Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:B20:B24
Extra
PDB:
ATOM 1 O3' U A 19 -9.649 6.807 -22.658 1.00 22.25 O
ATOM 2 P A A 20 -9.681 8.250 -23.353 1.00 24.97 P
ATOM 3 OP1 A A 20 -11.033 8.834 -23.193 1.00 25.62 O
ATOM 4 OP2 A A 20 -9.111 8.090 -24.709 1.00 25.42 O
ATOM 5 O5' A A 20 -8.616 9.069 -22.480 1.00 25.63 O
ATOM 6 C5' A A 20 -9.040 10.023 -21.511 1.00 26.86 C
ATOM 7 C4' A A 20 -8.256 9.923 -20.214 1.00 26.32 C
ATOM 8 O4' A A 20 -8.297 8.576 -19.685 1.00 23.93 O
ATOM 9 C3' A A 20 -6.762 10.190 -20.290 1.00 27.11 C
ATOM 10 O3' A A 20 -6.484 11.573 -20.442 1.00 29.78 O
ATOM 11 C2' A A 20 -6.344 9.686 -18.916 1.00 26.12 C
ATOM 12 O2' A A 20 -6.650 10.620 -17.895 1.00 27.02 O
ATOM 13 C1' A A 20 -7.208 8.427 -18.787 1.00 23.39 C
ATOM 14 N9 A A 20 -6.483 7.202 -19.121 1.00 22.14 N
ATOM 15 C8 A A 20 -6.654 6.422 -20.228 1.00 21.43 C
ATOM 16 N7 A A 20 -5.860 5.382 -20.266 1.00 21.10 N
ATOM 17 C5 A A 20 -5.112 5.482 -19.109 1.00 21.43 C
ATOM 18 C6 A A 20 -4.084 4.677 -18.561 1.00 21.66 C
ATOM 19 N6 A A 20 -3.624 3.568 -19.149 1.00 21.21 N
ATOM 20 N1 A A 20 -3.550 5.057 -17.377 1.00 23.10 N
ATOM 21 C2 A A 20 -4.016 6.168 -16.789 1.00 22.80 C
ATOM 22 N3 A A 20 -4.970 7.002 -17.209 1.00 23.01 N
ATOM 23 C4 A A 20 -5.485 6.598 -18.385 1.00 21.72 C
ATOM 24 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 25 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 26 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 27 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
TER
ATOM 1 O3' G B 23 -4.980 9.928 -12.687 1.00 29.63 O
ATOM 2 P G B 24 -4.470 9.285 -11.318 1.00 29.14 P
ATOM 3 OP1 G B 24 -5.633 9.176 -10.412 1.00 29.00 O
ATOM 4 OP2 G B 24 -3.263 10.019 -10.884 1.00 31.56 O
ATOM 5 O5' G B 24 -4.005 7.820 -11.764 1.00 27.52 O
ATOM 6 C5' G B 24 -4.954 6.904 -12.303 1.00 25.82 C
ATOM 7 C4' G B 24 -4.302 5.599 -12.700 1.00 25.38 C
ATOM 8 O4' G B 24 -3.249 5.844 -13.658 1.00 26.58 O
ATOM 9 C3' G B 24 -3.610 4.851 -11.577 1.00 25.63 C
ATOM 10 O3' G B 24 -4.571 4.127 -10.815 1.00 24.59 O
ATOM 11 C2' G B 24 -2.673 3.937 -12.360 1.00 26.09 C
ATOM 12 O2' G B 24 -3.291 2.753 -12.829 1.00 24.56 O
ATOM 13 C1' G B 24 -2.272 4.824 -13.541 1.00 26.72 C
ATOM 14 N9 G B 24 -0.954 5.428 -13.359 1.00 28.63 N
ATOM 15 C8 G B 24 -0.680 6.724 -12.996 1.00 30.22 C
ATOM 16 N7 G B 24 0.593 6.974 -12.899 1.00 32.42 N
ATOM 17 C5 G B 24 1.208 5.768 -13.210 1.00 32.02 C
ATOM 18 C6 G B 24 2.586 5.431 -13.266 1.00 34.75 C
ATOM 19 O6 G B 24 3.560 6.163 -13.046 1.00 37.62 O
ATOM 20 N1 G B 24 2.786 4.095 -13.618 1.00 34.61 N
ATOM 21 C2 G B 24 1.780 3.196 -13.884 1.00 31.72 C
ATOM 22 N2 G B 24 2.166 1.953 -14.209 1.00 32.72 N
ATOM 23 N3 G B 24 0.481 3.498 -13.833 1.00 29.46 N
ATOM 24 C4 G B 24 0.270 4.801 -13.493 1.00 30.05 C
ATOM 25 P G B 25 -4.545 4.145 -9.215 1.00 25.32 P
ATOM 26 OP1 G B 25 -3.416 4.998 -8.766 1.00 26.09 O
ATOM 27 OP2 G B 25 -4.652 2.737 -8.773 1.00 24.61 O
ATOM 28 O5' G B 25 -5.929 4.844 -8.818 1.00 25.81 O
TER
ATOM 2 P A A 20 -9.681 8.250 -23.353 1.00 24.97 P
ATOM 3 OP1 A A 20 -11.033 8.834 -23.193 1.00 25.62 O
ATOM 4 OP2 A A 20 -9.111 8.090 -24.709 1.00 25.42 O
ATOM 5 O5' A A 20 -8.616 9.069 -22.480 1.00 25.63 O
ATOM 6 C5' A A 20 -9.040 10.023 -21.511 1.00 26.86 C
ATOM 7 C4' A A 20 -8.256 9.923 -20.214 1.00 26.32 C
ATOM 8 O4' A A 20 -8.297 8.576 -19.685 1.00 23.93 O
ATOM 9 C3' A A 20 -6.762 10.190 -20.290 1.00 27.11 C
ATOM 10 O3' A A 20 -6.484 11.573 -20.442 1.00 29.78 O
ATOM 11 C2' A A 20 -6.344 9.686 -18.916 1.00 26.12 C
ATOM 12 O2' A A 20 -6.650 10.620 -17.895 1.00 27.02 O
ATOM 13 C1' A A 20 -7.208 8.427 -18.787 1.00 23.39 C
ATOM 14 N9 A A 20 -6.483 7.202 -19.121 1.00 22.14 N
ATOM 15 C8 A A 20 -6.654 6.422 -20.228 1.00 21.43 C
ATOM 16 N7 A A 20 -5.860 5.382 -20.266 1.00 21.10 N
ATOM 17 C5 A A 20 -5.112 5.482 -19.109 1.00 21.43 C
ATOM 18 C6 A A 20 -4.084 4.677 -18.561 1.00 21.66 C
ATOM 19 N6 A A 20 -3.624 3.568 -19.149 1.00 21.21 N
ATOM 20 N1 A A 20 -3.550 5.057 -17.377 1.00 23.10 N
ATOM 21 C2 A A 20 -4.016 6.168 -16.789 1.00 22.80 C
ATOM 22 N3 A A 20 -4.970 7.002 -17.209 1.00 23.01 N
ATOM 23 C4 A A 20 -5.485 6.598 -18.385 1.00 21.72 C
ATOM 24 P A A 21 -5.153 12.063 -21.186 1.00 32.02 P
ATOM 25 OP1 A A 21 -5.258 13.531 -21.373 1.00 34.98 O
ATOM 26 OP2 A A 21 -4.934 11.192 -22.362 1.00 31.05 O
ATOM 27 O5' A A 21 -4.002 11.739 -20.120 1.00 32.61 O
TER
ATOM 1 O3' G B 23 -4.980 9.928 -12.687 1.00 29.63 O
ATOM 2 P G B 24 -4.470 9.285 -11.318 1.00 29.14 P
ATOM 3 OP1 G B 24 -5.633 9.176 -10.412 1.00 29.00 O
ATOM 4 OP2 G B 24 -3.263 10.019 -10.884 1.00 31.56 O
ATOM 5 O5' G B 24 -4.005 7.820 -11.764 1.00 27.52 O
ATOM 6 C5' G B 24 -4.954 6.904 -12.303 1.00 25.82 C
ATOM 7 C4' G B 24 -4.302 5.599 -12.700 1.00 25.38 C
ATOM 8 O4' G B 24 -3.249 5.844 -13.658 1.00 26.58 O
ATOM 9 C3' G B 24 -3.610 4.851 -11.577 1.00 25.63 C
ATOM 10 O3' G B 24 -4.571 4.127 -10.815 1.00 24.59 O
ATOM 11 C2' G B 24 -2.673 3.937 -12.360 1.00 26.09 C
ATOM 12 O2' G B 24 -3.291 2.753 -12.829 1.00 24.56 O
ATOM 13 C1' G B 24 -2.272 4.824 -13.541 1.00 26.72 C
ATOM 14 N9 G B 24 -0.954 5.428 -13.359 1.00 28.63 N
ATOM 15 C8 G B 24 -0.680 6.724 -12.996 1.00 30.22 C
ATOM 16 N7 G B 24 0.593 6.974 -12.899 1.00 32.42 N
ATOM 17 C5 G B 24 1.208 5.768 -13.210 1.00 32.02 C
ATOM 18 C6 G B 24 2.586 5.431 -13.266 1.00 34.75 C
ATOM 19 O6 G B 24 3.560 6.163 -13.046 1.00 37.62 O
ATOM 20 N1 G B 24 2.786 4.095 -13.618 1.00 34.61 N
ATOM 21 C2 G B 24 1.780 3.196 -13.884 1.00 31.72 C
ATOM 22 N2 G B 24 2.166 1.953 -14.209 1.00 32.72 N
ATOM 23 N3 G B 24 0.481 3.498 -13.833 1.00 29.46 N
ATOM 24 C4 G B 24 0.270 4.801 -13.493 1.00 30.05 C
ATOM 25 P G B 25 -4.545 4.145 -9.215 1.00 25.32 P
ATOM 26 OP1 G B 25 -3.416 4.998 -8.766 1.00 26.09 O
ATOM 27 OP2 G B 25 -4.652 2.737 -8.773 1.00 24.61 O
ATOM 28 O5' G B 25 -5.929 4.844 -8.818 1.00 25.81 O
TER
Atoms:
OP1: (-11.033,8.834,-23.193)
OP2: (-9.111,8.090,-24.709)
C3': (-6.762,10.190,-20.290)
C1': (-7.208,8.427,-18.787)
C5': (-9.040,10.023,-21.511)
O4': (-8.297,8.576,-19.685)
C8: (-6.654,6.422,-20.228)
O2': (-6.650,10.620,-17.895)
C6: (-4.084,4.677,-18.561)
C5: (-5.112,5.482,-19.109)
C4: (-5.485,6.598,-18.385)
P: (-9.681,8.250,-23.353)
C4': (-8.256,9.923,-20.214)
C2': (-6.344,9.686,-18.916)
C2: (-4.016,6.168,-16.789)
N1: (-3.550,5.057,-17.377)
N3: (-4.970,7.002,-17.209)
N6: (-3.624,3.568,-19.149)
N7: (-5.860,5.382,-20.266)
N9: (-6.483,7.202,-19.121)
O5': (-8.616,9.069,-22.480)
O3': (-6.484,11.573,-20.442)
OP2: (-9.111,8.090,-24.709)
C3': (-6.762,10.190,-20.290)
C1': (-7.208,8.427,-18.787)
C5': (-9.040,10.023,-21.511)
O4': (-8.297,8.576,-19.685)
C8: (-6.654,6.422,-20.228)
O2': (-6.650,10.620,-17.895)
C6: (-4.084,4.677,-18.561)
C5: (-5.112,5.482,-19.109)
C4: (-5.485,6.598,-18.385)
P: (-9.681,8.250,-23.353)
C4': (-8.256,9.923,-20.214)
C2': (-6.344,9.686,-18.916)
C2: (-4.016,6.168,-16.789)
N1: (-3.550,5.057,-17.377)
N3: (-4.970,7.002,-17.209)
N6: (-3.624,3.568,-19.149)
N7: (-5.860,5.382,-20.266)
N9: (-6.483,7.202,-19.121)
O5': (-8.616,9.069,-22.480)
O3': (-6.484,11.573,-20.442)
OP1: (-5.633,9.176,-10.412)
OP2: (-3.263,10.019,-10.884)
C3': (-3.610,4.851,-11.577)
C1': (-2.272,4.824,-13.541)
C5': (-4.954,6.904,-12.303)
O6: (3.560,6.163,-13.046)
O4': (-3.249,5.844,-13.658)
C8: (-0.680,6.724,-12.996)
C2: (1.780,3.196,-13.884)
C6: (2.586,5.431,-13.266)
C5: (1.208,5.768,-13.210)
C4: (0.270,4.801,-13.493)
P: (-4.470,9.285,-11.318)
C4': (-4.302,5.599,-12.700)
C2': (-2.673,3.937,-12.360)
O2': (-3.291,2.753,-12.829)
N1: (2.786,4.095,-13.618)
N2: (2.166,1.953,-14.209)
N3: (0.481,3.498,-13.833)
N7: (0.593,6.974,-12.899)
N9: (-0.954,5.428,-13.359)
O5': (-4.005,7.820,-11.764)
O3': (-4.571,4.127,-10.815)
OP2: (-3.263,10.019,-10.884)
C3': (-3.610,4.851,-11.577)
C1': (-2.272,4.824,-13.541)
C5': (-4.954,6.904,-12.303)
O6: (3.560,6.163,-13.046)
O4': (-3.249,5.844,-13.658)
C8: (-0.680,6.724,-12.996)
C2: (1.780,3.196,-13.884)
C6: (2.586,5.431,-13.266)
C5: (1.208,5.768,-13.210)
C4: (0.270,4.801,-13.493)
P: (-4.470,9.285,-11.318)
C4': (-4.302,5.599,-12.700)
C2': (-2.673,3.937,-12.360)
O2': (-3.291,2.753,-12.829)
N1: (2.786,4.095,-13.618)
N2: (2.166,1.953,-14.209)
N3: (0.481,3.498,-13.833)
N7: (0.593,6.974,-12.899)
N9: (-0.954,5.428,-13.359)
O5': (-4.005,7.820,-11.764)
O3': (-4.571,4.127,-10.815)
Image (generated by PyMOL):