Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P99:P46
Extra
PDB:
ATOM 1 O3' A A 98 -20.410 -34.732 20.541 1.00 64.14 O
ATOM 2 P A A 99 -21.073 -33.284 20.333 1.00 64.87 P
ATOM 3 OP1 A A 99 -20.568 -32.413 21.422 1.00 64.82 O
ATOM 4 OP2 A A 99 -22.534 -33.451 20.148 1.00 64.56 O
ATOM 5 O5' A A 99 -20.457 -32.776 18.946 1.00 64.11 O
ATOM 6 C5' A A 99 -19.196 -32.123 18.900 1.00 63.45 C
ATOM 7 C4' A A 99 -18.541 -32.315 17.546 1.00 63.14 C
ATOM 8 O4' A A 99 -18.879 -33.619 17.010 1.00 62.91 O
ATOM 9 C3' A A 99 -18.996 -31.378 16.438 1.00 62.98 C
ATOM 10 O3' A A 99 -18.414 -30.084 16.560 1.00 63.38 O
ATOM 11 C2' A A 99 -18.468 -32.136 15.223 1.00 62.75 C
ATOM 12 O2' A A 99 -17.071 -32.002 15.025 1.00 63.02 O
ATOM 13 C1' A A 99 -18.827 -33.573 15.596 1.00 62.30 C
ATOM 14 N9 A A 99 -20.114 -33.955 15.017 1.00 61.31 N
ATOM 15 C8 A A 99 -21.332 -34.026 15.637 1.00 60.98 C
ATOM 16 N7 A A 99 -22.311 -34.386 14.841 1.00 60.67 N
ATOM 17 C5 A A 99 -21.694 -34.558 13.614 1.00 60.55 C
ATOM 18 C6 A A 99 -22.178 -34.934 12.345 1.00 60.63 C
ATOM 19 N6 A A 99 -23.461 -35.223 12.103 1.00 60.80 N
ATOM 20 N1 A A 99 -21.289 -35.011 11.329 1.00 60.82 N
ATOM 21 C2 A A 99 -20.001 -34.727 11.565 1.00 60.65 C
ATOM 22 N3 A A 99 -19.433 -34.361 12.714 1.00 60.57 N
ATOM 23 C4 A A 99 -20.340 -34.294 13.704 1.00 60.71 C
ATOM 24 P U A 100 -19.219 -28.777 16.098 1.00 63.50 P
ATOM 25 OP1 U A 100 -18.295 -27.630 16.234 1.00 63.83 O
ATOM 26 OP2 U A 100 -20.511 -28.749 16.818 1.00 63.32 O
ATOM 27 O5' U A 100 -19.481 -29.021 14.533 1.00 63.98 O
TER
ATOM 1 O3' A B 45 -22.473 -37.902 7.513 1.00 65.00 O
ATOM 2 P G B 46 -22.388 -37.200 6.078 1.00 65.50 P
ATOM 3 OP1 G B 46 -23.726 -36.656 5.756 1.00 65.69 O
ATOM 4 OP2 G B 46 -21.749 -38.150 5.138 1.00 65.57 O
ATOM 5 O5' G B 46 -21.399 -35.969 6.353 1.00 66.19 O
ATOM 6 C5' G B 46 -21.803 -34.903 7.222 1.00 66.98 C
ATOM 7 C4' G B 46 -20.631 -34.067 7.710 1.00 67.40 C
ATOM 8 O4' G B 46 -19.621 -34.928 8.291 1.00 67.37 O
ATOM 9 C3' G B 46 -19.901 -33.273 6.634 1.00 68.04 C
ATOM 10 O3' G B 46 -20.526 -32.004 6.425 1.00 68.96 O
ATOM 11 C2' G B 46 -18.500 -33.137 7.225 1.00 67.83 C
ATOM 12 O2' G B 46 -18.386 -32.070 8.148 1.00 68.06 O
ATOM 13 C1' G B 46 -18.324 -34.473 7.939 1.00 67.51 C
ATOM 14 N9 G B 46 -17.654 -35.490 7.125 1.00 67.18 N
ATOM 15 C8 G B 46 -18.234 -36.601 6.562 1.00 67.19 C
ATOM 16 N7 G B 46 -17.404 -37.342 5.886 1.00 67.40 N
ATOM 17 C5 G B 46 -16.188 -36.684 6.005 1.00 67.20 C
ATOM 18 C6 G B 46 -14.917 -37.022 5.478 1.00 67.08 C
ATOM 19 O6 G B 46 -14.617 -38.001 4.784 1.00 67.23 O
ATOM 20 N1 G B 46 -13.936 -36.094 5.827 1.00 66.96 N
ATOM 21 C2 G B 46 -14.162 -34.974 6.594 1.00 66.82 C
ATOM 22 N2 G B 46 -13.099 -34.194 6.825 1.00 66.41 N
ATOM 23 N3 G B 46 -15.351 -34.645 7.095 1.00 67.10 N
ATOM 24 C4 G B 46 -16.321 -35.541 6.765 1.00 67.13 C
ATOM 25 P A B 47 -20.600 -31.356 4.959 1.00 69.70 P
ATOM 26 OP1 A B 47 -21.387 -30.107 5.054 1.00 69.83 O
ATOM 27 OP2 A B 47 -21.016 -32.403 3.999 1.00 69.58 O
ATOM 28 O5' A B 47 -19.080 -30.958 4.662 1.00 70.62 O
TER
ATOM 2 P A A 99 -21.073 -33.284 20.333 1.00 64.87 P
ATOM 3 OP1 A A 99 -20.568 -32.413 21.422 1.00 64.82 O
ATOM 4 OP2 A A 99 -22.534 -33.451 20.148 1.00 64.56 O
ATOM 5 O5' A A 99 -20.457 -32.776 18.946 1.00 64.11 O
ATOM 6 C5' A A 99 -19.196 -32.123 18.900 1.00 63.45 C
ATOM 7 C4' A A 99 -18.541 -32.315 17.546 1.00 63.14 C
ATOM 8 O4' A A 99 -18.879 -33.619 17.010 1.00 62.91 O
ATOM 9 C3' A A 99 -18.996 -31.378 16.438 1.00 62.98 C
ATOM 10 O3' A A 99 -18.414 -30.084 16.560 1.00 63.38 O
ATOM 11 C2' A A 99 -18.468 -32.136 15.223 1.00 62.75 C
ATOM 12 O2' A A 99 -17.071 -32.002 15.025 1.00 63.02 O
ATOM 13 C1' A A 99 -18.827 -33.573 15.596 1.00 62.30 C
ATOM 14 N9 A A 99 -20.114 -33.955 15.017 1.00 61.31 N
ATOM 15 C8 A A 99 -21.332 -34.026 15.637 1.00 60.98 C
ATOM 16 N7 A A 99 -22.311 -34.386 14.841 1.00 60.67 N
ATOM 17 C5 A A 99 -21.694 -34.558 13.614 1.00 60.55 C
ATOM 18 C6 A A 99 -22.178 -34.934 12.345 1.00 60.63 C
ATOM 19 N6 A A 99 -23.461 -35.223 12.103 1.00 60.80 N
ATOM 20 N1 A A 99 -21.289 -35.011 11.329 1.00 60.82 N
ATOM 21 C2 A A 99 -20.001 -34.727 11.565 1.00 60.65 C
ATOM 22 N3 A A 99 -19.433 -34.361 12.714 1.00 60.57 N
ATOM 23 C4 A A 99 -20.340 -34.294 13.704 1.00 60.71 C
ATOM 24 P U A 100 -19.219 -28.777 16.098 1.00 63.50 P
ATOM 25 OP1 U A 100 -18.295 -27.630 16.234 1.00 63.83 O
ATOM 26 OP2 U A 100 -20.511 -28.749 16.818 1.00 63.32 O
ATOM 27 O5' U A 100 -19.481 -29.021 14.533 1.00 63.98 O
TER
ATOM 1 O3' A B 45 -22.473 -37.902 7.513 1.00 65.00 O
ATOM 2 P G B 46 -22.388 -37.200 6.078 1.00 65.50 P
ATOM 3 OP1 G B 46 -23.726 -36.656 5.756 1.00 65.69 O
ATOM 4 OP2 G B 46 -21.749 -38.150 5.138 1.00 65.57 O
ATOM 5 O5' G B 46 -21.399 -35.969 6.353 1.00 66.19 O
ATOM 6 C5' G B 46 -21.803 -34.903 7.222 1.00 66.98 C
ATOM 7 C4' G B 46 -20.631 -34.067 7.710 1.00 67.40 C
ATOM 8 O4' G B 46 -19.621 -34.928 8.291 1.00 67.37 O
ATOM 9 C3' G B 46 -19.901 -33.273 6.634 1.00 68.04 C
ATOM 10 O3' G B 46 -20.526 -32.004 6.425 1.00 68.96 O
ATOM 11 C2' G B 46 -18.500 -33.137 7.225 1.00 67.83 C
ATOM 12 O2' G B 46 -18.386 -32.070 8.148 1.00 68.06 O
ATOM 13 C1' G B 46 -18.324 -34.473 7.939 1.00 67.51 C
ATOM 14 N9 G B 46 -17.654 -35.490 7.125 1.00 67.18 N
ATOM 15 C8 G B 46 -18.234 -36.601 6.562 1.00 67.19 C
ATOM 16 N7 G B 46 -17.404 -37.342 5.886 1.00 67.40 N
ATOM 17 C5 G B 46 -16.188 -36.684 6.005 1.00 67.20 C
ATOM 18 C6 G B 46 -14.917 -37.022 5.478 1.00 67.08 C
ATOM 19 O6 G B 46 -14.617 -38.001 4.784 1.00 67.23 O
ATOM 20 N1 G B 46 -13.936 -36.094 5.827 1.00 66.96 N
ATOM 21 C2 G B 46 -14.162 -34.974 6.594 1.00 66.82 C
ATOM 22 N2 G B 46 -13.099 -34.194 6.825 1.00 66.41 N
ATOM 23 N3 G B 46 -15.351 -34.645 7.095 1.00 67.10 N
ATOM 24 C4 G B 46 -16.321 -35.541 6.765 1.00 67.13 C
ATOM 25 P A B 47 -20.600 -31.356 4.959 1.00 69.70 P
ATOM 26 OP1 A B 47 -21.387 -30.107 5.054 1.00 69.83 O
ATOM 27 OP2 A B 47 -21.016 -32.403 3.999 1.00 69.58 O
ATOM 28 O5' A B 47 -19.080 -30.958 4.662 1.00 70.62 O
TER
Atoms:
OP1: (-20.568,-32.413,21.422)
OP2: (-22.534,-33.451,20.148)
C3': (-18.996,-31.378,16.438)
C1': (-18.827,-33.573,15.596)
C5': (-19.196,-32.123,18.900)
O4': (-18.879,-33.619,17.010)
C8: (-21.332,-34.026,15.637)
O2': (-17.071,-32.002,15.025)
C6: (-22.178,-34.934,12.345)
C5: (-21.694,-34.558,13.614)
C4: (-20.340,-34.294,13.704)
P: (-21.073,-33.284,20.333)
C4': (-18.541,-32.315,17.546)
C2': (-18.468,-32.136,15.223)
C2: (-20.001,-34.727,11.565)
N1: (-21.289,-35.011,11.329)
N3: (-19.433,-34.361,12.714)
N6: (-23.461,-35.223,12.103)
N7: (-22.311,-34.386,14.841)
N9: (-20.114,-33.955,15.017)
O5': (-20.457,-32.776,18.946)
O3': (-18.414,-30.084,16.560)
OP2: (-22.534,-33.451,20.148)
C3': (-18.996,-31.378,16.438)
C1': (-18.827,-33.573,15.596)
C5': (-19.196,-32.123,18.900)
O4': (-18.879,-33.619,17.010)
C8: (-21.332,-34.026,15.637)
O2': (-17.071,-32.002,15.025)
C6: (-22.178,-34.934,12.345)
C5: (-21.694,-34.558,13.614)
C4: (-20.340,-34.294,13.704)
P: (-21.073,-33.284,20.333)
C4': (-18.541,-32.315,17.546)
C2': (-18.468,-32.136,15.223)
C2: (-20.001,-34.727,11.565)
N1: (-21.289,-35.011,11.329)
N3: (-19.433,-34.361,12.714)
N6: (-23.461,-35.223,12.103)
N7: (-22.311,-34.386,14.841)
N9: (-20.114,-33.955,15.017)
O5': (-20.457,-32.776,18.946)
O3': (-18.414,-30.084,16.560)
OP1: (-23.726,-36.656,5.756)
OP2: (-21.749,-38.150,5.138)
C3': (-19.901,-33.273,6.634)
C1': (-18.324,-34.473,7.939)
C5': (-21.803,-34.903,7.222)
O6: (-14.617,-38.001,4.784)
O4': (-19.621,-34.928,8.291)
C8: (-18.234,-36.601,6.562)
C2: (-14.162,-34.974,6.594)
C6: (-14.917,-37.022,5.478)
C5: (-16.188,-36.684,6.005)
C4: (-16.321,-35.541,6.765)
P: (-22.388,-37.200,6.078)
C4': (-20.631,-34.067,7.710)
C2': (-18.500,-33.137,7.225)
O2': (-18.386,-32.070,8.148)
N1: (-13.936,-36.094,5.827)
N2: (-13.099,-34.194,6.825)
N3: (-15.351,-34.645,7.095)
N7: (-17.404,-37.342,5.886)
N9: (-17.654,-35.490,7.125)
O5': (-21.399,-35.969,6.353)
O3': (-20.526,-32.004,6.425)
OP2: (-21.749,-38.150,5.138)
C3': (-19.901,-33.273,6.634)
C1': (-18.324,-34.473,7.939)
C5': (-21.803,-34.903,7.222)
O6: (-14.617,-38.001,4.784)
O4': (-19.621,-34.928,8.291)
C8: (-18.234,-36.601,6.562)
C2: (-14.162,-34.974,6.594)
C6: (-14.917,-37.022,5.478)
C5: (-16.188,-36.684,6.005)
C4: (-16.321,-35.541,6.765)
P: (-22.388,-37.200,6.078)
C4': (-20.631,-34.067,7.710)
C2': (-18.500,-33.137,7.225)
O2': (-18.386,-32.070,8.148)
N1: (-13.936,-36.094,5.827)
N2: (-13.099,-34.194,6.825)
N3: (-15.351,-34.645,7.095)
N7: (-17.404,-37.342,5.886)
N9: (-17.654,-35.490,7.125)
O5': (-21.399,-35.969,6.353)
O3': (-20.526,-32.004,6.425)
Image (generated by PyMOL):