Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0165:0758
Extra
PDB:
ATOM 1 O3' U A 164 66.929 115.457 47.631 1.00 43.09 O
ATOM 2 P A A 165 67.276 117.002 47.339 1.00 45.75 P
ATOM 3 OP1 A A 165 65.987 117.671 46.989 1.00 43.45 O
ATOM 4 OP2 A A 165 68.419 117.069 46.385 1.00 45.28 O
ATOM 5 O5' A A 165 67.785 117.544 48.751 1.00 42.03 O
ATOM 6 C5' A A 165 66.860 117.795 49.821 1.00 40.81 C
ATOM 7 C4' A A 165 67.529 118.586 50.920 1.00 40.39 C
ATOM 8 O4' A A 165 68.521 117.765 51.589 1.00 39.42 O
ATOM 9 C3' A A 165 68.295 119.814 50.469 1.00 39.28 C
ATOM 10 O3' A A 165 67.425 120.922 50.272 1.00 38.49 O
ATOM 11 C2' A A 165 69.277 120.016 51.615 1.00 40.17 C
ATOM 12 O2' A A 165 68.695 120.656 52.733 1.00 40.25 O
ATOM 13 C1' A A 165 69.615 118.568 51.982 1.00 38.26 C
ATOM 14 N9 A A 165 70.816 118.032 51.342 1.00 37.71 N
ATOM 15 C8 A A 165 70.913 117.276 50.200 1.00 37.41 C
ATOM 16 N7 A A 165 72.134 116.902 49.916 1.00 37.21 N
ATOM 17 C5 A A 165 72.895 117.458 50.931 1.00 39.74 C
ATOM 18 C6 A A 165 74.272 117.420 51.213 1.00 41.90 C
ATOM 19 N6 A A 165 75.163 116.747 50.484 1.00 43.98 N
ATOM 20 N1 A A 165 74.709 118.099 52.295 1.00 42.48 N
ATOM 21 C2 A A 165 73.812 118.753 53.045 1.00 41.96 C
ATOM 22 N3 A A 165 72.494 118.847 52.894 1.00 40.14 N
ATOM 23 C4 A A 165 72.096 118.171 51.806 1.00 38.95 C
ATOM 24 P U A 166 67.772 122.012 49.151 1.00 38.42 P
ATOM 25 OP1 U A 166 66.883 123.164 49.421 1.00 37.54 O
ATOM 26 OP2 U A 166 67.776 121.401 47.809 1.00 39.34 O
ATOM 27 O5' U A 166 69.282 122.390 49.472 1.00 38.88 O
TER
ATOM 1 O3' C B 757 78.507 118.703 58.502 1.00 34.66 O
ATOM 2 P G B 758 79.086 120.070 57.917 1.00 36.39 P
ATOM 3 OP1 G B 758 80.338 119.718 57.218 1.00 38.47 O
ATOM 4 OP2 G B 758 79.088 121.083 58.995 1.00 36.21 O
ATOM 5 O5' G B 758 78.018 120.569 56.849 1.00 36.71 O
ATOM 6 C5' G B 758 77.858 119.919 55.584 1.00 35.73 C
ATOM 7 C4' G B 758 76.903 120.711 54.725 1.00 37.99 C
ATOM 8 O4' G B 758 75.623 120.838 55.396 1.00 38.25 O
ATOM 9 C3' G B 758 77.322 122.143 54.484 1.00 39.44 C
ATOM 10 O3' G B 758 78.245 122.208 53.415 1.00 42.83 O
ATOM 11 C2' G B 758 76.000 122.822 54.163 1.00 39.39 C
ATOM 12 O2' G B 758 75.561 122.554 52.847 1.00 41.29 O
ATOM 13 C1' G B 758 75.067 122.118 55.143 1.00 37.75 C
ATOM 14 N9 G B 758 74.901 122.797 56.428 1.00 37.14 N
ATOM 15 C8 G B 758 75.549 122.500 57.603 1.00 37.11 C
ATOM 16 N7 G B 758 75.144 123.225 58.610 1.00 37.77 N
ATOM 17 C5 G B 758 74.179 124.059 58.067 1.00 35.87 C
ATOM 18 C6 G B 758 73.371 125.051 58.685 1.00 36.69 C
ATOM 19 O6 G B 758 73.306 125.373 59.883 1.00 32.73 O
ATOM 20 N1 G B 758 72.562 125.687 57.757 1.00 38.81 N
ATOM 21 C2 G B 758 72.516 125.396 56.417 1.00 37.24 C
ATOM 22 N2 G B 758 71.681 126.150 55.691 1.00 39.82 N
ATOM 23 N3 G B 758 73.233 124.450 55.839 1.00 33.29 N
ATOM 24 C4 G B 758 74.039 123.830 56.714 1.00 34.73 C
ATOM 25 P G B 759 79.290 123.413 53.351 1.00 43.78 P
ATOM 26 OP1 G B 759 80.203 123.130 52.210 1.00 45.42 O
ATOM 27 OP2 G B 759 79.849 123.612 54.710 1.00 44.25 O
ATOM 28 O5' G B 759 78.384 124.674 53.003 1.00 42.08 O
TER
ATOM 2 P A A 165 67.276 117.002 47.339 1.00 45.75 P
ATOM 3 OP1 A A 165 65.987 117.671 46.989 1.00 43.45 O
ATOM 4 OP2 A A 165 68.419 117.069 46.385 1.00 45.28 O
ATOM 5 O5' A A 165 67.785 117.544 48.751 1.00 42.03 O
ATOM 6 C5' A A 165 66.860 117.795 49.821 1.00 40.81 C
ATOM 7 C4' A A 165 67.529 118.586 50.920 1.00 40.39 C
ATOM 8 O4' A A 165 68.521 117.765 51.589 1.00 39.42 O
ATOM 9 C3' A A 165 68.295 119.814 50.469 1.00 39.28 C
ATOM 10 O3' A A 165 67.425 120.922 50.272 1.00 38.49 O
ATOM 11 C2' A A 165 69.277 120.016 51.615 1.00 40.17 C
ATOM 12 O2' A A 165 68.695 120.656 52.733 1.00 40.25 O
ATOM 13 C1' A A 165 69.615 118.568 51.982 1.00 38.26 C
ATOM 14 N9 A A 165 70.816 118.032 51.342 1.00 37.71 N
ATOM 15 C8 A A 165 70.913 117.276 50.200 1.00 37.41 C
ATOM 16 N7 A A 165 72.134 116.902 49.916 1.00 37.21 N
ATOM 17 C5 A A 165 72.895 117.458 50.931 1.00 39.74 C
ATOM 18 C6 A A 165 74.272 117.420 51.213 1.00 41.90 C
ATOM 19 N6 A A 165 75.163 116.747 50.484 1.00 43.98 N
ATOM 20 N1 A A 165 74.709 118.099 52.295 1.00 42.48 N
ATOM 21 C2 A A 165 73.812 118.753 53.045 1.00 41.96 C
ATOM 22 N3 A A 165 72.494 118.847 52.894 1.00 40.14 N
ATOM 23 C4 A A 165 72.096 118.171 51.806 1.00 38.95 C
ATOM 24 P U A 166 67.772 122.012 49.151 1.00 38.42 P
ATOM 25 OP1 U A 166 66.883 123.164 49.421 1.00 37.54 O
ATOM 26 OP2 U A 166 67.776 121.401 47.809 1.00 39.34 O
ATOM 27 O5' U A 166 69.282 122.390 49.472 1.00 38.88 O
TER
ATOM 1 O3' C B 757 78.507 118.703 58.502 1.00 34.66 O
ATOM 2 P G B 758 79.086 120.070 57.917 1.00 36.39 P
ATOM 3 OP1 G B 758 80.338 119.718 57.218 1.00 38.47 O
ATOM 4 OP2 G B 758 79.088 121.083 58.995 1.00 36.21 O
ATOM 5 O5' G B 758 78.018 120.569 56.849 1.00 36.71 O
ATOM 6 C5' G B 758 77.858 119.919 55.584 1.00 35.73 C
ATOM 7 C4' G B 758 76.903 120.711 54.725 1.00 37.99 C
ATOM 8 O4' G B 758 75.623 120.838 55.396 1.00 38.25 O
ATOM 9 C3' G B 758 77.322 122.143 54.484 1.00 39.44 C
ATOM 10 O3' G B 758 78.245 122.208 53.415 1.00 42.83 O
ATOM 11 C2' G B 758 76.000 122.822 54.163 1.00 39.39 C
ATOM 12 O2' G B 758 75.561 122.554 52.847 1.00 41.29 O
ATOM 13 C1' G B 758 75.067 122.118 55.143 1.00 37.75 C
ATOM 14 N9 G B 758 74.901 122.797 56.428 1.00 37.14 N
ATOM 15 C8 G B 758 75.549 122.500 57.603 1.00 37.11 C
ATOM 16 N7 G B 758 75.144 123.225 58.610 1.00 37.77 N
ATOM 17 C5 G B 758 74.179 124.059 58.067 1.00 35.87 C
ATOM 18 C6 G B 758 73.371 125.051 58.685 1.00 36.69 C
ATOM 19 O6 G B 758 73.306 125.373 59.883 1.00 32.73 O
ATOM 20 N1 G B 758 72.562 125.687 57.757 1.00 38.81 N
ATOM 21 C2 G B 758 72.516 125.396 56.417 1.00 37.24 C
ATOM 22 N2 G B 758 71.681 126.150 55.691 1.00 39.82 N
ATOM 23 N3 G B 758 73.233 124.450 55.839 1.00 33.29 N
ATOM 24 C4 G B 758 74.039 123.830 56.714 1.00 34.73 C
ATOM 25 P G B 759 79.290 123.413 53.351 1.00 43.78 P
ATOM 26 OP1 G B 759 80.203 123.130 52.210 1.00 45.42 O
ATOM 27 OP2 G B 759 79.849 123.612 54.710 1.00 44.25 O
ATOM 28 O5' G B 759 78.384 124.674 53.003 1.00 42.08 O
TER
Atoms:
OP1: (65.987,117.671,46.989)
OP2: (68.419,117.069,46.385)
C3': (68.295,119.814,50.469)
C1': (69.615,118.568,51.982)
C5': (66.860,117.795,49.821)
O4': (68.521,117.765,51.589)
C8: (70.913,117.276,50.200)
O2': (68.695,120.656,52.733)
C6: (74.272,117.420,51.213)
C5: (72.895,117.458,50.931)
C4: (72.096,118.171,51.806)
P: (67.276,117.002,47.339)
C4': (67.529,118.586,50.920)
C2': (69.277,120.016,51.615)
C2: (73.812,118.753,53.045)
N1: (74.709,118.099,52.295)
N3: (72.494,118.847,52.894)
N6: (75.163,116.747,50.484)
N7: (72.134,116.902,49.916)
N9: (70.816,118.032,51.342)
O5': (67.785,117.544,48.751)
O3': (67.425,120.922,50.272)
OP2: (68.419,117.069,46.385)
C3': (68.295,119.814,50.469)
C1': (69.615,118.568,51.982)
C5': (66.860,117.795,49.821)
O4': (68.521,117.765,51.589)
C8: (70.913,117.276,50.200)
O2': (68.695,120.656,52.733)
C6: (74.272,117.420,51.213)
C5: (72.895,117.458,50.931)
C4: (72.096,118.171,51.806)
P: (67.276,117.002,47.339)
C4': (67.529,118.586,50.920)
C2': (69.277,120.016,51.615)
C2: (73.812,118.753,53.045)
N1: (74.709,118.099,52.295)
N3: (72.494,118.847,52.894)
N6: (75.163,116.747,50.484)
N7: (72.134,116.902,49.916)
N9: (70.816,118.032,51.342)
O5': (67.785,117.544,48.751)
O3': (67.425,120.922,50.272)
OP1: (80.338,119.718,57.218)
OP2: (79.088,121.083,58.995)
C3': (77.322,122.143,54.484)
C1': (75.067,122.118,55.143)
C5': (77.858,119.919,55.584)
O6: (73.306,125.373,59.883)
O4': (75.623,120.838,55.396)
C8: (75.549,122.500,57.603)
C2: (72.516,125.396,56.417)
C6: (73.371,125.051,58.685)
C5: (74.179,124.059,58.067)
C4: (74.039,123.830,56.714)
P: (79.086,120.070,57.917)
C4': (76.903,120.711,54.725)
C2': (76.000,122.822,54.163)
O2': (75.561,122.554,52.847)
N1: (72.562,125.687,57.757)
N2: (71.681,126.150,55.691)
N3: (73.233,124.450,55.839)
N7: (75.144,123.225,58.610)
N9: (74.901,122.797,56.428)
O5': (78.018,120.569,56.849)
O3': (78.245,122.208,53.415)
OP2: (79.088,121.083,58.995)
C3': (77.322,122.143,54.484)
C1': (75.067,122.118,55.143)
C5': (77.858,119.919,55.584)
O6: (73.306,125.373,59.883)
O4': (75.623,120.838,55.396)
C8: (75.549,122.500,57.603)
C2: (72.516,125.396,56.417)
C6: (73.371,125.051,58.685)
C5: (74.179,124.059,58.067)
C4: (74.039,123.830,56.714)
P: (79.086,120.070,57.917)
C4': (76.903,120.711,54.725)
C2': (76.000,122.822,54.163)
O2': (75.561,122.554,52.847)
N1: (72.562,125.687,57.757)
N2: (71.681,126.150,55.691)
N3: (73.233,124.450,55.839)
N7: (75.144,123.225,58.610)
N9: (74.901,122.797,56.428)
O5': (78.018,120.569,56.849)
O3': (78.245,122.208,53.415)
Image (generated by PyMOL):