ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01937:01941

Extra

PDB:
ATOM 1 O3' C A1936 105.275 135.002 127.428 1.00 49.51 O
ATOM 2 P A A1937 104.305 135.701 128.496 1.00 51.01 P
ATOM 3 OP1 A A1937 104.942 136.982 128.910 1.00 51.53 O
ATOM 4 OP2 A A1937 103.896 134.716 129.525 1.00 49.91 O
ATOM 5 O5' A A1937 103.026 136.089 127.643 1.00 53.47 O
ATOM 6 C5' A A1937 103.092 137.117 126.640 1.00 52.11 C
ATOM 7 C4' A A1937 101.773 137.211 125.927 1.00 52.29 C
ATOM 8 O4' A A1937 101.565 136.013 125.132 1.00 53.01 O
ATOM 9 C3' A A1937 100.574 137.264 126.857 1.00 51.17 C
ATOM 10 O3' A A1937 100.345 138.593 127.303 1.00 49.39 O
ATOM 11 C2' A A1937 99.463 136.727 125.968 1.00 51.78 C
ATOM 12 O2' A A1937 99.032 137.704 125.042 1.00 50.45 O
ATOM 13 C1' A A1937 100.205 135.625 125.205 1.00 52.70 C
ATOM 14 N9 A A1937 100.153 134.311 125.847 1.00 54.66 N
ATOM 15 C8 A A1937 100.992 133.825 126.815 1.00 55.84 C
ATOM 16 N7 A A1937 100.720 132.598 127.186 1.00 56.62 N
ATOM 17 C5 A A1937 99.624 132.252 126.413 1.00 56.57 C
ATOM 18 C6 A A1937 98.862 131.073 126.328 1.00 56.44 C
ATOM 19 N6 A A1937 99.100 129.984 127.057 1.00 56.52 N
ATOM 20 N1 A A1937 97.834 131.053 125.457 1.00 55.64 N
ATOM 21 C2 A A1937 97.595 132.147 124.724 1.00 55.72 C
ATOM 22 N3 A A1937 98.239 133.311 124.710 1.00 55.92 N
ATOM 23 C4 A A1937 99.258 133.300 125.587 1.00 56.60 C
ATOM 24 P U A1938 99.659 138.855 128.733 1.00 50.29 P
ATOM 25 OP1 U A1938 99.599 140.329 128.919 1.00 48.72 O
ATOM 26 OP2 U A1938 100.327 138.005 129.751 1.00 50.61 O
ATOM 27 O5' U A1938 98.173 138.307 128.572 1.00 50.47 O
TER

ATOM 1 O3' A B1940 92.402 129.681 128.938 1.00 39.15 O
ATOM 2 P G B1941 93.615 129.486 127.913 1.00 40.63 P
ATOM 3 OP1 G B1941 93.678 128.028 127.613 1.00 40.87 O
ATOM 4 OP2 G B1941 94.819 130.175 128.440 1.00 43.39 O
ATOM 5 O5' G B1941 93.134 130.265 126.612 1.00 41.81 O
ATOM 6 C5' G B1941 91.930 129.877 125.934 1.00 39.82 C
ATOM 7 C4' G B1941 92.132 129.933 124.447 1.00 36.75 C
ATOM 8 O4' G B1941 92.071 131.314 124.006 1.00 37.04 O
ATOM 9 C3' G B1941 93.458 129.379 123.939 1.00 37.51 C
ATOM 10 O3' G B1941 93.246 128.749 122.688 1.00 36.79 O
ATOM 11 C2' G B1941 94.280 130.646 123.725 1.00 39.33 C
ATOM 12 O2' G B1941 95.299 130.502 122.760 1.00 40.32 O
ATOM 13 C1' G B1941 93.208 131.602 123.219 1.00 40.15 C
ATOM 14 N9 G B1941 93.522 133.022 123.343 1.00 42.74 N
ATOM 15 C8 G B1941 93.841 133.707 124.489 1.00 43.43 C
ATOM 16 N7 G B1941 94.067 134.976 124.280 1.00 45.04 N
ATOM 17 C5 G B1941 93.894 135.140 122.912 1.00 44.46 C
ATOM 18 C6 G B1941 94.027 136.299 122.097 1.00 45.19 C
ATOM 19 O6 G B1941 94.372 137.440 122.424 1.00 44.94 O
ATOM 20 N1 G B1941 93.730 136.026 120.771 1.00 46.43 N
ATOM 21 C2 G B1941 93.380 134.798 120.279 1.00 47.33 C
ATOM 22 N2 G B1941 93.131 134.748 118.963 1.00 48.76 N
ATOM 23 N3 G B1941 93.281 133.702 121.018 1.00 45.75 N
ATOM 24 C4 G B1941 93.547 133.946 122.319 1.00 44.31 C
ATOM 25 P U B1942 93.915 127.326 122.392 1.00 36.86 P
ATOM 26 OP1 U B1942 93.531 126.399 123.487 1.00 36.82 O
ATOM 27 OP2 U B1942 95.343 127.519 122.064 1.00 38.43 O
ATOM 28 O5' U B1942 93.200 126.856 121.052 1.00 39.79 O
TER

Atoms:
OP1: (104.942,136.982,128.910)
OP2: (103.896,134.716,129.525)
C3': (100.574,137.264,126.857)
C1': (100.205,135.625,125.205)
C5': (103.092,137.117,126.640)
O4': (101.565,136.013,125.132)
C8: (100.992,133.825,126.815)
O2': (99.032,137.704,125.042)
C6: (98.862,131.073,126.328)
C5: (99.624,132.252,126.413)
C4: (99.258,133.300,125.587)
P: (104.305,135.701,128.496)
C4': (101.773,137.211,125.927)
C2': (99.463,136.727,125.968)
C2: (97.595,132.147,124.724)
N1: (97.834,131.053,125.457)
N3: (98.239,133.311,124.710)
N6: (99.100,129.984,127.057)
N7: (100.720,132.598,127.186)
N9: (100.153,134.311,125.847)
O5': (103.026,136.089,127.643)
O3': (100.345,138.593,127.303)
OP1: (93.678,128.028,127.613)
OP2: (94.819,130.175,128.440)
C3': (93.458,129.379,123.939)
C1': (93.208,131.602,123.219)
C5': (91.930,129.877,125.934)
O6: (94.372,137.440,122.424)
O4': (92.071,131.314,124.006)
C8: (93.841,133.707,124.489)
C2: (93.380,134.798,120.279)
C6: (94.027,136.299,122.097)
C5: (93.894,135.140,122.912)
C4: (93.547,133.946,122.319)
P: (93.615,129.486,127.913)
C4': (92.132,129.933,124.447)
C2': (94.280,130.646,123.725)
O2': (95.299,130.502,122.760)
N1: (93.730,136.026,120.771)
N2: (93.131,134.748,118.963)
N3: (93.281,133.702,121.018)
N7: (94.067,134.976,124.280)
N9: (93.522,133.022,123.343)
O5': (93.134,130.265,126.612)
O3': (93.246,128.749,122.688)
Image (generated by PyMOL):
PyMOL image
show in jmol