ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:937:942

Extra

PDB:
ATOM 1 O3' C A 36 82.487 21.477 81.884 1.00 62.33 O
ATOM 2 P A A 37 83.988 22.000 82.125 1.00 63.34 P
ATOM 3 OP1 A A 37 84.057 23.395 81.623 1.00 64.58 O
ATOM 4 OP2 A A 37 84.944 20.980 81.607 1.00 63.52 O
ATOM 5 O5' A A 37 84.111 22.057 83.707 1.00 61.57 O
ATOM 6 C5' A A 37 83.278 22.943 84.459 1.00 62.79 C
ATOM 7 C4' A A 37 83.479 22.723 85.932 1.00 64.17 C
ATOM 8 O4' A A 37 83.096 21.366 86.272 1.00 64.72 O
ATOM 9 C3' A A 37 84.910 22.819 86.427 1.00 64.91 C
ATOM 10 O3' A A 37 85.323 24.162 86.607 1.00 66.73 O
ATOM 11 C2' A A 37 84.829 22.052 87.737 1.00 63.97 C
ATOM 12 O2' A A 37 84.179 22.788 88.755 1.00 63.38 O
ATOM 13 C1' A A 37 83.912 20.899 87.336 1.00 63.16 C
ATOM 14 N9 A A 37 84.637 19.708 86.891 1.00 61.02 N
ATOM 15 C8 A A 37 84.874 19.265 85.610 1.00 60.61 C
ATOM 16 N7 A A 37 85.532 18.131 85.557 1.00 59.46 N
ATOM 17 C5 A A 37 85.751 17.811 86.890 1.00 58.93 C
ATOM 18 C6 A A 37 86.392 16.723 87.512 1.00 58.29 C
ATOM 19 N6 A A 37 86.951 15.710 86.844 1.00 56.55 N
ATOM 20 N1 A A 37 86.436 16.709 88.862 1.00 58.26 N
ATOM 21 C2 A A 37 85.868 17.720 89.534 1.00 59.51 C
ATOM 22 N3 A A 37 85.236 18.792 89.066 1.00 59.16 N
ATOM 23 C4 A A 37 85.212 18.777 87.721 1.00 59.40 C
ATOM 24 P U A 38 86.864 24.558 86.378 1.00 70.11 P
ATOM 25 OP1 U A 38 86.893 25.711 85.443 1.00 71.73 O
ATOM 26 OP2 U A 38 87.659 23.340 86.067 1.00 69.98 O
ATOM 27 O5' U A 38 87.336 25.090 87.796 1.00 70.05 O
TER

ATOM 1 O3' C B 41 89.891 17.330 95.054 1.00 70.14 O
ATOM 2 P G B 42 89.146 16.660 93.813 1.00 71.57 P
ATOM 3 OP1 G B 42 89.220 15.184 93.960 1.00 72.52 O
ATOM 4 OP2 G B 42 89.637 17.288 92.559 1.00 70.69 O
ATOM 5 O5' G B 42 87.659 17.155 94.084 1.00 71.69 O
ATOM 6 C5' G B 42 86.625 16.926 93.146 1.00 70.66 C
ATOM 7 C4' G B 42 85.300 16.858 93.854 1.00 69.11 C
ATOM 8 O4' G B 42 84.311 16.431 92.894 1.00 69.19 O
ATOM 9 C3' G B 42 85.199 15.832 94.974 1.00 68.12 C
ATOM 10 O3' G B 42 84.090 16.182 95.798 1.00 67.63 O
ATOM 11 C2' G B 42 84.945 14.546 94.197 1.00 68.59 C
ATOM 12 O2' G B 42 84.252 13.581 94.961 1.00 69.98 O
ATOM 13 C1' G B 42 84.083 15.045 93.033 1.00 68.49 C
ATOM 14 N9 G B 42 84.365 14.431 91.739 1.00 67.70 N
ATOM 15 C8 G B 42 85.073 13.282 91.486 1.00 68.08 C
ATOM 16 N7 G B 42 85.103 12.969 90.219 1.00 68.23 N
ATOM 17 C5 G B 42 84.378 13.976 89.598 1.00 67.51 C
ATOM 18 C6 G B 42 84.055 14.164 88.234 1.00 66.81 C
ATOM 19 O6 G B 42 84.344 13.446 87.270 1.00 67.18 O
ATOM 20 N1 G B 42 83.313 15.323 88.040 1.00 66.98 N
ATOM 21 C2 G B 42 82.929 16.191 89.034 1.00 68.42 C
ATOM 22 N2 G B 42 82.221 17.263 88.652 1.00 68.33 N
ATOM 23 N3 G B 42 83.217 16.021 90.310 1.00 68.27 N
ATOM 24 C4 G B 42 83.936 14.898 90.519 1.00 68.03 C
ATOM 25 P A B 43 84.092 15.823 97.368 1.00 68.61 P
ATOM 26 OP1 A B 43 85.420 15.309 97.796 1.00 70.47 O
ATOM 27 OP2 A B 43 82.883 15.004 97.611 1.00 68.80 O
ATOM 28 O5' A B 43 83.868 17.234 98.072 1.00 66.98 O
TER

Atoms:
OP1: (84.057,23.395,81.623)
OP2: (84.944,20.980,81.607)
C3': (84.910,22.819,86.427)
C1': (83.912,20.899,87.336)
C5': (83.278,22.943,84.459)
O4': (83.096,21.366,86.272)
C8: (84.874,19.265,85.610)
O2': (84.179,22.788,88.755)
C6: (86.392,16.723,87.512)
C5: (85.751,17.811,86.890)
C4: (85.212,18.777,87.721)
P: (83.988,22.000,82.125)
C4': (83.479,22.723,85.932)
C2': (84.829,22.052,87.737)
C2: (85.868,17.720,89.534)
N1: (86.436,16.709,88.862)
N3: (85.236,18.792,89.066)
N6: (86.951,15.710,86.844)
N7: (85.532,18.131,85.557)
N9: (84.637,19.708,86.891)
O5': (84.111,22.057,83.707)
O3': (85.323,24.162,86.607)
OP1: (89.220,15.184,93.960)
OP2: (89.637,17.288,92.559)
C3': (85.199,15.832,94.974)
C1': (84.083,15.045,93.033)
C5': (86.625,16.926,93.146)
O6: (84.344,13.446,87.270)
O4': (84.311,16.431,92.894)
C8: (85.073,13.282,91.486)
C2: (82.929,16.191,89.034)
C6: (84.055,14.164,88.234)
C5: (84.378,13.976,89.598)
C4: (83.936,14.898,90.519)
P: (89.146,16.660,93.813)
C4': (85.300,16.858,93.854)
C2': (84.945,14.546,94.197)
O2': (84.252,13.581,94.961)
N1: (83.313,15.323,88.040)
N2: (82.221,17.263,88.652)
N3: (83.217,16.021,90.310)
N7: (85.103,12.969,90.219)
N9: (84.365,14.431,91.739)
O5': (87.659,17.155,94.084)
O3': (84.090,16.182,95.798)
Image (generated by PyMOL):
PyMOL image
show in jmol