.62 O
ATOM 17 N3 C B1100 55.383 -9.307 31.949 1.00 35.17 N
ATOM 18 C4 C B1100 54.724 -9.915 32.883 1.00 34.97 C
ATOM 19 N4 C B1100 55.120 -9.581 34.071 1.00 34.75 N
ATOM 20 C5 C B1100 53.676 -10.834 32.705 1.00 35.00 C
ATOM 21 C6 C B1100 53.335 -11.109 31.472 1.00 35.25 C
ATOM 22 P G B1101 55.369 -15.047 27.954 1.00 38.93 P
ATOM 23 OP1 G B1101 55.448 -15.925 26.742 1.00 39.27 O
ATOM 24 OP2 G B1101 54.862 -15.604 29.208 1.00 38.67 O
ATOM 25 O5' G B1101 56.744 -14.346 28.223 1.00 38.88 O
TER
ATOM 2 P U A 85 50.238 -14.596 24.442 1.00 33.72 P
ATOM 3 OP1 U A 85 51.513 -14.385 25.044 1.00 33.31 O
ATOM 4 OP2 U A 85 49.322 -15.588 25.053 1.00 33.45 O
ATOM 5 O5' U A 85 49.495 -13.228 24.304 1.00 33.81 O
ATOM 6 C5' U A 85 48.461 -13.101 23.361 1.00 34.40 C
ATOM 7 C4' U A 85 48.504 -11.791 22.687 1.00 34.77 C
ATOM 8 O4' U A 85 48.620 -10.767 23.697 1.00 34.19 O
ATOM 9 C3' U A 85 49.652 -11.604 21.706 1.00 35.27 C
ATOM 10 O3' U A 85 49.165 -11.060 20.503 1.00 35.99 O
ATOM 11 C2' U A 85 50.533 -10.569 22.389 1.00 34.84 C
ATOM 12 O2' U A 85 51.193 -9.692 21.511 1.00 35.32 O
ATOM 13 C1' U A 85 49.556 -9.820 23.287 1.00 34.37 C
ATOM 14 N1 U A 85 50.202 -9.260 24.470 1.00 33.68 N
ATOM 15 C2 U A 85 50.443 -7.914 24.504 1.00 33.67 C
ATOM 16 O2 U A 85 50.026 -7.242 23.616 1.00 34.20 O
ATOM 17 N3 U A 85 51.129 -7.424 25.597 1.00 33.04 N
ATOM 18 C4 U A 85 51.574 -8.268 26.626 1.00 32.43 C
ATOM 19 O4 U A 85 52.218 -7.853 27.595 1.00 31.88 O
ATOM 20 C5 U A 85 51.284 -9.656 26.491 1.00 32.50 C
ATOM 21 C6 U A 85 50.656 -10.111 25.426 1.00 33.12 C
ATOM 22 P G A 86 49.086 -11.932 19.158 1.00 44.45 P
ATOM 23 OP1 G A 86 50.327 -12.717 19.020 1.00 44.49 O
ATOM 24 OP2 G A 86 48.736 -11.002 18.099 1.00 45.08 O
ATOM 25 O5' G A 86 47.877 -12.897 19.416 1.00 44.37 O
TER
ATOM 1 O3' C B1099 49.858 -14.106 31.738 1.00 32.32 O
ATOM 2 P C B1100 51.276 -14.760 31.537 1.00 35.35 P
ATOM 3 OP1 C B1100 51.089 -16.049 30.895 1.00 35.55 O
ATOM 4 OP2 C B1100 51.930 -14.701 32.867 1.00 35.08 O
ATOM 5 O5' C B1100 51.983 -13.741 30.530 1.00 35.52 O
ATOM 6 C5' C B1100 51.598 -13.639 29.167 1.00 35.81 C
ATOM 7 C4' C B1100 52.471 -12.656 28.455 1.00 35.94 C
ATOM 8 O4' C B1100 52.358 -11.406 29.124 1.00 35.74 O
ATOM 9 C3' C B1100 53.959 -12.935 28.518 1.00 35.97 C
ATOM 10 O3' C B1100 54.400 -13.832 27.540 1.00 36.25 O
ATOM 11 C2' C B1100 54.576 -11.575 28.373 1.00 35.97 C
ATOM 12 O2' C B1100 54.560 -11.172 27.025 1.00 36.27 O
ATOM 13 C1' C B1100 53.593 -10.730 29.114 1.00 35.75 C
ATOM 14 N1 C B1100 53.999 -10.490 30.474 1.00 35.46 N
ATOM 15 C2 C B1100 55.031 -9.582 30.709 1.00 35.42 C
ATOM 16 O2 C B1100 55.633 -9.027 29.800 1.00 35.62 O
ATOM 17 N3 C B1100 55.383 -9.307 31.949 1.00 35.17 N
ATOM 18 C4 C B1100 54.724 -9.915 32.883 1.00 34.97 C
ATOM 19 N4 C B1100 55.120 -9.581 34.071 1.00 34.75 N
ATOM 20 C5 C B1100 53.676 -10.834 32.705 1.00 35.00 C
ATOM 21 C6 C B1100 53.335 -11.109 31.472 1.00 35.25 C
ATOM 22 P G B1101 55.369 -15.047 27.954 1.00 38.93 P
ATOM 23 OP1 G B1101 55.448 -15.925 26.742 1.00 39.27 O
ATOM 24 OP2 G B1101 54.862 -15.604 29.208 1.00 38.67 O
ATOM 25 O5' G B1101 56.744 -14.346 28.223 1.00 38.88 O
TER
Atoms:
C4: (51.574,-8.268,26.626)
N3: (51.129,-7.424,25.597)
OP1: (51.513,-14.385,25.044)
OP2: (49.322,-15.588,25.053)
C2: (50.443,-7.914,24.504)
C1': (49.556,-9.820,23.287)
C3': (49.652,-11.604,21.706)
O5': (49.495,-13.228,24.304)
O4': (48.620,-10.767,23.697)
C5': (48.461,-13.101,23.361)
P: (50.238,-14.596,24.442)
C4': (48.504,-11.791,22.687)
C2': (50.533,-10.569,22.389)
O2': (51.193,-9.692,21.511)
N1: (50.202,-9.260,24.470)
O4: (52.218,-7.853,27.595)
O2: (50.026,-7.242,23.616)
C6: (50.656,-10.111,25.426)
C5: (51.284,-9.656,26.491)
O3': (49.165,-11.060,20.503)
N3: (51.129,-7.424,25.597)
OP1: (51.513,-14.385,25.044)
OP2: (49.322,-15.588,25.053)
C2: (50.443,-7.914,24.504)
C1': (49.556,-9.820,23.287)
C3': (49.652,-11.604,21.706)
O5': (49.495,-13.228,24.304)
O4': (48.620,-10.767,23.697)
C5': (48.461,-13.101,23.361)
P: (50.238,-14.596,24.442)
C4': (48.504,-11.791,22.687)
C2': (50.533,-10.569,22.389)
O2': (51.193,-9.692,21.511)
N1: (50.202,-9.260,24.470)
O4: (52.218,-7.853,27.595)
O2: (50.026,-7.242,23.616)
C6: (50.656,-10.111,25.426)
C5: (51.284,-9.656,26.491)
O3': (49.165,-11.060,20.503)
C2: (55.031,-9.582,30.709)
OP1: (51.089,-16.049,30.895)
OP2: (51.930,-14.701,32.867)
C4: (54.724,-9.915,32.883)
O5': (51.983,-13.741,30.530)
C3': (53.959,-12.935,28.518)
C1': (53.593,-10.730,29.114)
O4': (52.358,-11.406,29.124)
C5': (51.598,-13.639,29.167)
P: (51.276,-14.760,31.537)
O2: (55.633,-9.027,29.800)
C4': (52.471,-12.656,28.455)
C2': (54.576,-11.575,28.373)
O2': (54.560,-11.172,27.025)
N1: (53.999,-10.490,30.474)
N3: (55.383,-9.307,31.949)
N4: (55.120,-9.581,34.071)
C6: (53.335,-11.109,31.472)
C5: (53.676,-10.834,32.705)
O3': (54.400,-13.832,27.540)
OP1: (51.089,-16.049,30.895)
OP2: (51.930,-14.701,32.867)
C4: (54.724,-9.915,32.883)
O5': (51.983,-13.741,30.530)
C3': (53.959,-12.935,28.518)
C1': (53.593,-10.730,29.114)
O4': (52.358,-11.406,29.124)
C5': (51.598,-13.639,29.167)
P: (51.276,-14.760,31.537)
O2: (55.633,-9.027,29.800)
C4': (52.471,-12.656,28.455)
C2': (54.576,-11.575,28.373)
O2': (54.560,-11.172,27.025)
N1: (53.999,-10.490,30.474)
N3: (55.383,-9.307,31.949)
N4: (55.120,-9.581,34.071)
C6: (53.335,-11.109,31.472)
C5: (53.676,-10.834,32.705)
O3': (54.400,-13.832,27.540)
Image (generated by PyMOL):