ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A554:A1053

Extra

PDB:
ATOM 1 O3' A A 553 -0.947 91.139 97.674 1.00 44.23 O
ATOM 2 P A A 554 -0.997 90.585 99.172 1.00 45.73 P
ATOM 3 OP1 A A 554 -1.117 89.101 99.060 1.00 44.06 O
ATOM 4 OP2 A A 554 -2.008 91.359 99.926 1.00 46.06 O
ATOM 5 O5' A A 554 0.412 90.989 99.811 1.00 44.62 O
ATOM 6 C5' A A 554 1.642 90.330 99.434 1.00 41.24 C
ATOM 7 C4' A A 554 2.817 91.192 99.810 1.00 38.76 C
ATOM 8 O4' A A 554 2.618 92.526 99.269 1.00 40.64 O
ATOM 9 C3' A A 554 2.949 91.453 101.297 1.00 37.08 C
ATOM 10 O3' A A 554 3.599 90.387 101.953 1.00 35.75 O
ATOM 11 C2' A A 554 3.775 92.726 101.336 1.00 36.69 C
ATOM 12 O2' A A 554 5.145 92.487 101.107 1.00 35.43 O
ATOM 13 C1' A A 554 3.172 93.491 100.162 1.00 37.96 C
ATOM 14 N9 A A 554 2.107 94.392 100.594 1.00 37.11 N
ATOM 15 C8 A A 554 0.763 94.151 100.641 1.00 37.02 C
ATOM 16 N7 A A 554 0.059 95.174 101.057 1.00 38.03 N
ATOM 17 C5 A A 554 1.009 96.155 101.301 1.00 37.13 C
ATOM 18 C6 A A 554 0.901 97.480 101.747 1.00 36.93 C
ATOM 19 N6 A A 554 -0.263 98.074 102.022 1.00 37.24 N
ATOM 20 N1 A A 554 2.042 98.188 101.895 1.00 36.36 N
ATOM 21 C2 A A 554 3.203 97.593 101.608 1.00 36.21 C
ATOM 22 N3 A A 554 3.429 96.355 101.172 1.00 37.68 N
ATOM 23 C4 A A 554 2.274 95.683 101.034 1.00 37.10 C
ATOM 24 P U A 555 3.025 89.873 103.348 1.00 34.85 P
ATOM 25 OP1 U A 555 3.978 88.880 103.888 1.00 32.99 O
ATOM 26 OP2 U A 555 1.625 89.476 103.085 1.00 35.76 O
ATOM 27 O5' U A 555 3.027 91.173 104.272 1.00 30.46 O
TER

ATOM 1 O3' G B1052 3.989 102.738 102.678 1.00 39.18 O
ATOM 2 P G B1053 4.836 102.737 104.040 1.00 39.11 P
ATOM 3 OP1 G B1053 3.887 103.097 105.108 1.00 39.32 O
ATOM 4 OP2 G B1053 6.062 103.560 103.841 1.00 41.28 O
ATOM 5 O5' G B1053 5.269 101.213 104.217 1.00 38.23 O
ATOM 6 C5' G B1053 4.292 100.227 104.540 1.00 36.20 C
ATOM 7 C4' G B1053 4.862 98.832 104.428 1.00 36.42 C
ATOM 8 O4' G B1053 5.516 98.634 103.151 1.00 34.80 O
ATOM 9 C3' G B1053 5.934 98.399 105.408 1.00 34.66 C
ATOM 10 O3' G B1053 5.341 98.044 106.650 1.00 36.38 O
ATOM 11 C2' G B1053 6.417 97.125 104.737 1.00 34.28 C
ATOM 12 O2' G B1053 5.472 96.101 104.940 1.00 35.36 O
ATOM 13 C1' G B1053 6.386 97.520 103.258 1.00 34.62 C
ATOM 14 N9 G B1053 7.716 97.891 102.783 1.00 35.44 N
ATOM 15 C8 G B1053 8.172 99.146 102.472 1.00 34.57 C
ATOM 16 N7 G B1053 9.432 99.166 102.126 1.00 33.49 N
ATOM 17 C5 G B1053 9.831 97.840 102.202 1.00 34.97 C
ATOM 18 C6 G B1053 11.096 97.237 101.957 1.00 36.21 C
ATOM 19 O6 G B1053 12.157 97.772 101.616 1.00 36.91 O
ATOM 20 N1 G B1053 11.052 95.858 102.156 1.00 34.96 N
ATOM 21 C2 G B1053 9.943 95.150 102.537 1.00 34.95 C
ATOM 22 N2 G B1053 10.099 93.836 102.653 1.00 34.06 N
ATOM 23 N3 G B1053 8.762 95.698 102.780 1.00 36.19 N
ATOM 24 C4 G B1053 8.778 97.037 102.593 1.00 35.46 C
ATOM 25 P U B1054 6.200 98.101 108.006 1.00 36.20 P
ATOM 26 OP1 U B1054 5.235 97.727 109.074 1.00 36.48 O
ATOM 27 OP2 U B1054 6.871 99.412 108.068 1.00 35.94 O
ATOM 28 O5' U B1054 7.279 96.936 107.855 1.00 32.55 O
TER

Atoms:
OP1: (-1.117,89.101,99.060)
OP2: (-2.008,91.359,99.926)
C3': (2.949,91.453,101.297)
C1': (3.172,93.491,100.162)
C5': (1.642,90.330,99.434)
O4': (2.618,92.526,99.269)
C8: (0.763,94.151,100.641)
O2': (5.145,92.487,101.107)
C6: (0.901,97.480,101.747)
C5: (1.009,96.155,101.301)
C4: (2.274,95.683,101.034)
P: (-0.997,90.585,99.172)
C4': (2.817,91.192,99.810)
C2': (3.775,92.726,101.336)
C2: (3.203,97.593,101.608)
N1: (2.042,98.188,101.895)
N3: (3.429,96.355,101.172)
N6: (-0.263,98.074,102.022)
N7: (0.059,95.174,101.057)
N9: (2.107,94.392,100.594)
O5': (0.412,90.989,99.811)
O3': (3.599,90.387,101.953)
OP1: (3.887,103.097,105.108)
OP2: (6.062,103.560,103.841)
C3': (5.934,98.399,105.408)
C1': (6.386,97.520,103.258)
C5': (4.292,100.227,104.540)
O6: (12.157,97.772,101.616)
O4': (5.516,98.634,103.151)
C8: (8.172,99.146,102.472)
C2: (9.943,95.150,102.537)
C6: (11.096,97.237,101.957)
C5: (9.831,97.840,102.202)
C4: (8.778,97.037,102.593)
P: (4.836,102.737,104.040)
C4': (4.862,98.832,104.428)
C2': (6.417,97.125,104.737)
O2': (5.472,96.101,104.940)
N1: (11.052,95.858,102.156)
N2: (10.099,93.836,102.653)
N3: (8.762,95.698,102.780)
N7: (9.432,99.166,102.126)
N9: (7.716,97.891,102.783)
O5': (5.269,101.213,104.217)
O3': (5.341,98.044,106.650)
Image (generated by PyMOL):
PyMOL image
show in jmol