Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0304:0324
Extra
PDB:
ATOM 1 O3' G A 303 7.901 151.457 48.442 1.00 54.46 O
ATOM 2 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 3 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 4 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 5 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
ATOM 6 C5' A A 304 8.548 150.509 45.628 1.00 49.15 C
ATOM 7 C4' A A 304 9.859 149.839 45.312 1.00 48.19 C
ATOM 8 O4' A A 304 10.625 149.695 46.536 1.00 47.59 O
ATOM 9 C3' A A 304 9.742 148.433 44.751 1.00 47.69 C
ATOM 10 O3' A A 304 9.607 148.501 43.327 1.00 49.11 O
ATOM 11 C2' A A 304 11.080 147.813 45.148 1.00 47.39 C
ATOM 12 O2' A A 304 12.125 148.177 44.272 1.00 47.44 O
ATOM 13 C1' A A 304 11.348 148.478 46.503 1.00 46.92 C
ATOM 14 N9 A A 304 10.986 147.686 47.681 1.00 46.30 N
ATOM 15 C8 A A 304 9.829 147.752 48.416 1.00 46.05 C
ATOM 16 N7 A A 304 9.802 146.930 49.436 1.00 45.97 N
ATOM 17 C5 A A 304 11.022 146.274 49.368 1.00 45.24 C
ATOM 18 C6 A A 304 11.607 145.279 50.171 1.00 44.49 C
ATOM 19 N6 A A 304 11.019 144.749 51.243 1.00 44.29 N
ATOM 20 N1 A A 304 12.837 144.842 49.830 1.00 43.89 N
ATOM 21 C2 A A 304 13.429 145.372 48.758 1.00 42.26 C
ATOM 22 N3 A A 304 12.985 146.308 47.930 1.00 44.03 N
ATOM 23 C4 A A 304 11.760 146.725 48.291 1.00 45.31 C
ATOM 24 P A A 305 8.282 147.946 42.598 1.00 48.62 P
ATOM 25 OP1 A A 305 8.372 148.385 41.183 1.00 48.09 O
ATOM 26 OP2 A A 305 7.094 148.327 43.411 1.00 48.48 O
ATOM 27 O5' A A 305 8.443 146.359 42.592 1.00 47.65 O
TER
ATOM 1 O3' U B 323 19.280 147.250 40.657 1.00 46.71 O
ATOM 2 P G B 324 18.128 147.757 41.655 1.00 47.05 P
ATOM 3 OP1 G B 324 16.824 147.170 41.260 1.00 46.64 O
ATOM 4 OP2 G B 324 18.268 149.229 41.749 1.00 48.95 O
ATOM 5 O5' G B 324 18.586 147.187 43.067 1.00 49.69 O
ATOM 6 C5' G B 324 17.924 146.076 43.651 1.00 46.36 C
ATOM 7 C4' G B 324 17.465 146.425 45.039 1.00 44.84 C
ATOM 8 O4' G B 324 17.153 147.843 45.148 1.00 43.74 O
ATOM 9 C3' G B 324 16.198 145.683 45.423 1.00 45.66 C
ATOM 10 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 11 C2' G B 324 15.123 146.693 45.029 1.00 44.14 C
ATOM 12 O2' G B 324 13.890 146.503 45.673 1.00 46.30 O
ATOM 13 C1' G B 324 15.782 148.001 45.459 1.00 44.62 C
ATOM 14 N9 G B 324 15.288 149.199 44.785 1.00 45.57 N
ATOM 15 C8 G B 324 15.477 149.547 43.468 1.00 44.89 C
ATOM 16 N7 G B 324 14.957 150.707 43.163 1.00 45.30 N
ATOM 17 C5 G B 324 14.380 151.150 44.347 1.00 44.53 C
ATOM 18 C6 G B 324 13.683 152.360 44.638 1.00 44.52 C
ATOM 19 O6 G B 324 13.429 153.310 43.884 1.00 44.38 O
ATOM 20 N1 G B 324 13.273 152.406 45.963 1.00 43.10 N
ATOM 21 C2 G B 324 13.501 151.425 46.891 1.00 45.38 C
ATOM 22 N2 G B 324 13.033 151.666 48.121 1.00 45.79 N
ATOM 23 N3 G B 324 14.146 150.294 46.636 1.00 45.62 N
ATOM 24 C4 G B 324 14.559 150.226 45.354 1.00 45.06 C
ATOM 25 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 26 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 27 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 28 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
TER
ATOM 2 P A A 304 6.904 150.463 47.677 1.00 54.78 P
ATOM 3 OP1 A A 304 5.922 151.314 46.965 1.00 56.51 O
ATOM 4 OP2 A A 304 6.423 149.447 48.652 1.00 56.40 O
ATOM 5 O5' A A 304 7.822 149.740 46.597 1.00 51.45 O
ATOM 6 C5' A A 304 8.548 150.509 45.628 1.00 49.15 C
ATOM 7 C4' A A 304 9.859 149.839 45.312 1.00 48.19 C
ATOM 8 O4' A A 304 10.625 149.695 46.536 1.00 47.59 O
ATOM 9 C3' A A 304 9.742 148.433 44.751 1.00 47.69 C
ATOM 10 O3' A A 304 9.607 148.501 43.327 1.00 49.11 O
ATOM 11 C2' A A 304 11.080 147.813 45.148 1.00 47.39 C
ATOM 12 O2' A A 304 12.125 148.177 44.272 1.00 47.44 O
ATOM 13 C1' A A 304 11.348 148.478 46.503 1.00 46.92 C
ATOM 14 N9 A A 304 10.986 147.686 47.681 1.00 46.30 N
ATOM 15 C8 A A 304 9.829 147.752 48.416 1.00 46.05 C
ATOM 16 N7 A A 304 9.802 146.930 49.436 1.00 45.97 N
ATOM 17 C5 A A 304 11.022 146.274 49.368 1.00 45.24 C
ATOM 18 C6 A A 304 11.607 145.279 50.171 1.00 44.49 C
ATOM 19 N6 A A 304 11.019 144.749 51.243 1.00 44.29 N
ATOM 20 N1 A A 304 12.837 144.842 49.830 1.00 43.89 N
ATOM 21 C2 A A 304 13.429 145.372 48.758 1.00 42.26 C
ATOM 22 N3 A A 304 12.985 146.308 47.930 1.00 44.03 N
ATOM 23 C4 A A 304 11.760 146.725 48.291 1.00 45.31 C
ATOM 24 P A A 305 8.282 147.946 42.598 1.00 48.62 P
ATOM 25 OP1 A A 305 8.372 148.385 41.183 1.00 48.09 O
ATOM 26 OP2 A A 305 7.094 148.327 43.411 1.00 48.48 O
ATOM 27 O5' A A 305 8.443 146.359 42.592 1.00 47.65 O
TER
ATOM 1 O3' U B 323 19.280 147.250 40.657 1.00 46.71 O
ATOM 2 P G B 324 18.128 147.757 41.655 1.00 47.05 P
ATOM 3 OP1 G B 324 16.824 147.170 41.260 1.00 46.64 O
ATOM 4 OP2 G B 324 18.268 149.229 41.749 1.00 48.95 O
ATOM 5 O5' G B 324 18.586 147.187 43.067 1.00 49.69 O
ATOM 6 C5' G B 324 17.924 146.076 43.651 1.00 46.36 C
ATOM 7 C4' G B 324 17.465 146.425 45.039 1.00 44.84 C
ATOM 8 O4' G B 324 17.153 147.843 45.148 1.00 43.74 O
ATOM 9 C3' G B 324 16.198 145.683 45.423 1.00 45.66 C
ATOM 10 O3' G B 324 16.228 145.455 46.823 1.00 44.70 O
ATOM 11 C2' G B 324 15.123 146.693 45.029 1.00 44.14 C
ATOM 12 O2' G B 324 13.890 146.503 45.673 1.00 46.30 O
ATOM 13 C1' G B 324 15.782 148.001 45.459 1.00 44.62 C
ATOM 14 N9 G B 324 15.288 149.199 44.785 1.00 45.57 N
ATOM 15 C8 G B 324 15.477 149.547 43.468 1.00 44.89 C
ATOM 16 N7 G B 324 14.957 150.707 43.163 1.00 45.30 N
ATOM 17 C5 G B 324 14.380 151.150 44.347 1.00 44.53 C
ATOM 18 C6 G B 324 13.683 152.360 44.638 1.00 44.52 C
ATOM 19 O6 G B 324 13.429 153.310 43.884 1.00 44.38 O
ATOM 20 N1 G B 324 13.273 152.406 45.963 1.00 43.10 N
ATOM 21 C2 G B 324 13.501 151.425 46.891 1.00 45.38 C
ATOM 22 N2 G B 324 13.033 151.666 48.121 1.00 45.79 N
ATOM 23 N3 G B 324 14.146 150.294 46.636 1.00 45.62 N
ATOM 24 C4 G B 324 14.559 150.226 45.354 1.00 45.06 C
ATOM 25 P A B 325 17.104 144.246 47.415 1.00 42.94 P
ATOM 26 OP1 A B 325 17.435 144.641 48.796 1.00 43.83 O
ATOM 27 OP2 A B 325 18.194 143.875 46.470 1.00 41.16 O
ATOM 28 O5' A B 325 16.076 143.039 47.529 1.00 44.87 O
TER
Atoms:
OP1: (5.922,151.314,46.965)
OP2: (6.423,149.447,48.652)
C3': (9.742,148.433,44.751)
C1': (11.348,148.478,46.503)
C5': (8.548,150.509,45.628)
O4': (10.625,149.695,46.536)
C8: (9.829,147.752,48.416)
O2': (12.125,148.177,44.272)
C6: (11.607,145.279,50.171)
C5: (11.022,146.274,49.368)
C4: (11.760,146.725,48.291)
P: (6.904,150.463,47.677)
C4': (9.859,149.839,45.312)
C2': (11.080,147.813,45.148)
C2: (13.429,145.372,48.758)
N1: (12.837,144.842,49.830)
N3: (12.985,146.308,47.930)
N6: (11.019,144.749,51.243)
N7: (9.802,146.930,49.436)
N9: (10.986,147.686,47.681)
O5': (7.822,149.740,46.597)
O3': (9.607,148.501,43.327)
OP2: (6.423,149.447,48.652)
C3': (9.742,148.433,44.751)
C1': (11.348,148.478,46.503)
C5': (8.548,150.509,45.628)
O4': (10.625,149.695,46.536)
C8: (9.829,147.752,48.416)
O2': (12.125,148.177,44.272)
C6: (11.607,145.279,50.171)
C5: (11.022,146.274,49.368)
C4: (11.760,146.725,48.291)
P: (6.904,150.463,47.677)
C4': (9.859,149.839,45.312)
C2': (11.080,147.813,45.148)
C2: (13.429,145.372,48.758)
N1: (12.837,144.842,49.830)
N3: (12.985,146.308,47.930)
N6: (11.019,144.749,51.243)
N7: (9.802,146.930,49.436)
N9: (10.986,147.686,47.681)
O5': (7.822,149.740,46.597)
O3': (9.607,148.501,43.327)
OP1: (16.824,147.170,41.260)
OP2: (18.268,149.229,41.749)
C3': (16.198,145.683,45.423)
C1': (15.782,148.001,45.459)
C5': (17.924,146.076,43.651)
O6: (13.429,153.310,43.884)
O4': (17.153,147.843,45.148)
C8: (15.477,149.547,43.468)
C2: (13.501,151.425,46.891)
C6: (13.683,152.360,44.638)
C5: (14.380,151.150,44.347)
C4: (14.559,150.226,45.354)
P: (18.128,147.757,41.655)
C4': (17.465,146.425,45.039)
C2': (15.123,146.693,45.029)
O2': (13.890,146.503,45.673)
N1: (13.273,152.406,45.963)
N2: (13.033,151.666,48.121)
N3: (14.146,150.294,46.636)
N7: (14.957,150.707,43.163)
N9: (15.288,149.199,44.785)
O5': (18.586,147.187,43.067)
O3': (16.228,145.455,46.823)
OP2: (18.268,149.229,41.749)
C3': (16.198,145.683,45.423)
C1': (15.782,148.001,45.459)
C5': (17.924,146.076,43.651)
O6: (13.429,153.310,43.884)
O4': (17.153,147.843,45.148)
C8: (15.477,149.547,43.468)
C2: (13.501,151.425,46.891)
C6: (13.683,152.360,44.638)
C5: (14.380,151.150,44.347)
C4: (14.559,150.226,45.354)
P: (18.128,147.757,41.655)
C4': (17.465,146.425,45.039)
C2': (15.123,146.693,45.029)
O2': (13.890,146.503,45.673)
N1: (13.273,152.406,45.963)
N2: (13.033,151.666,48.121)
N3: (14.146,150.294,46.636)
N7: (14.957,150.707,43.163)
N9: (15.288,149.199,44.785)
O5': (18.586,147.187,43.067)
O3': (16.228,145.455,46.823)
Image (generated by PyMOL):