Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0236:0237
Extra
PDB:
ATOM 1 O3' A A 235 91.692 124.245 -8.193 1.00 59.72 O
ATOM 2 P A A 236 91.150 124.961 -9.520 1.00 61.43 P
ATOM 3 OP1 A A 236 92.215 124.834 -10.550 1.00 61.63 O
ATOM 4 OP2 A A 236 90.656 126.307 -9.127 1.00 60.13 O
ATOM 5 O5' A A 236 89.894 124.084 -9.968 1.00 59.69 O
ATOM 6 C5' A A 236 88.675 124.063 -9.190 1.00 56.89 C
ATOM 7 C4' A A 236 87.779 122.936 -9.653 1.00 55.26 C
ATOM 8 O4' A A 236 88.567 121.730 -9.778 1.00 54.85 O
ATOM 9 C3' A A 236 86.659 122.567 -8.694 1.00 55.18 C
ATOM 10 O3' A A 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 11 C2' A A 236 86.383 121.104 -9.033 1.00 54.82 C
ATOM 12 O2' A A 236 85.463 120.943 -10.092 1.00 53.24 O
ATOM 13 C1' A A 236 87.767 120.608 -9.465 1.00 54.91 C
ATOM 14 N9 A A 236 88.509 119.773 -8.524 1.00 56.89 N
ATOM 15 C8 A A 236 89.060 118.543 -8.782 1.00 58.41 C
ATOM 16 N7 A A 236 89.734 118.041 -7.776 1.00 59.08 N
ATOM 17 C5 A A 236 89.604 118.997 -6.780 1.00 58.98 C
ATOM 18 C6 A A 236 90.094 119.063 -5.467 1.00 59.31 C
ATOM 19 N6 A A 236 90.842 118.110 -4.906 1.00 58.56 N
ATOM 20 N1 A A 236 89.783 120.155 -4.738 1.00 60.61 N
ATOM 21 C2 A A 236 89.025 121.108 -5.298 1.00 60.66 C
ATOM 22 N3 A A 236 88.505 121.160 -6.521 1.00 59.74 N
ATOM 23 C4 A A 236 88.838 120.063 -7.222 1.00 58.61 C
ATOM 24 P G A 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 25 OP1 G A 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 26 OP2 G A 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 27 O5' G A 237 85.569 124.299 -6.594 1.00 61.84 O
TER
ATOM 1 O3' A B 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 2 P G B 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 3 OP1 G B 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 4 OP2 G B 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 5 O5' G B 237 85.569 124.299 -6.594 1.00 61.84 O
ATOM 6 C5' G B 237 84.851 123.254 -5.919 1.00 60.39 C
ATOM 7 C4' G B 237 84.990 123.415 -4.427 1.00 59.68 C
ATOM 8 O4' G B 237 86.383 123.266 -4.043 1.00 59.08 O
ATOM 9 C3' G B 237 84.597 124.773 -3.873 1.00 57.75 C
ATOM 10 O3' G B 237 83.186 124.861 -3.704 1.00 57.11 O
ATOM 11 C2' G B 237 85.345 124.800 -2.550 1.00 58.43 C
ATOM 12 O2' G B 237 84.690 124.057 -1.545 1.00 59.54 O
ATOM 13 C1' G B 237 86.651 124.093 -2.925 1.00 58.98 C
ATOM 14 N9 G B 237 87.717 125.024 -3.279 1.00 60.09 N
ATOM 15 C8 G B 237 88.237 125.272 -4.527 1.00 61.29 C
ATOM 16 N7 G B 237 89.173 126.182 -4.519 1.00 61.24 N
ATOM 17 C5 G B 237 89.281 126.553 -3.186 1.00 61.34 C
ATOM 18 C6 G B 237 90.129 127.502 -2.559 1.00 61.23 C
ATOM 19 O6 G B 237 90.987 128.232 -3.074 1.00 61.81 O
ATOM 20 N1 G B 237 89.905 127.557 -1.188 1.00 61.33 N
ATOM 21 C2 G B 237 88.987 126.798 -0.506 1.00 60.50 C
ATOM 22 N2 G B 237 88.916 126.990 0.814 1.00 60.33 N
ATOM 23 N3 G B 237 88.195 125.915 -1.077 1.00 60.98 N
ATOM 24 C4 G B 237 88.393 125.843 -2.408 1.00 61.14 C
ATOM 25 P C B 238 82.485 126.298 -3.520 1.00 58.11 P
ATOM 26 OP1 C B 238 81.017 126.074 -3.534 1.00 57.50 O
ATOM 27 OP2 C B 238 83.084 127.264 -4.480 1.00 56.10 O
ATOM 28 O5' C B 238 82.897 126.730 -2.040 1.00 58.12 O
TER
ATOM 2 P A A 236 91.150 124.961 -9.520 1.00 61.43 P
ATOM 3 OP1 A A 236 92.215 124.834 -10.550 1.00 61.63 O
ATOM 4 OP2 A A 236 90.656 126.307 -9.127 1.00 60.13 O
ATOM 5 O5' A A 236 89.894 124.084 -9.968 1.00 59.69 O
ATOM 6 C5' A A 236 88.675 124.063 -9.190 1.00 56.89 C
ATOM 7 C4' A A 236 87.779 122.936 -9.653 1.00 55.26 C
ATOM 8 O4' A A 236 88.567 121.730 -9.778 1.00 54.85 O
ATOM 9 C3' A A 236 86.659 122.567 -8.694 1.00 55.18 C
ATOM 10 O3' A A 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 11 C2' A A 236 86.383 121.104 -9.033 1.00 54.82 C
ATOM 12 O2' A A 236 85.463 120.943 -10.092 1.00 53.24 O
ATOM 13 C1' A A 236 87.767 120.608 -9.465 1.00 54.91 C
ATOM 14 N9 A A 236 88.509 119.773 -8.524 1.00 56.89 N
ATOM 15 C8 A A 236 89.060 118.543 -8.782 1.00 58.41 C
ATOM 16 N7 A A 236 89.734 118.041 -7.776 1.00 59.08 N
ATOM 17 C5 A A 236 89.604 118.997 -6.780 1.00 58.98 C
ATOM 18 C6 A A 236 90.094 119.063 -5.467 1.00 59.31 C
ATOM 19 N6 A A 236 90.842 118.110 -4.906 1.00 58.56 N
ATOM 20 N1 A A 236 89.783 120.155 -4.738 1.00 60.61 N
ATOM 21 C2 A A 236 89.025 121.108 -5.298 1.00 60.66 C
ATOM 22 N3 A A 236 88.505 121.160 -6.521 1.00 59.74 N
ATOM 23 C4 A A 236 88.838 120.063 -7.222 1.00 58.61 C
ATOM 24 P G A 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 25 OP1 G A 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 26 OP2 G A 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 27 O5' G A 237 85.569 124.299 -6.594 1.00 61.84 O
TER
ATOM 1 O3' A B 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 2 P G B 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 3 OP1 G B 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 4 OP2 G B 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 5 O5' G B 237 85.569 124.299 -6.594 1.00 61.84 O
ATOM 6 C5' G B 237 84.851 123.254 -5.919 1.00 60.39 C
ATOM 7 C4' G B 237 84.990 123.415 -4.427 1.00 59.68 C
ATOM 8 O4' G B 237 86.383 123.266 -4.043 1.00 59.08 O
ATOM 9 C3' G B 237 84.597 124.773 -3.873 1.00 57.75 C
ATOM 10 O3' G B 237 83.186 124.861 -3.704 1.00 57.11 O
ATOM 11 C2' G B 237 85.345 124.800 -2.550 1.00 58.43 C
ATOM 12 O2' G B 237 84.690 124.057 -1.545 1.00 59.54 O
ATOM 13 C1' G B 237 86.651 124.093 -2.925 1.00 58.98 C
ATOM 14 N9 G B 237 87.717 125.024 -3.279 1.00 60.09 N
ATOM 15 C8 G B 237 88.237 125.272 -4.527 1.00 61.29 C
ATOM 16 N7 G B 237 89.173 126.182 -4.519 1.00 61.24 N
ATOM 17 C5 G B 237 89.281 126.553 -3.186 1.00 61.34 C
ATOM 18 C6 G B 237 90.129 127.502 -2.559 1.00 61.23 C
ATOM 19 O6 G B 237 90.987 128.232 -3.074 1.00 61.81 O
ATOM 20 N1 G B 237 89.905 127.557 -1.188 1.00 61.33 N
ATOM 21 C2 G B 237 88.987 126.798 -0.506 1.00 60.50 C
ATOM 22 N2 G B 237 88.916 126.990 0.814 1.00 60.33 N
ATOM 23 N3 G B 237 88.195 125.915 -1.077 1.00 60.98 N
ATOM 24 C4 G B 237 88.393 125.843 -2.408 1.00 61.14 C
ATOM 25 P C B 238 82.485 126.298 -3.520 1.00 58.11 P
ATOM 26 OP1 C B 238 81.017 126.074 -3.534 1.00 57.50 O
ATOM 27 OP2 C B 238 83.084 127.264 -4.480 1.00 56.10 O
ATOM 28 O5' C B 238 82.897 126.730 -2.040 1.00 58.12 O
TER
Atoms:
OP1: (92.215,124.834,-10.550)
OP2: (90.656,126.307,-9.127)
C3': (86.659,122.567,-8.694)
C1': (87.767,120.608,-9.465)
C5': (88.675,124.063,-9.190)
O4': (88.567,121.730,-9.778)
C8: (89.060,118.543,-8.782)
O2': (85.463,120.943,-10.092)
C6: (90.094,119.063,-5.467)
C5: (89.604,118.997,-6.780)
C4: (88.838,120.063,-7.222)
P: (91.150,124.961,-9.520)
C4': (87.779,122.936,-9.653)
C2': (86.383,121.104,-9.033)
C2: (89.025,121.108,-5.298)
N1: (89.783,120.155,-4.738)
N3: (88.505,121.160,-6.521)
N6: (90.842,118.110,-4.906)
N7: (89.734,118.041,-7.776)
N9: (88.509,119.773,-8.524)
O5': (89.894,124.084,-9.968)
O3': (85.494,123.348,-8.940)
OP2: (90.656,126.307,-9.127)
C3': (86.659,122.567,-8.694)
C1': (87.767,120.608,-9.465)
C5': (88.675,124.063,-9.190)
O4': (88.567,121.730,-9.778)
C8: (89.060,118.543,-8.782)
O2': (85.463,120.943,-10.092)
C6: (90.094,119.063,-5.467)
C5: (89.604,118.997,-6.780)
C4: (88.838,120.063,-7.222)
P: (91.150,124.961,-9.520)
C4': (87.779,122.936,-9.653)
C2': (86.383,121.104,-9.033)
C2: (89.025,121.108,-5.298)
N1: (89.783,120.155,-4.738)
N3: (88.505,121.160,-6.521)
N6: (90.842,118.110,-4.906)
N7: (89.734,118.041,-7.776)
N9: (88.509,119.773,-8.524)
O5': (89.894,124.084,-9.968)
O3': (85.494,123.348,-8.940)
OP1: (83.773,124.975,-8.209)
OP2: (86.214,125.731,-8.508)
C3': (84.597,124.773,-3.873)
C1': (86.651,124.093,-2.925)
C5': (84.851,123.254,-5.919)
O6: (90.987,128.232,-3.074)
O4': (86.383,123.266,-4.043)
C8: (88.237,125.272,-4.527)
C2: (88.987,126.798,-0.506)
C6: (90.129,127.502,-2.559)
C5: (89.281,126.553,-3.186)
C4: (88.393,125.843,-2.408)
P: (85.230,124.693,-8.100)
C4': (84.990,123.415,-4.427)
C2': (85.345,124.800,-2.550)
O2': (84.690,124.057,-1.545)
N1: (89.905,127.557,-1.188)
N2: (88.916,126.990,0.814)
N3: (88.195,125.915,-1.077)
N7: (89.173,126.182,-4.519)
N9: (87.717,125.024,-3.279)
O5': (85.569,124.299,-6.594)
O3': (83.186,124.861,-3.704)
OP2: (86.214,125.731,-8.508)
C3': (84.597,124.773,-3.873)
C1': (86.651,124.093,-2.925)
C5': (84.851,123.254,-5.919)
O6: (90.987,128.232,-3.074)
O4': (86.383,123.266,-4.043)
C8: (88.237,125.272,-4.527)
C2: (88.987,126.798,-0.506)
C6: (90.129,127.502,-2.559)
C5: (89.281,126.553,-3.186)
C4: (88.393,125.843,-2.408)
P: (85.230,124.693,-8.100)
C4': (84.990,123.415,-4.427)
C2': (85.345,124.800,-2.550)
O2': (84.690,124.057,-1.545)
N1: (89.905,127.557,-1.188)
N2: (88.916,126.990,0.814)
N3: (88.195,125.915,-1.077)
N7: (89.173,126.182,-4.519)
N9: (87.717,125.024,-3.279)
O5': (85.569,124.299,-6.594)
O3': (83.186,124.861,-3.704)
Image (generated by PyMOL):