Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKW:A19:A23
Extra
PDB:
ATOM 1 O3' U A 18 -3.629 -8.243 5.055 1.00 42.96 O
ATOM 2 P A A 19 -4.118 -6.791 5.444 1.00 45.14 P
ATOM 3 OP1 A A 19 -5.593 -6.847 5.485 1.00 45.89 O
ATOM 4 OP2 A A 19 -3.457 -5.847 4.514 1.00 45.47 O
ATOM 5 O5' A A 19 -3.562 -6.581 6.917 1.00 38.05 O
ATOM 6 C5' A A 19 -3.975 -5.459 7.686 1.00 38.87 C
ATOM 7 C4' A A 19 -2.829 -4.864 8.460 1.00 46.36 C
ATOM 8 O4' A A 19 -1.605 -4.971 7.700 1.00 47.34 O
ATOM 9 C3' A A 19 -2.909 -3.379 8.781 1.00 50.81 C
ATOM 10 O3' A A 19 -3.795 -3.092 9.853 1.00 57.70 O
ATOM 11 C2' A A 19 -1.462 -3.067 9.110 1.00 48.63 C
ATOM 12 O2' A A 19 -1.159 -3.529 10.416 1.00 55.59 O
ATOM 13 C1' A A 19 -0.720 -3.958 8.117 1.00 44.85 C
ATOM 14 N9 A A 19 -0.247 -3.226 6.940 1.00 42.76 N
ATOM 15 C8 A A 19 -0.648 -3.347 5.640 1.00 46.33 C
ATOM 16 N7 A A 19 -0.004 -2.557 4.807 1.00 46.45 N
ATOM 17 C5 A A 19 0.903 -1.906 5.620 1.00 46.79 C
ATOM 18 C6 A A 19 1.889 -0.946 5.346 1.00 49.51 C
ATOM 19 N6 A A 19 2.158 -0.447 4.129 1.00 50.47 N
ATOM 20 N1 A A 19 2.598 -0.514 6.404 1.00 44.57 N
ATOM 21 C2 A A 19 2.332 -1.005 7.614 1.00 37.62 C
ATOM 22 N3 A A 19 1.443 -1.902 7.988 1.00 34.14 N
ATOM 23 C4 A A 19 0.764 -2.320 6.932 1.00 38.87 C
ATOM 24 P A A 20 -4.814 -1.843 9.765 1.00 57.28 P
ATOM 25 OP1 A A 20 -6.065 -2.248 10.450 1.00 59.20 O
ATOM 26 OP2 A A 20 -4.879 -1.428 8.332 1.00 47.95 O
ATOM 27 O5' A A 20 -4.075 -0.733 10.617 1.00 56.09 O
TER
ATOM 1 O3' G B 22 3.412 -1.655 12.886 1.00 48.96 O
ATOM 2 P G B 23 4.939 -1.389 13.308 1.00 70.77 P
ATOM 3 OP1 G B 23 5.517 -2.700 13.675 1.00 74.63 O
ATOM 4 OP2 G B 23 4.939 -0.297 14.324 1.00 65.06 O
ATOM 5 O5' G B 23 5.590 -0.880 11.948 1.00 37.54 O
ATOM 6 C5' G B 23 5.453 -1.646 10.766 1.00 33.20 C
ATOM 7 C4' G B 23 5.852 -0.872 9.543 1.00 34.01 C
ATOM 8 O4' G B 23 5.041 0.304 9.416 1.00 40.31 O
ATOM 9 C3' G B 23 7.253 -0.323 9.514 1.00 38.84 C
ATOM 10 O3' G B 23 8.213 -1.312 9.213 1.00 54.03 O
ATOM 11 C2' G B 23 7.156 0.755 8.448 1.00 39.13 C
ATOM 12 O2' G B 23 7.296 0.179 7.166 1.00 42.49 O
ATOM 13 C1' G B 23 5.711 1.230 8.600 1.00 39.34 C
ATOM 14 N9 G B 23 5.591 2.575 9.194 1.00 38.06 N
ATOM 15 C8 G B 23 5.096 2.847 10.434 1.00 39.89 C
ATOM 16 N7 G B 23 5.058 4.126 10.685 1.00 42.56 N
ATOM 17 C5 G B 23 5.517 4.731 9.533 1.00 38.95 C
ATOM 18 C6 G B 23 5.665 6.105 9.243 1.00 40.80 C
ATOM 19 O6 G B 23 5.414 7.058 10.000 1.00 38.03 O
ATOM 20 N1 G B 23 6.156 6.300 7.949 1.00 42.19 N
ATOM 21 C2 G B 23 6.443 5.277 7.069 1.00 46.32 C
ATOM 22 N2 G B 23 6.904 5.610 5.844 1.00 46.17 N
ATOM 23 N3 G B 23 6.300 3.996 7.362 1.00 45.28 N
ATOM 24 C4 G B 23 5.840 3.793 8.600 1.00 37.66 C
ATOM 25 P G B 24 9.509 -1.489 10.149 1.00 42.77 P
ATOM 26 OP1 G B 24 9.408 -0.485 11.208 1.00 33.29 O
ATOM 27 OP2 G B 24 10.687 -1.473 9.258 1.00 34.99 O
ATOM 28 O5' G B 24 9.298 -2.943 10.783 1.00 47.13 O
TER
ATOM 2 P A A 19 -4.118 -6.791 5.444 1.00 45.14 P
ATOM 3 OP1 A A 19 -5.593 -6.847 5.485 1.00 45.89 O
ATOM 4 OP2 A A 19 -3.457 -5.847 4.514 1.00 45.47 O
ATOM 5 O5' A A 19 -3.562 -6.581 6.917 1.00 38.05 O
ATOM 6 C5' A A 19 -3.975 -5.459 7.686 1.00 38.87 C
ATOM 7 C4' A A 19 -2.829 -4.864 8.460 1.00 46.36 C
ATOM 8 O4' A A 19 -1.605 -4.971 7.700 1.00 47.34 O
ATOM 9 C3' A A 19 -2.909 -3.379 8.781 1.00 50.81 C
ATOM 10 O3' A A 19 -3.795 -3.092 9.853 1.00 57.70 O
ATOM 11 C2' A A 19 -1.462 -3.067 9.110 1.00 48.63 C
ATOM 12 O2' A A 19 -1.159 -3.529 10.416 1.00 55.59 O
ATOM 13 C1' A A 19 -0.720 -3.958 8.117 1.00 44.85 C
ATOM 14 N9 A A 19 -0.247 -3.226 6.940 1.00 42.76 N
ATOM 15 C8 A A 19 -0.648 -3.347 5.640 1.00 46.33 C
ATOM 16 N7 A A 19 -0.004 -2.557 4.807 1.00 46.45 N
ATOM 17 C5 A A 19 0.903 -1.906 5.620 1.00 46.79 C
ATOM 18 C6 A A 19 1.889 -0.946 5.346 1.00 49.51 C
ATOM 19 N6 A A 19 2.158 -0.447 4.129 1.00 50.47 N
ATOM 20 N1 A A 19 2.598 -0.514 6.404 1.00 44.57 N
ATOM 21 C2 A A 19 2.332 -1.005 7.614 1.00 37.62 C
ATOM 22 N3 A A 19 1.443 -1.902 7.988 1.00 34.14 N
ATOM 23 C4 A A 19 0.764 -2.320 6.932 1.00 38.87 C
ATOM 24 P A A 20 -4.814 -1.843 9.765 1.00 57.28 P
ATOM 25 OP1 A A 20 -6.065 -2.248 10.450 1.00 59.20 O
ATOM 26 OP2 A A 20 -4.879 -1.428 8.332 1.00 47.95 O
ATOM 27 O5' A A 20 -4.075 -0.733 10.617 1.00 56.09 O
TER
ATOM 1 O3' G B 22 3.412 -1.655 12.886 1.00 48.96 O
ATOM 2 P G B 23 4.939 -1.389 13.308 1.00 70.77 P
ATOM 3 OP1 G B 23 5.517 -2.700 13.675 1.00 74.63 O
ATOM 4 OP2 G B 23 4.939 -0.297 14.324 1.00 65.06 O
ATOM 5 O5' G B 23 5.590 -0.880 11.948 1.00 37.54 O
ATOM 6 C5' G B 23 5.453 -1.646 10.766 1.00 33.20 C
ATOM 7 C4' G B 23 5.852 -0.872 9.543 1.00 34.01 C
ATOM 8 O4' G B 23 5.041 0.304 9.416 1.00 40.31 O
ATOM 9 C3' G B 23 7.253 -0.323 9.514 1.00 38.84 C
ATOM 10 O3' G B 23 8.213 -1.312 9.213 1.00 54.03 O
ATOM 11 C2' G B 23 7.156 0.755 8.448 1.00 39.13 C
ATOM 12 O2' G B 23 7.296 0.179 7.166 1.00 42.49 O
ATOM 13 C1' G B 23 5.711 1.230 8.600 1.00 39.34 C
ATOM 14 N9 G B 23 5.591 2.575 9.194 1.00 38.06 N
ATOM 15 C8 G B 23 5.096 2.847 10.434 1.00 39.89 C
ATOM 16 N7 G B 23 5.058 4.126 10.685 1.00 42.56 N
ATOM 17 C5 G B 23 5.517 4.731 9.533 1.00 38.95 C
ATOM 18 C6 G B 23 5.665 6.105 9.243 1.00 40.80 C
ATOM 19 O6 G B 23 5.414 7.058 10.000 1.00 38.03 O
ATOM 20 N1 G B 23 6.156 6.300 7.949 1.00 42.19 N
ATOM 21 C2 G B 23 6.443 5.277 7.069 1.00 46.32 C
ATOM 22 N2 G B 23 6.904 5.610 5.844 1.00 46.17 N
ATOM 23 N3 G B 23 6.300 3.996 7.362 1.00 45.28 N
ATOM 24 C4 G B 23 5.840 3.793 8.600 1.00 37.66 C
ATOM 25 P G B 24 9.509 -1.489 10.149 1.00 42.77 P
ATOM 26 OP1 G B 24 9.408 -0.485 11.208 1.00 33.29 O
ATOM 27 OP2 G B 24 10.687 -1.473 9.258 1.00 34.99 O
ATOM 28 O5' G B 24 9.298 -2.943 10.783 1.00 47.13 O
TER
Atoms:
OP1: (-5.593,-6.847,5.485)
OP2: (-3.457,-5.847,4.514)
C3': (-2.909,-3.379,8.781)
C1': (-0.720,-3.958,8.117)
C5': (-3.975,-5.459,7.686)
O4': (-1.605,-4.971,7.700)
C8: (-0.648,-3.347,5.640)
O2': (-1.159,-3.529,10.416)
C6: (1.889,-0.946,5.346)
C5: (0.903,-1.906,5.620)
C4: (0.764,-2.320,6.932)
P: (-4.118,-6.791,5.444)
C4': (-2.829,-4.864,8.460)
C2': (-1.462,-3.067,9.110)
C2: (2.332,-1.005,7.614)
N1: (2.598,-0.514,6.404)
N3: (1.443,-1.902,7.988)
N6: (2.158,-0.447,4.129)
N7: (-0.004,-2.557,4.807)
N9: (-0.247,-3.226,6.940)
O5': (-3.562,-6.581,6.917)
O3': (-3.795,-3.092,9.853)
OP2: (-3.457,-5.847,4.514)
C3': (-2.909,-3.379,8.781)
C1': (-0.720,-3.958,8.117)
C5': (-3.975,-5.459,7.686)
O4': (-1.605,-4.971,7.700)
C8: (-0.648,-3.347,5.640)
O2': (-1.159,-3.529,10.416)
C6: (1.889,-0.946,5.346)
C5: (0.903,-1.906,5.620)
C4: (0.764,-2.320,6.932)
P: (-4.118,-6.791,5.444)
C4': (-2.829,-4.864,8.460)
C2': (-1.462,-3.067,9.110)
C2: (2.332,-1.005,7.614)
N1: (2.598,-0.514,6.404)
N3: (1.443,-1.902,7.988)
N6: (2.158,-0.447,4.129)
N7: (-0.004,-2.557,4.807)
N9: (-0.247,-3.226,6.940)
O5': (-3.562,-6.581,6.917)
O3': (-3.795,-3.092,9.853)
OP1: (5.517,-2.700,13.675)
OP2: (4.939,-0.297,14.324)
C3': (7.253,-0.323,9.514)
C1': (5.711,1.230,8.600)
C5': (5.453,-1.646,10.766)
O6: (5.414,7.058,10.000)
O4': (5.041,0.304,9.416)
C8: (5.096,2.847,10.434)
C2: (6.443,5.277,7.069)
C6: (5.665,6.105,9.243)
C5: (5.517,4.731,9.533)
C4: (5.840,3.793,8.600)
P: (4.939,-1.389,13.308)
C4': (5.852,-0.872,9.543)
C2': (7.156,0.755,8.448)
O2': (7.296,0.179,7.166)
N1: (6.156,6.300,7.949)
N2: (6.904,5.610,5.844)
N3: (6.300,3.996,7.362)
N7: (5.058,4.126,10.685)
N9: (5.591,2.575,9.194)
O5': (5.590,-0.880,11.948)
O3': (8.213,-1.312,9.213)
OP2: (4.939,-0.297,14.324)
C3': (7.253,-0.323,9.514)
C1': (5.711,1.230,8.600)
C5': (5.453,-1.646,10.766)
O6: (5.414,7.058,10.000)
O4': (5.041,0.304,9.416)
C8: (5.096,2.847,10.434)
C2: (6.443,5.277,7.069)
C6: (5.665,6.105,9.243)
C5: (5.517,4.731,9.533)
C4: (5.840,3.793,8.600)
P: (4.939,-1.389,13.308)
C4': (5.852,-0.872,9.543)
C2': (7.156,0.755,8.448)
O2': (7.296,0.179,7.166)
N1: (6.156,6.300,7.949)
N2: (6.904,5.610,5.844)
N3: (6.300,3.996,7.362)
N7: (5.058,4.126,10.685)
N9: (5.591,2.575,9.194)
O5': (5.590,-0.880,11.948)
O3': (8.213,-1.312,9.213)
Image (generated by PyMOL):