Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A50:A54
Extra
PDB:
ATOM 1 O3' A A 49 -18.716 50.716 4.857 1.00 43.07 O
ATOM 2 P A A 50 -19.038 52.228 4.450 1.00 43.40 P
ATOM 3 OP1 A A 50 -20.481 52.462 4.659 1.00 43.34 O
ATOM 4 OP2 A A 50 -18.449 52.517 3.125 1.00 43.42 O
ATOM 5 O5' A A 50 -18.198 53.052 5.529 1.00 43.52 O
ATOM 6 C5' A A 50 -18.592 53.072 6.902 1.00 43.36 C
ATOM 7 C4' A A 50 -17.540 53.788 7.722 1.00 42.98 C
ATOM 8 O4' A A 50 -16.255 53.162 7.486 1.00 43.05 O
ATOM 9 C3' A A 50 -17.296 55.231 7.322 1.00 42.73 C
ATOM 10 O3' A A 50 -18.266 56.096 7.883 1.00 42.86 O
ATOM 11 C2' A A 50 -15.897 55.472 7.876 1.00 42.72 C
ATOM 12 O2' A A 50 -15.879 55.783 9.256 1.00 42.92 O
ATOM 13 C1' A A 50 -15.225 54.126 7.601 1.00 42.46 C
ATOM 14 N9 A A 50 -14.442 54.170 6.368 1.00 42.24 N
ATOM 15 C8 A A 50 -14.866 53.901 5.093 1.00 42.18 C
ATOM 16 N7 A A 50 -13.933 54.046 4.180 1.00 42.21 N
ATOM 17 C5 A A 50 -12.819 54.448 4.901 1.00 42.22 C
ATOM 18 C6 A A 50 -11.491 54.775 4.525 1.00 42.18 C
ATOM 19 N6 A A 50 -11.041 54.735 3.266 1.00 41.75 N
ATOM 20 N1 A A 50 -10.627 55.137 5.503 1.00 42.44 N
ATOM 21 C2 A A 50 -11.063 55.174 6.775 1.00 42.44 C
ATOM 22 N3 A A 50 -12.280 54.889 7.246 1.00 42.05 N
ATOM 23 C4 A A 50 -13.119 54.531 6.254 1.00 42.19 C
ATOM 24 P U A 51 -18.904 57.228 6.949 1.00 43.40 P
ATOM 25 OP1 U A 51 -19.859 58.008 7.769 1.00 43.44 O
ATOM 26 OP2 U A 51 -19.367 56.600 5.692 1.00 43.16 O
ATOM 27 O5' U A 51 -17.638 58.135 6.598 1.00 43.58 O
TER
ATOM 1 O3' G B 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 2 P G B 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 3 OP1 G B 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 4 OP2 G B 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 5 O5' G B 54 -9.579 57.443 11.666 1.00 38.18 O
ATOM 6 C5' G B 54 -9.327 56.156 11.130 1.00 38.54 C
ATOM 7 C4' G B 54 -8.532 56.261 9.849 1.00 38.91 C
ATOM 8 O4' G B 54 -9.127 57.224 8.950 1.00 39.65 O
ATOM 9 C3' G B 54 -7.137 56.818 10.020 1.00 39.14 C
ATOM 10 O3' G B 54 -6.288 55.889 10.656 1.00 39.44 O
ATOM 11 C2' G B 54 -6.784 57.143 8.569 1.00 39.40 C
ATOM 12 O2' G B 54 -6.474 56.047 7.728 1.00 39.00 O
ATOM 13 C1' G B 54 -8.106 57.769 8.128 1.00 39.88 C
ATOM 14 N9 G B 54 -8.106 59.229 8.229 1.00 40.02 N
ATOM 15 C8 G B 54 -8.958 60.023 8.958 1.00 40.30 C
ATOM 16 N7 G B 54 -8.705 61.297 8.848 1.00 40.64 N
ATOM 17 C5 G B 54 -7.610 61.352 7.994 1.00 40.59 C
ATOM 18 C6 G B 54 -6.882 62.466 7.502 1.00 40.61 C
ATOM 19 O6 G B 54 -7.083 63.663 7.743 1.00 40.33 O
ATOM 20 N1 G B 54 -5.835 62.086 6.653 1.00 40.67 N
ATOM 21 C2 G B 54 -5.532 60.777 6.326 1.00 40.70 C
ATOM 22 N2 G B 54 -4.495 60.570 5.502 1.00 40.51 N
ATOM 23 N3 G B 54 -6.209 59.729 6.780 1.00 40.48 N
ATOM 24 C4 G B 54 -7.230 60.086 7.605 1.00 40.35 C
ATOM 25 P G B 55 -5.433 56.385 11.911 1.00 39.71 P
ATOM 26 OP1 G B 55 -5.259 55.237 12.820 1.00 40.02 O
ATOM 27 OP2 G B 55 -6.015 57.635 12.448 1.00 39.75 O
ATOM 28 O5' G B 55 -4.035 56.747 11.224 1.00 40.45 O
TER
ATOM 2 P A A 50 -19.038 52.228 4.450 1.00 43.40 P
ATOM 3 OP1 A A 50 -20.481 52.462 4.659 1.00 43.34 O
ATOM 4 OP2 A A 50 -18.449 52.517 3.125 1.00 43.42 O
ATOM 5 O5' A A 50 -18.198 53.052 5.529 1.00 43.52 O
ATOM 6 C5' A A 50 -18.592 53.072 6.902 1.00 43.36 C
ATOM 7 C4' A A 50 -17.540 53.788 7.722 1.00 42.98 C
ATOM 8 O4' A A 50 -16.255 53.162 7.486 1.00 43.05 O
ATOM 9 C3' A A 50 -17.296 55.231 7.322 1.00 42.73 C
ATOM 10 O3' A A 50 -18.266 56.096 7.883 1.00 42.86 O
ATOM 11 C2' A A 50 -15.897 55.472 7.876 1.00 42.72 C
ATOM 12 O2' A A 50 -15.879 55.783 9.256 1.00 42.92 O
ATOM 13 C1' A A 50 -15.225 54.126 7.601 1.00 42.46 C
ATOM 14 N9 A A 50 -14.442 54.170 6.368 1.00 42.24 N
ATOM 15 C8 A A 50 -14.866 53.901 5.093 1.00 42.18 C
ATOM 16 N7 A A 50 -13.933 54.046 4.180 1.00 42.21 N
ATOM 17 C5 A A 50 -12.819 54.448 4.901 1.00 42.22 C
ATOM 18 C6 A A 50 -11.491 54.775 4.525 1.00 42.18 C
ATOM 19 N6 A A 50 -11.041 54.735 3.266 1.00 41.75 N
ATOM 20 N1 A A 50 -10.627 55.137 5.503 1.00 42.44 N
ATOM 21 C2 A A 50 -11.063 55.174 6.775 1.00 42.44 C
ATOM 22 N3 A A 50 -12.280 54.889 7.246 1.00 42.05 N
ATOM 23 C4 A A 50 -13.119 54.531 6.254 1.00 42.19 C
ATOM 24 P U A 51 -18.904 57.228 6.949 1.00 43.40 P
ATOM 25 OP1 U A 51 -19.859 58.008 7.769 1.00 43.44 O
ATOM 26 OP2 U A 51 -19.367 56.600 5.692 1.00 43.16 O
ATOM 27 O5' U A 51 -17.638 58.135 6.598 1.00 43.58 O
TER
ATOM 1 O3' G B 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 2 P G B 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 3 OP1 G B 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 4 OP2 G B 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 5 O5' G B 54 -9.579 57.443 11.666 1.00 38.18 O
ATOM 6 C5' G B 54 -9.327 56.156 11.130 1.00 38.54 C
ATOM 7 C4' G B 54 -8.532 56.261 9.849 1.00 38.91 C
ATOM 8 O4' G B 54 -9.127 57.224 8.950 1.00 39.65 O
ATOM 9 C3' G B 54 -7.137 56.818 10.020 1.00 39.14 C
ATOM 10 O3' G B 54 -6.288 55.889 10.656 1.00 39.44 O
ATOM 11 C2' G B 54 -6.784 57.143 8.569 1.00 39.40 C
ATOM 12 O2' G B 54 -6.474 56.047 7.728 1.00 39.00 O
ATOM 13 C1' G B 54 -8.106 57.769 8.128 1.00 39.88 C
ATOM 14 N9 G B 54 -8.106 59.229 8.229 1.00 40.02 N
ATOM 15 C8 G B 54 -8.958 60.023 8.958 1.00 40.30 C
ATOM 16 N7 G B 54 -8.705 61.297 8.848 1.00 40.64 N
ATOM 17 C5 G B 54 -7.610 61.352 7.994 1.00 40.59 C
ATOM 18 C6 G B 54 -6.882 62.466 7.502 1.00 40.61 C
ATOM 19 O6 G B 54 -7.083 63.663 7.743 1.00 40.33 O
ATOM 20 N1 G B 54 -5.835 62.086 6.653 1.00 40.67 N
ATOM 21 C2 G B 54 -5.532 60.777 6.326 1.00 40.70 C
ATOM 22 N2 G B 54 -4.495 60.570 5.502 1.00 40.51 N
ATOM 23 N3 G B 54 -6.209 59.729 6.780 1.00 40.48 N
ATOM 24 C4 G B 54 -7.230 60.086 7.605 1.00 40.35 C
ATOM 25 P G B 55 -5.433 56.385 11.911 1.00 39.71 P
ATOM 26 OP1 G B 55 -5.259 55.237 12.820 1.00 40.02 O
ATOM 27 OP2 G B 55 -6.015 57.635 12.448 1.00 39.75 O
ATOM 28 O5' G B 55 -4.035 56.747 11.224 1.00 40.45 O
TER
Atoms:
OP1: (-20.481,52.462,4.659)
OP2: (-18.449,52.517,3.125)
C3': (-17.296,55.231,7.322)
C1': (-15.225,54.126,7.601)
C5': (-18.592,53.072,6.902)
O4': (-16.255,53.162,7.486)
C8: (-14.866,53.901,5.093)
O2': (-15.879,55.783,9.256)
C6: (-11.491,54.775,4.525)
C5: (-12.819,54.448,4.901)
C4: (-13.119,54.531,6.254)
P: (-19.038,52.228,4.450)
C4': (-17.540,53.788,7.722)
C2': (-15.897,55.472,7.876)
C2: (-11.063,55.174,6.775)
N1: (-10.627,55.137,5.503)
N3: (-12.280,54.889,7.246)
N6: (-11.041,54.735,3.266)
N7: (-13.933,54.046,4.180)
N9: (-14.442,54.170,6.368)
O5': (-18.198,53.052,5.529)
O3': (-18.266,56.096,7.883)
OP2: (-18.449,52.517,3.125)
C3': (-17.296,55.231,7.322)
C1': (-15.225,54.126,7.601)
C5': (-18.592,53.072,6.902)
O4': (-16.255,53.162,7.486)
C8: (-14.866,53.901,5.093)
O2': (-15.879,55.783,9.256)
C6: (-11.491,54.775,4.525)
C5: (-12.819,54.448,4.901)
C4: (-13.119,54.531,6.254)
P: (-19.038,52.228,4.450)
C4': (-17.540,53.788,7.722)
C2': (-15.897,55.472,7.876)
C2: (-11.063,55.174,6.775)
N1: (-10.627,55.137,5.503)
N3: (-12.280,54.889,7.246)
N6: (-11.041,54.735,3.266)
N7: (-13.933,54.046,4.180)
N9: (-14.442,54.170,6.368)
O5': (-18.198,53.052,5.529)
O3': (-18.266,56.096,7.883)
OP1: (-10.683,56.616,13.747)
OP2: (-10.827,59.076,13.061)
C3': (-7.137,56.818,10.020)
C1': (-8.106,57.769,8.128)
C5': (-9.327,56.156,11.130)
O6: (-7.083,63.663,7.743)
O4': (-9.127,57.224,8.950)
C8: (-8.958,60.023,8.958)
C2: (-5.532,60.777,6.326)
C6: (-6.882,62.466,7.502)
C5: (-7.610,61.352,7.994)
C4: (-7.230,60.086,7.605)
P: (-10.785,57.643,12.691)
C4': (-8.532,56.261,9.849)
C2': (-6.784,57.143,8.569)
O2': (-6.474,56.047,7.728)
N1: (-5.835,62.086,6.653)
N2: (-4.495,60.570,5.502)
N3: (-6.209,59.729,6.780)
N7: (-8.705,61.297,8.848)
N9: (-8.106,59.229,8.229)
O5': (-9.579,57.443,11.666)
O3': (-6.288,55.889,10.656)
OP2: (-10.827,59.076,13.061)
C3': (-7.137,56.818,10.020)
C1': (-8.106,57.769,8.128)
C5': (-9.327,56.156,11.130)
O6: (-7.083,63.663,7.743)
O4': (-9.127,57.224,8.950)
C8: (-8.958,60.023,8.958)
C2: (-5.532,60.777,6.326)
C6: (-6.882,62.466,7.502)
C5: (-7.610,61.352,7.994)
C4: (-7.230,60.086,7.605)
P: (-10.785,57.643,12.691)
C4': (-8.532,56.261,9.849)
C2': (-6.784,57.143,8.569)
O2': (-6.474,56.047,7.728)
N1: (-5.835,62.086,6.653)
N2: (-4.495,60.570,5.502)
N3: (-6.209,59.729,6.780)
N7: (-8.705,61.297,8.848)
N9: (-8.106,59.229,8.229)
O5': (-9.579,57.443,11.666)
O3': (-6.288,55.889,10.656)
Image (generated by PyMOL):