ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A608:A260

Extra

PDB:
ATOM 1 O3' A A 607 -77.939 -78.881 68.732 1.00 0.01 O
ATOM 2 P A A 608 -76.510 -79.379 69.268 1.00 0.01 P
ATOM 3 OP1 A A 608 -75.612 -79.506 68.089 1.00 0.01 O
ATOM 4 OP2 A A 608 -76.740 -80.559 70.124 1.00 0.01 O
ATOM 5 O5' A A 608 -76.033 -78.177 70.154 1.00 0.01 O
ATOM 6 C5' A A 608 -75.800 -76.921 69.575 1.00 0.01 C
ATOM 7 C4' A A 608 -75.603 -75.909 70.634 1.00 0.01 C
ATOM 8 O4' A A 608 -76.835 -75.770 71.375 1.00 0.01 O
ATOM 9 C3' A A 608 -74.565 -76.265 71.689 1.00 0.01 C
ATOM 10 O3' A A 608 -73.247 -75.951 71.272 1.00 0.01 O
ATOM 11 C2' A A 608 -75.029 -75.449 72.871 1.00 0.01 C
ATOM 12 O2' A A 608 -74.665 -74.088 72.704 1.00 0.01 O
ATOM 13 C1' A A 608 -76.548 -75.568 72.734 1.00 0.01 C
ATOM 14 N9 A A 608 -77.059 -76.711 73.486 1.00 0.01 N
ATOM 15 C8 A A 608 -77.262 -77.993 73.085 1.00 0.01 C
ATOM 16 N7 A A 608 -77.688 -78.774 74.046 1.00 0.01 N
ATOM 17 C5 A A 608 -77.747 -77.940 75.131 1.00 0.01 C
ATOM 18 C6 A A 608 -78.122 -78.157 76.450 1.00 0.01 C
ATOM 19 N6 A A 608 -78.527 -79.345 76.908 1.00 0.01 N
ATOM 20 N1 A A 608 -78.066 -77.103 77.293 1.00 0.01 N
ATOM 21 C2 A A 608 -77.666 -75.912 76.828 1.00 0.01 C
ATOM 22 N3 A A 608 -77.295 -75.586 75.589 1.00 0.01 N
ATOM 23 C4 A A 608 -77.366 -76.666 74.797 1.00 0.01 C
ATOM 24 P C A 609 -71.991 -76.896 71.661 1.00 0.01 P
ATOM 25 OP1 C A 609 -70.754 -76.079 71.465 1.00 0.01 O
ATOM 26 OP2 C A 609 -72.137 -78.178 70.892 1.00 0.01 O
ATOM 27 O5' C A 609 -72.214 -77.159 73.223 1.00 0.01 O
TER

ATOM 1 O3' G B 259 -80.523 -74.912 81.320 1.00 0.01 O
ATOM 2 P G B 260 -79.223 -74.849 82.238 1.00 3.45 P
ATOM 3 OP1 G B 260 -79.349 -75.942 83.245 1.00 3.45 O
ATOM 4 OP2 G B 260 -79.069 -73.445 82.722 1.00 3.45 O
ATOM 5 O5' G B 260 -78.085 -75.180 81.212 1.00 3.45 O
ATOM 6 C5' G B 260 -76.864 -74.502 81.282 1.00 3.45 C
ATOM 7 C4' G B 260 -76.099 -74.697 80.032 1.00 3.45 C
ATOM 8 O4' G B 260 -76.663 -73.871 78.985 1.00 3.45 O
ATOM 9 C3' G B 260 -74.646 -74.314 80.094 1.00 3.45 C
ATOM 10 O3' G B 260 -73.853 -75.350 80.655 1.00 3.45 O
ATOM 11 C2' G B 260 -74.336 -74.023 78.640 1.00 3.45 C
ATOM 12 O2' G B 260 -74.156 -75.231 77.915 1.00 3.45 O
ATOM 13 C1' G B 260 -75.640 -73.365 78.176 1.00 3.45 C
ATOM 14 N9 G B 260 -75.608 -71.894 78.331 1.00 3.42 N
ATOM 15 C8 G B 260 -76.387 -71.091 79.095 1.00 3.42 C
ATOM 16 N7 G B 260 -76.057 -69.842 79.012 1.00 3.42 N
ATOM 17 C5 G B 260 -75.003 -69.800 78.140 1.00 3.42 C
ATOM 18 C6 G B 260 -74.218 -68.722 77.650 1.00 3.42 C
ATOM 19 O6 G B 260 -74.299 -67.508 77.892 1.00 3.42 O
ATOM 20 N1 G B 260 -73.228 -69.175 76.780 1.00 3.42 N
ATOM 21 C2 G B 260 -73.035 -70.486 76.437 1.00 3.42 C
ATOM 22 N2 G B 260 -72.056 -70.787 75.588 1.00 3.42 N
ATOM 23 N3 G B 260 -73.763 -71.476 76.878 1.00 3.42 N
ATOM 24 C4 G B 260 -74.723 -71.062 77.720 1.00 3.42 C
ATOM 25 P A B 261 -72.453 -75.017 81.370 1.00 0.02 P
ATOM 26 OP1 A B 261 -71.840 -76.313 81.760 1.00 0.02 O
ATOM 27 OP2 A B 261 -72.724 -74.001 82.420 1.00 0.02 O
ATOM 28 O5' A B 261 -71.620 -74.360 80.202 1.00 0.02 O
TER

Atoms:
OP1: (-75.612,-79.506,68.089)
OP2: (-76.740,-80.559,70.124)
C3': (-74.565,-76.265,71.689)
C1': (-76.548,-75.568,72.734)
C5': (-75.800,-76.921,69.575)
O4': (-76.835,-75.770,71.375)
C8: (-77.262,-77.993,73.085)
O2': (-74.665,-74.088,72.704)
C6: (-78.122,-78.157,76.450)
C5: (-77.747,-77.940,75.131)
C4: (-77.366,-76.666,74.797)
P: (-76.510,-79.379,69.268)
C4': (-75.603,-75.909,70.634)
C2': (-75.029,-75.449,72.871)
C2: (-77.666,-75.912,76.828)
N1: (-78.066,-77.103,77.293)
N3: (-77.295,-75.586,75.589)
N6: (-78.527,-79.345,76.908)
N7: (-77.688,-78.774,74.046)
N9: (-77.059,-76.711,73.486)
O5': (-76.033,-78.177,70.154)
O3': (-73.247,-75.951,71.272)
OP1: (-79.349,-75.942,83.245)
OP2: (-79.069,-73.445,82.722)
C3': (-74.646,-74.314,80.094)
C1': (-75.640,-73.365,78.176)
C5': (-76.864,-74.502,81.282)
O6: (-74.299,-67.508,77.892)
O4': (-76.663,-73.871,78.985)
C8: (-76.387,-71.091,79.095)
C2: (-73.035,-70.486,76.437)
C6: (-74.218,-68.722,77.650)
C5: (-75.003,-69.800,78.140)
C4: (-74.723,-71.062,77.720)
P: (-79.223,-74.849,82.238)
C4': (-76.099,-74.697,80.032)
C2': (-74.336,-74.023,78.640)
O2': (-74.156,-75.231,77.915)
N1: (-73.228,-69.175,76.780)
N2: (-72.056,-70.787,75.588)
N3: (-73.763,-71.476,76.878)
N7: (-76.057,-69.842,79.012)
N9: (-75.608,-71.894,78.331)
O5': (-78.085,-75.180,81.212)
O3': (-73.853,-75.350,80.655)
Image (generated by PyMOL):
PyMOL image
show in jmol