Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:499:498
Extra
PDB:
ATOM 1 O3' C A 98 61.320 9.724 134.408 1.00 58.00 O
ATOM 2 P U A 99 59.869 9.234 134.767 1.00 54.68 P
ATOM 3 OP1 U A 99 59.863 8.865 136.200 1.00 55.47 O
ATOM 4 OP2 U A 99 59.500 8.203 133.758 1.00 53.78 O
ATOM 5 O5' U A 99 59.017 10.530 134.539 1.00 54.75 O
ATOM 6 C5' U A 99 59.048 11.581 135.447 1.00 55.58 C
ATOM 7 C4' U A 99 58.596 12.812 134.771 1.00 55.44 C
ATOM 8 O4' U A 99 59.468 13.057 133.657 1.00 54.93 O
ATOM 9 C3' U A 99 57.223 12.725 134.169 1.00 54.88 C
ATOM 10 O3' U A 99 56.209 13.050 135.099 1.00 55.44 O
ATOM 11 C2' U A 99 57.293 13.673 132.975 1.00 54.42 C
ATOM 12 O2' U A 99 57.021 15.010 133.374 1.00 55.01 O
ATOM 13 C1' U A 99 58.761 13.582 132.581 1.00 54.34 C
ATOM 14 N1 U A 99 59.005 12.715 131.435 1.00 53.46 N
ATOM 15 C2 U A 99 58.395 12.878 130.208 1.00 52.71 C
ATOM 16 O2 U A 99 57.532 13.721 129.974 1.00 52.70 O
ATOM 17 N3 U A 99 58.805 11.979 129.234 1.00 51.98 N
ATOM 18 C4 U A 99 59.748 10.978 129.340 1.00 51.92 C
ATOM 19 O4 U A 99 60.008 10.257 128.372 1.00 51.25 O
ATOM 20 C5 U A 99 60.328 10.898 130.648 1.00 52.72 C
ATOM 21 C6 U A 99 59.956 11.748 131.612 1.00 53.44 C
ATOM 22 P U A 100 55.061 11.979 135.467 1.00 63.62 P
ATOM 23 OP1 U A 100 54.367 12.511 136.666 1.00 64.46 O
ATOM 24 OP2 U A 100 55.697 10.637 135.540 1.00 63.38 O
ATOM 25 O5' U A 100 54.091 12.029 134.212 1.00 62.78 O
TER
ATOM 1 O3' U B 97 65.237 10.023 139.053 1.00 58.11 O
ATOM 2 P C B 98 63.719 9.426 138.965 1.00 61.15 P
ATOM 3 OP1 C B 98 62.801 10.478 139.484 1.00 61.61 O
ATOM 4 OP2 C B 98 63.726 8.093 139.632 1.00 61.25 O
ATOM 5 O5' C B 98 63.487 9.235 137.405 1.00 60.07 O
ATOM 6 C5' C B 98 63.670 10.296 136.495 1.00 59.80 C
ATOM 7 C4' C B 98 63.633 9.781 135.095 1.00 58.80 C
ATOM 8 O4' C B 98 64.751 8.897 134.866 1.00 58.65 O
ATOM 9 C3' C B 98 62.423 8.938 134.748 1.00 58.19 C
ATOM 10 O3' C B 98 61.320 9.724 134.408 1.00 58.00 O
ATOM 11 C2' C B 98 62.912 8.072 133.599 1.00 57.38 C
ATOM 12 O2' C B 98 62.822 8.769 132.364 1.00 56.80 O
ATOM 13 C1' C B 98 64.386 7.884 133.955 1.00 57.80 C
ATOM 14 N1 C B 98 64.625 6.607 134.590 1.00 57.94 N
ATOM 15 C2 C B 98 64.969 5.522 133.811 1.00 57.31 C
ATOM 16 O2 C B 98 65.052 5.695 132.601 1.00 56.66 O
ATOM 17 N3 C B 98 65.201 4.335 134.392 1.00 57.46 N
ATOM 18 C4 C B 98 65.090 4.250 135.724 1.00 58.21 C
ATOM 19 N4 C B 98 65.329 3.083 136.335 1.00 58.40 N
ATOM 20 C5 C B 98 64.730 5.363 136.541 1.00 58.87 C
ATOM 21 C6 C B 98 64.507 6.521 135.931 1.00 58.70 C
ATOM 22 P U B 99 59.869 9.234 134.767 1.00 54.68 P
ATOM 23 OP1 U B 99 59.863 8.865 136.200 1.00 55.47 O
ATOM 24 OP2 U B 99 59.500 8.203 133.758 1.00 53.78 O
ATOM 25 O5' U B 99 59.017 10.530 134.539 1.00 54.75 O
TER
ATOM 2 P U A 99 59.869 9.234 134.767 1.00 54.68 P
ATOM 3 OP1 U A 99 59.863 8.865 136.200 1.00 55.47 O
ATOM 4 OP2 U A 99 59.500 8.203 133.758 1.00 53.78 O
ATOM 5 O5' U A 99 59.017 10.530 134.539 1.00 54.75 O
ATOM 6 C5' U A 99 59.048 11.581 135.447 1.00 55.58 C
ATOM 7 C4' U A 99 58.596 12.812 134.771 1.00 55.44 C
ATOM 8 O4' U A 99 59.468 13.057 133.657 1.00 54.93 O
ATOM 9 C3' U A 99 57.223 12.725 134.169 1.00 54.88 C
ATOM 10 O3' U A 99 56.209 13.050 135.099 1.00 55.44 O
ATOM 11 C2' U A 99 57.293 13.673 132.975 1.00 54.42 C
ATOM 12 O2' U A 99 57.021 15.010 133.374 1.00 55.01 O
ATOM 13 C1' U A 99 58.761 13.582 132.581 1.00 54.34 C
ATOM 14 N1 U A 99 59.005 12.715 131.435 1.00 53.46 N
ATOM 15 C2 U A 99 58.395 12.878 130.208 1.00 52.71 C
ATOM 16 O2 U A 99 57.532 13.721 129.974 1.00 52.70 O
ATOM 17 N3 U A 99 58.805 11.979 129.234 1.00 51.98 N
ATOM 18 C4 U A 99 59.748 10.978 129.340 1.00 51.92 C
ATOM 19 O4 U A 99 60.008 10.257 128.372 1.00 51.25 O
ATOM 20 C5 U A 99 60.328 10.898 130.648 1.00 52.72 C
ATOM 21 C6 U A 99 59.956 11.748 131.612 1.00 53.44 C
ATOM 22 P U A 100 55.061 11.979 135.467 1.00 63.62 P
ATOM 23 OP1 U A 100 54.367 12.511 136.666 1.00 64.46 O
ATOM 24 OP2 U A 100 55.697 10.637 135.540 1.00 63.38 O
ATOM 25 O5' U A 100 54.091 12.029 134.212 1.00 62.78 O
TER
ATOM 1 O3' U B 97 65.237 10.023 139.053 1.00 58.11 O
ATOM 2 P C B 98 63.719 9.426 138.965 1.00 61.15 P
ATOM 3 OP1 C B 98 62.801 10.478 139.484 1.00 61.61 O
ATOM 4 OP2 C B 98 63.726 8.093 139.632 1.00 61.25 O
ATOM 5 O5' C B 98 63.487 9.235 137.405 1.00 60.07 O
ATOM 6 C5' C B 98 63.670 10.296 136.495 1.00 59.80 C
ATOM 7 C4' C B 98 63.633 9.781 135.095 1.00 58.80 C
ATOM 8 O4' C B 98 64.751 8.897 134.866 1.00 58.65 O
ATOM 9 C3' C B 98 62.423 8.938 134.748 1.00 58.19 C
ATOM 10 O3' C B 98 61.320 9.724 134.408 1.00 58.00 O
ATOM 11 C2' C B 98 62.912 8.072 133.599 1.00 57.38 C
ATOM 12 O2' C B 98 62.822 8.769 132.364 1.00 56.80 O
ATOM 13 C1' C B 98 64.386 7.884 133.955 1.00 57.80 C
ATOM 14 N1 C B 98 64.625 6.607 134.590 1.00 57.94 N
ATOM 15 C2 C B 98 64.969 5.522 133.811 1.00 57.31 C
ATOM 16 O2 C B 98 65.052 5.695 132.601 1.00 56.66 O
ATOM 17 N3 C B 98 65.201 4.335 134.392 1.00 57.46 N
ATOM 18 C4 C B 98 65.090 4.250 135.724 1.00 58.21 C
ATOM 19 N4 C B 98 65.329 3.083 136.335 1.00 58.40 N
ATOM 20 C5 C B 98 64.730 5.363 136.541 1.00 58.87 C
ATOM 21 C6 C B 98 64.507 6.521 135.931 1.00 58.70 C
ATOM 22 P U B 99 59.869 9.234 134.767 1.00 54.68 P
ATOM 23 OP1 U B 99 59.863 8.865 136.200 1.00 55.47 O
ATOM 24 OP2 U B 99 59.500 8.203 133.758 1.00 53.78 O
ATOM 25 O5' U B 99 59.017 10.530 134.539 1.00 54.75 O
TER
Atoms:
C4: (59.748,10.978,129.340)
N3: (58.805,11.979,129.234)
OP1: (59.863,8.865,136.200)
OP2: (59.500,8.203,133.758)
C2: (58.395,12.878,130.208)
C1': (58.761,13.582,132.581)
C3': (57.223,12.725,134.169)
O5': (59.017,10.530,134.539)
O4': (59.468,13.057,133.657)
C5': (59.048,11.581,135.447)
P: (59.869,9.234,134.767)
C4': (58.596,12.812,134.771)
C2': (57.293,13.673,132.975)
O2': (57.021,15.010,133.374)
N1: (59.005,12.715,131.435)
O4: (60.008,10.257,128.372)
O2: (57.532,13.721,129.974)
C6: (59.956,11.748,131.612)
C5: (60.328,10.898,130.648)
O3': (56.209,13.050,135.099)
N3: (58.805,11.979,129.234)
OP1: (59.863,8.865,136.200)
OP2: (59.500,8.203,133.758)
C2: (58.395,12.878,130.208)
C1': (58.761,13.582,132.581)
C3': (57.223,12.725,134.169)
O5': (59.017,10.530,134.539)
O4': (59.468,13.057,133.657)
C5': (59.048,11.581,135.447)
P: (59.869,9.234,134.767)
C4': (58.596,12.812,134.771)
C2': (57.293,13.673,132.975)
O2': (57.021,15.010,133.374)
N1: (59.005,12.715,131.435)
O4: (60.008,10.257,128.372)
O2: (57.532,13.721,129.974)
C6: (59.956,11.748,131.612)
C5: (60.328,10.898,130.648)
O3': (56.209,13.050,135.099)
C2: (64.969,5.522,133.811)
OP1: (62.801,10.478,139.484)
OP2: (63.726,8.093,139.632)
C4: (65.090,4.250,135.724)
O5': (63.487,9.235,137.405)
C3': (62.423,8.938,134.748)
C1': (64.386,7.884,133.955)
O4': (64.751,8.897,134.866)
C5': (63.670,10.296,136.495)
P: (63.719,9.426,138.965)
O2: (65.052,5.695,132.601)
C4': (63.633,9.781,135.095)
C2': (62.912,8.072,133.599)
O2': (62.822,8.769,132.364)
N1: (64.625,6.607,134.590)
N3: (65.201,4.335,134.392)
N4: (65.329,3.083,136.335)
C6: (64.507,6.521,135.931)
C5: (64.730,5.363,136.541)
O3': (61.320,9.724,134.408)
OP1: (62.801,10.478,139.484)
OP2: (63.726,8.093,139.632)
C4: (65.090,4.250,135.724)
O5': (63.487,9.235,137.405)
C3': (62.423,8.938,134.748)
C1': (64.386,7.884,133.955)
O4': (64.751,8.897,134.866)
C5': (63.670,10.296,136.495)
P: (63.719,9.426,138.965)
O2: (65.052,5.695,132.601)
C4': (63.633,9.781,135.095)
C2': (62.912,8.072,133.599)
O2': (62.822,8.769,132.364)
N1: (64.625,6.607,134.590)
N3: (65.201,4.335,134.392)
N4: (65.329,3.083,136.335)
C6: (64.507,6.521,135.931)
C5: (64.730,5.363,136.541)
O3': (61.320,9.724,134.408)
Image (generated by PyMOL):