Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:A5:B39
Extra
PDB:
ATOM 1 O3' C A 4 10.990 -24.907 1.496 1.00 75.74 O
ATOM 2 P U A 5 11.290 -25.890 2.724 1.00 73.84 P
ATOM 3 OP1 U A 5 12.628 -25.555 3.268 1.00 72.91 O
ATOM 4 OP2 U A 5 10.990 -27.280 2.307 1.00 73.66 O
ATOM 5 O5' U A 5 10.170 -25.464 3.780 1.00 72.59 O
ATOM 6 C5' U A 5 10.197 -24.170 4.368 1.00 71.59 C
ATOM 7 C4' U A 5 8.917 -23.920 5.136 1.00 70.53 C
ATOM 8 O4' U A 5 7.776 -23.996 4.241 1.00 71.06 O
ATOM 9 C3' U A 5 8.595 -24.955 6.199 1.00 68.96 C
ATOM 10 O3' U A 5 9.371 -24.757 7.371 1.00 67.25 O
ATOM 11 C2' U A 5 7.108 -24.685 6.398 1.00 69.40 C
ATOM 12 O2' U A 5 6.847 -23.510 7.134 1.00 69.97 O
ATOM 13 C1' U A 5 6.655 -24.494 4.952 1.00 70.25 C
ATOM 14 N1 U A 5 6.136 -25.768 4.341 1.00 70.03 N
ATOM 15 C2 U A 5 4.841 -26.167 4.639 1.00 69.97 C
ATOM 16 O2 U A 5 4.091 -25.538 5.365 1.00 69.55 O
ATOM 17 N3 U A 5 4.442 -27.345 4.049 1.00 70.25 N
ATOM 18 C4 U A 5 5.191 -28.154 3.210 1.00 70.64 C
ATOM 19 O4 U A 5 4.693 -29.182 2.757 1.00 70.96 O
ATOM 20 C5 U A 5 6.531 -27.680 2.946 1.00 70.55 C
ATOM 21 C6 U A 5 6.941 -26.533 3.509 1.00 70.22 C
ATOM 22 P G A 6 9.793 -26.016 8.270 1.00 65.62 P
ATOM 23 OP1 G A 6 10.981 -25.633 9.067 1.00 65.09 O
ATOM 24 OP2 G A 6 9.832 -27.239 7.433 1.00 65.06 O
ATOM 25 O5' G A 6 8.534 -26.139 9.244 1.00 65.03 O
TER
ATOM 1 O3' C B 38 6.707 -17.692 14.114 1.00 71.78 O
ATOM 2 P A B 39 7.461 -17.028 12.869 1.00 71.71 P
ATOM 3 OP1 A B 39 8.852 -16.753 13.300 1.00 71.46 O
ATOM 4 OP2 A B 39 6.623 -15.941 12.308 1.00 72.04 O
ATOM 5 O5' A B 39 7.465 -18.234 11.821 1.00 70.41 O
ATOM 6 C5' A B 39 8.401 -19.287 11.979 1.00 69.28 C
ATOM 7 C4' A B 39 8.263 -20.290 10.854 1.00 68.82 C
ATOM 8 O4' A B 39 7.020 -21.012 11.016 1.00 68.55 O
ATOM 9 C3' A B 39 8.164 -19.714 9.451 1.00 69.16 C
ATOM 10 O3' A B 39 9.462 -19.375 8.960 1.00 69.88 O
ATOM 11 C2' A B 39 7.549 -20.899 8.716 1.00 68.51 C
ATOM 12 O2' A B 39 8.488 -21.911 8.396 1.00 67.98 O
ATOM 13 C1' A B 39 6.563 -21.439 9.749 1.00 67.94 C
ATOM 14 N9 A B 39 5.189 -20.981 9.556 1.00 67.72 N
ATOM 15 C8 A B 39 4.583 -19.905 10.148 1.00 68.23 C
ATOM 16 N7 A B 39 3.332 -19.731 9.789 1.00 68.27 N
ATOM 17 C5 A B 39 3.100 -20.765 8.898 1.00 67.68 C
ATOM 18 C6 A B 39 1.960 -21.144 8.156 1.00 67.75 C
ATOM 19 N6 A B 39 0.799 -20.482 8.206 1.00 68.30 N
ATOM 20 N1 A B 39 2.060 -22.230 7.356 1.00 67.30 N
ATOM 21 C2 A B 39 3.225 -22.892 7.306 1.00 66.76 C
ATOM 22 N3 A B 39 4.361 -22.630 7.956 1.00 66.39 N
ATOM 23 C4 A B 39 4.233 -21.547 8.743 1.00 67.21 C
ATOM 24 P A B 40 9.721 -18.116 7.995 1.00 70.86 P
ATOM 25 OP1 A B 40 11.188 -17.937 7.923 1.00 70.77 O
ATOM 26 OP2 A B 40 8.867 -16.978 8.407 1.00 71.20 O
ATOM 27 O5' A B 40 9.173 -18.626 6.582 1.00 71.39 O
TER
ATOM 2 P U A 5 11.290 -25.890 2.724 1.00 73.84 P
ATOM 3 OP1 U A 5 12.628 -25.555 3.268 1.00 72.91 O
ATOM 4 OP2 U A 5 10.990 -27.280 2.307 1.00 73.66 O
ATOM 5 O5' U A 5 10.170 -25.464 3.780 1.00 72.59 O
ATOM 6 C5' U A 5 10.197 -24.170 4.368 1.00 71.59 C
ATOM 7 C4' U A 5 8.917 -23.920 5.136 1.00 70.53 C
ATOM 8 O4' U A 5 7.776 -23.996 4.241 1.00 71.06 O
ATOM 9 C3' U A 5 8.595 -24.955 6.199 1.00 68.96 C
ATOM 10 O3' U A 5 9.371 -24.757 7.371 1.00 67.25 O
ATOM 11 C2' U A 5 7.108 -24.685 6.398 1.00 69.40 C
ATOM 12 O2' U A 5 6.847 -23.510 7.134 1.00 69.97 O
ATOM 13 C1' U A 5 6.655 -24.494 4.952 1.00 70.25 C
ATOM 14 N1 U A 5 6.136 -25.768 4.341 1.00 70.03 N
ATOM 15 C2 U A 5 4.841 -26.167 4.639 1.00 69.97 C
ATOM 16 O2 U A 5 4.091 -25.538 5.365 1.00 69.55 O
ATOM 17 N3 U A 5 4.442 -27.345 4.049 1.00 70.25 N
ATOM 18 C4 U A 5 5.191 -28.154 3.210 1.00 70.64 C
ATOM 19 O4 U A 5 4.693 -29.182 2.757 1.00 70.96 O
ATOM 20 C5 U A 5 6.531 -27.680 2.946 1.00 70.55 C
ATOM 21 C6 U A 5 6.941 -26.533 3.509 1.00 70.22 C
ATOM 22 P G A 6 9.793 -26.016 8.270 1.00 65.62 P
ATOM 23 OP1 G A 6 10.981 -25.633 9.067 1.00 65.09 O
ATOM 24 OP2 G A 6 9.832 -27.239 7.433 1.00 65.06 O
ATOM 25 O5' G A 6 8.534 -26.139 9.244 1.00 65.03 O
TER
ATOM 1 O3' C B 38 6.707 -17.692 14.114 1.00 71.78 O
ATOM 2 P A B 39 7.461 -17.028 12.869 1.00 71.71 P
ATOM 3 OP1 A B 39 8.852 -16.753 13.300 1.00 71.46 O
ATOM 4 OP2 A B 39 6.623 -15.941 12.308 1.00 72.04 O
ATOM 5 O5' A B 39 7.465 -18.234 11.821 1.00 70.41 O
ATOM 6 C5' A B 39 8.401 -19.287 11.979 1.00 69.28 C
ATOM 7 C4' A B 39 8.263 -20.290 10.854 1.00 68.82 C
ATOM 8 O4' A B 39 7.020 -21.012 11.016 1.00 68.55 O
ATOM 9 C3' A B 39 8.164 -19.714 9.451 1.00 69.16 C
ATOM 10 O3' A B 39 9.462 -19.375 8.960 1.00 69.88 O
ATOM 11 C2' A B 39 7.549 -20.899 8.716 1.00 68.51 C
ATOM 12 O2' A B 39 8.488 -21.911 8.396 1.00 67.98 O
ATOM 13 C1' A B 39 6.563 -21.439 9.749 1.00 67.94 C
ATOM 14 N9 A B 39 5.189 -20.981 9.556 1.00 67.72 N
ATOM 15 C8 A B 39 4.583 -19.905 10.148 1.00 68.23 C
ATOM 16 N7 A B 39 3.332 -19.731 9.789 1.00 68.27 N
ATOM 17 C5 A B 39 3.100 -20.765 8.898 1.00 67.68 C
ATOM 18 C6 A B 39 1.960 -21.144 8.156 1.00 67.75 C
ATOM 19 N6 A B 39 0.799 -20.482 8.206 1.00 68.30 N
ATOM 20 N1 A B 39 2.060 -22.230 7.356 1.00 67.30 N
ATOM 21 C2 A B 39 3.225 -22.892 7.306 1.00 66.76 C
ATOM 22 N3 A B 39 4.361 -22.630 7.956 1.00 66.39 N
ATOM 23 C4 A B 39 4.233 -21.547 8.743 1.00 67.21 C
ATOM 24 P A B 40 9.721 -18.116 7.995 1.00 70.86 P
ATOM 25 OP1 A B 40 11.188 -17.937 7.923 1.00 70.77 O
ATOM 26 OP2 A B 40 8.867 -16.978 8.407 1.00 71.20 O
ATOM 27 O5' A B 40 9.173 -18.626 6.582 1.00 71.39 O
TER
Atoms:
C4: (5.191,-28.154,3.210)
N3: (4.442,-27.345,4.049)
OP1: (12.628,-25.555,3.268)
OP2: (10.990,-27.280,2.307)
C2: (4.841,-26.167,4.639)
C1': (6.655,-24.494,4.952)
C3': (8.595,-24.955,6.199)
O5': (10.170,-25.464,3.780)
O4': (7.776,-23.996,4.241)
C5': (10.197,-24.170,4.368)
P: (11.290,-25.890,2.724)
C4': (8.917,-23.920,5.136)
C2': (7.108,-24.685,6.398)
O2': (6.847,-23.510,7.134)
N1: (6.136,-25.768,4.341)
O4: (4.693,-29.182,2.757)
O2: (4.091,-25.538,5.365)
C6: (6.941,-26.533,3.509)
C5: (6.531,-27.680,2.946)
O3': (9.371,-24.757,7.371)
N3: (4.442,-27.345,4.049)
OP1: (12.628,-25.555,3.268)
OP2: (10.990,-27.280,2.307)
C2: (4.841,-26.167,4.639)
C1': (6.655,-24.494,4.952)
C3': (8.595,-24.955,6.199)
O5': (10.170,-25.464,3.780)
O4': (7.776,-23.996,4.241)
C5': (10.197,-24.170,4.368)
P: (11.290,-25.890,2.724)
C4': (8.917,-23.920,5.136)
C2': (7.108,-24.685,6.398)
O2': (6.847,-23.510,7.134)
N1: (6.136,-25.768,4.341)
O4: (4.693,-29.182,2.757)
O2: (4.091,-25.538,5.365)
C6: (6.941,-26.533,3.509)
C5: (6.531,-27.680,2.946)
O3': (9.371,-24.757,7.371)
OP1: (8.852,-16.753,13.300)
OP2: (6.623,-15.941,12.308)
C3': (8.164,-19.714,9.451)
C1': (6.563,-21.439,9.749)
C5': (8.401,-19.287,11.979)
O4': (7.020,-21.012,11.016)
C8: (4.583,-19.905,10.148)
O2': (8.488,-21.911,8.396)
C6: (1.960,-21.144,8.156)
C5: (3.100,-20.765,8.898)
C4: (4.233,-21.547,8.743)
P: (7.461,-17.028,12.869)
C4': (8.263,-20.290,10.854)
C2': (7.549,-20.899,8.716)
C2: (3.225,-22.892,7.306)
N1: (2.060,-22.230,7.356)
N3: (4.361,-22.630,7.956)
N6: (0.799,-20.482,8.206)
N7: (3.332,-19.731,9.789)
N9: (5.189,-20.981,9.556)
O5': (7.465,-18.234,11.821)
O3': (9.462,-19.375,8.960)
OP2: (6.623,-15.941,12.308)
C3': (8.164,-19.714,9.451)
C1': (6.563,-21.439,9.749)
C5': (8.401,-19.287,11.979)
O4': (7.020,-21.012,11.016)
C8: (4.583,-19.905,10.148)
O2': (8.488,-21.911,8.396)
C6: (1.960,-21.144,8.156)
C5: (3.100,-20.765,8.898)
C4: (4.233,-21.547,8.743)
P: (7.461,-17.028,12.869)
C4': (8.263,-20.290,10.854)
C2': (7.549,-20.899,8.716)
C2: (3.225,-22.892,7.306)
N1: (2.060,-22.230,7.356)
N3: (4.361,-22.630,7.956)
N6: (0.799,-20.482,8.206)
N7: (3.332,-19.731,9.789)
N9: (5.189,-20.981,9.556)
O5': (7.465,-18.234,11.821)
O3': (9.462,-19.375,8.960)
Image (generated by PyMOL):