Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A50:A54
Extra
PDB:
ATOM 1 O3' A A 49 -18.290 50.918 4.737 1.00 32.64 O
ATOM 2 P A A 50 -18.783 52.331 4.175 1.00 33.68 P
ATOM 3 OP1 A A 50 -20.259 52.371 4.288 1.00 33.39 O
ATOM 4 OP2 A A 50 -18.154 52.560 2.854 1.00 33.34 O
ATOM 5 O5' A A 50 -18.127 53.373 5.202 1.00 34.09 O
ATOM 6 C5' A A 50 -18.492 53.367 6.589 1.00 34.41 C
ATOM 7 C4' A A 50 -17.424 53.981 7.487 1.00 34.12 C
ATOM 8 O4' A A 50 -16.155 53.288 7.345 1.00 33.21 O
ATOM 9 C3' A A 50 -17.062 55.434 7.207 1.00 34.21 C
ATOM 10 O3' A A 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 11 C2' A A 50 -15.729 55.538 7.944 1.00 33.52 C
ATOM 12 O2' A A 50 -15.877 55.652 9.348 1.00 33.53 O
ATOM 13 C1' A A 50 -15.091 54.199 7.567 1.00 32.64 C
ATOM 14 N9 A A 50 -14.267 54.286 6.361 1.00 32.11 N
ATOM 15 C8 A A 50 -14.660 54.042 5.070 1.00 32.34 C
ATOM 16 N7 A A 50 -13.713 54.205 4.177 1.00 32.23 N
ATOM 17 C5 A A 50 -12.616 54.588 4.933 1.00 31.88 C
ATOM 18 C6 A A 50 -11.287 54.919 4.583 1.00 31.58 C
ATOM 19 N6 A A 50 -10.835 54.901 3.326 1.00 31.33 N
ATOM 20 N1 A A 50 -10.435 55.259 5.583 1.00 31.50 N
ATOM 21 C2 A A 50 -10.886 55.273 6.847 1.00 31.04 C
ATOM 22 N3 A A 50 -12.111 54.981 7.292 1.00 31.26 N
ATOM 23 C4 A A 50 -12.938 54.645 6.281 1.00 31.74 C
ATOM 24 P U A 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 25 OP1 U A 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 26 OP2 U A 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 27 O5' U A 51 -17.347 58.422 6.545 1.00 36.99 O
TER
ATOM 1 O3' G B 53 -11.890 57.586 11.980 1.00 32.45 O
ATOM 2 P G B 54 -10.514 57.849 12.756 1.00 31.72 P
ATOM 3 OP1 G B 54 -10.396 56.814 13.805 1.00 31.58 O
ATOM 4 OP2 G B 54 -10.450 59.276 13.133 1.00 32.21 O
ATOM 5 O5' G B 54 -9.397 57.615 11.635 1.00 31.93 O
ATOM 6 C5' G B 54 -9.113 56.307 11.157 1.00 32.01 C
ATOM 7 C4' G B 54 -8.150 56.356 9.990 1.00 32.37 C
ATOM 8 O4' G B 54 -8.678 57.187 8.926 1.00 32.99 O
ATOM 9 C3' G B 54 -6.806 56.986 10.295 1.00 32.54 C
ATOM 10 O3' G B 54 -5.979 56.075 10.982 1.00 33.47 O
ATOM 11 C2' G B 54 -6.316 57.289 8.887 1.00 32.79 C
ATOM 12 O2' G B 54 -5.824 56.168 8.183 1.00 32.75 O
ATOM 13 C1' G B 54 -7.600 57.804 8.241 1.00 33.28 C
ATOM 14 N9 G B 54 -7.709 59.262 8.338 1.00 33.53 N
ATOM 15 C8 G B 54 -8.584 59.986 9.114 1.00 33.51 C
ATOM 16 N7 G B 54 -8.439 61.276 8.998 1.00 33.86 N
ATOM 17 C5 G B 54 -7.398 61.423 8.091 1.00 33.88 C
ATOM 18 C6 G B 54 -6.791 62.596 7.569 1.00 33.89 C
ATOM 19 O6 G B 54 -7.066 63.777 7.817 1.00 33.78 O
ATOM 20 N1 G B 54 -5.763 62.303 6.671 1.00 33.88 N
ATOM 21 C2 G B 54 -5.367 61.032 6.319 1.00 33.60 C
ATOM 22 N2 G B 54 -4.358 60.939 5.442 1.00 33.49 N
ATOM 23 N3 G B 54 -5.930 59.926 6.797 1.00 33.57 N
ATOM 24 C4 G B 54 -6.936 60.192 7.674 1.00 33.73 C
ATOM 25 P G B 55 -4.957 56.593 12.101 1.00 33.60 P
ATOM 26 OP1 G B 55 -4.560 55.429 12.917 1.00 33.68 O
ATOM 27 OP2 G B 55 -5.527 57.778 12.776 1.00 33.83 O
ATOM 28 O5' G B 55 -3.713 57.067 11.215 1.00 34.50 O
TER
ATOM 2 P A A 50 -18.783 52.331 4.175 1.00 33.68 P
ATOM 3 OP1 A A 50 -20.259 52.371 4.288 1.00 33.39 O
ATOM 4 OP2 A A 50 -18.154 52.560 2.854 1.00 33.34 O
ATOM 5 O5' A A 50 -18.127 53.373 5.202 1.00 34.09 O
ATOM 6 C5' A A 50 -18.492 53.367 6.589 1.00 34.41 C
ATOM 7 C4' A A 50 -17.424 53.981 7.487 1.00 34.12 C
ATOM 8 O4' A A 50 -16.155 53.288 7.345 1.00 33.21 O
ATOM 9 C3' A A 50 -17.062 55.434 7.207 1.00 34.21 C
ATOM 10 O3' A A 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 11 C2' A A 50 -15.729 55.538 7.944 1.00 33.52 C
ATOM 12 O2' A A 50 -15.877 55.652 9.348 1.00 33.53 O
ATOM 13 C1' A A 50 -15.091 54.199 7.567 1.00 32.64 C
ATOM 14 N9 A A 50 -14.267 54.286 6.361 1.00 32.11 N
ATOM 15 C8 A A 50 -14.660 54.042 5.070 1.00 32.34 C
ATOM 16 N7 A A 50 -13.713 54.205 4.177 1.00 32.23 N
ATOM 17 C5 A A 50 -12.616 54.588 4.933 1.00 31.88 C
ATOM 18 C6 A A 50 -11.287 54.919 4.583 1.00 31.58 C
ATOM 19 N6 A A 50 -10.835 54.901 3.326 1.00 31.33 N
ATOM 20 N1 A A 50 -10.435 55.259 5.583 1.00 31.50 N
ATOM 21 C2 A A 50 -10.886 55.273 6.847 1.00 31.04 C
ATOM 22 N3 A A 50 -12.111 54.981 7.292 1.00 31.26 N
ATOM 23 C4 A A 50 -12.938 54.645 6.281 1.00 31.74 C
ATOM 24 P U A 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 25 OP1 U A 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 26 OP2 U A 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 27 O5' U A 51 -17.347 58.422 6.545 1.00 36.99 O
TER
ATOM 1 O3' G B 53 -11.890 57.586 11.980 1.00 32.45 O
ATOM 2 P G B 54 -10.514 57.849 12.756 1.00 31.72 P
ATOM 3 OP1 G B 54 -10.396 56.814 13.805 1.00 31.58 O
ATOM 4 OP2 G B 54 -10.450 59.276 13.133 1.00 32.21 O
ATOM 5 O5' G B 54 -9.397 57.615 11.635 1.00 31.93 O
ATOM 6 C5' G B 54 -9.113 56.307 11.157 1.00 32.01 C
ATOM 7 C4' G B 54 -8.150 56.356 9.990 1.00 32.37 C
ATOM 8 O4' G B 54 -8.678 57.187 8.926 1.00 32.99 O
ATOM 9 C3' G B 54 -6.806 56.986 10.295 1.00 32.54 C
ATOM 10 O3' G B 54 -5.979 56.075 10.982 1.00 33.47 O
ATOM 11 C2' G B 54 -6.316 57.289 8.887 1.00 32.79 C
ATOM 12 O2' G B 54 -5.824 56.168 8.183 1.00 32.75 O
ATOM 13 C1' G B 54 -7.600 57.804 8.241 1.00 33.28 C
ATOM 14 N9 G B 54 -7.709 59.262 8.338 1.00 33.53 N
ATOM 15 C8 G B 54 -8.584 59.986 9.114 1.00 33.51 C
ATOM 16 N7 G B 54 -8.439 61.276 8.998 1.00 33.86 N
ATOM 17 C5 G B 54 -7.398 61.423 8.091 1.00 33.88 C
ATOM 18 C6 G B 54 -6.791 62.596 7.569 1.00 33.89 C
ATOM 19 O6 G B 54 -7.066 63.777 7.817 1.00 33.78 O
ATOM 20 N1 G B 54 -5.763 62.303 6.671 1.00 33.88 N
ATOM 21 C2 G B 54 -5.367 61.032 6.319 1.00 33.60 C
ATOM 22 N2 G B 54 -4.358 60.939 5.442 1.00 33.49 N
ATOM 23 N3 G B 54 -5.930 59.926 6.797 1.00 33.57 N
ATOM 24 C4 G B 54 -6.936 60.192 7.674 1.00 33.73 C
ATOM 25 P G B 55 -4.957 56.593 12.101 1.00 33.60 P
ATOM 26 OP1 G B 55 -4.560 55.429 12.917 1.00 33.68 O
ATOM 27 OP2 G B 55 -5.527 57.778 12.776 1.00 33.83 O
ATOM 28 O5' G B 55 -3.713 57.067 11.215 1.00 34.50 O
TER
Atoms:
OP1: (-20.259,52.371,4.288)
OP2: (-18.154,52.560,2.854)
C3': (-17.062,55.434,7.207)
C1': (-15.091,54.199,7.567)
C5': (-18.492,53.367,6.589)
O4': (-16.155,53.288,7.345)
C8: (-14.660,54.042,5.070)
O2': (-15.877,55.652,9.348)
C6: (-11.287,54.919,4.583)
C5: (-12.616,54.588,4.933)
C4: (-12.938,54.645,6.281)
P: (-18.783,52.331,4.175)
C4': (-17.424,53.981,7.487)
C2': (-15.729,55.538,7.944)
C2: (-10.886,55.273,6.847)
N1: (-10.435,55.259,5.583)
N3: (-12.111,54.981,7.292)
N6: (-10.835,54.901,3.326)
N7: (-13.713,54.205,4.177)
N9: (-14.267,54.286,6.361)
O5': (-18.127,53.373,5.202)
O3': (-18.048,56.331,7.702)
OP2: (-18.154,52.560,2.854)
C3': (-17.062,55.434,7.207)
C1': (-15.091,54.199,7.567)
C5': (-18.492,53.367,6.589)
O4': (-16.155,53.288,7.345)
C8: (-14.660,54.042,5.070)
O2': (-15.877,55.652,9.348)
C6: (-11.287,54.919,4.583)
C5: (-12.616,54.588,4.933)
C4: (-12.938,54.645,6.281)
P: (-18.783,52.331,4.175)
C4': (-17.424,53.981,7.487)
C2': (-15.729,55.538,7.944)
C2: (-10.886,55.273,6.847)
N1: (-10.435,55.259,5.583)
N3: (-12.111,54.981,7.292)
N6: (-10.835,54.901,3.326)
N7: (-13.713,54.205,4.177)
N9: (-14.267,54.286,6.361)
O5': (-18.127,53.373,5.202)
O3': (-18.048,56.331,7.702)
OP1: (-10.396,56.814,13.805)
OP2: (-10.450,59.276,13.133)
C3': (-6.806,56.986,10.295)
C1': (-7.600,57.804,8.241)
C5': (-9.113,56.307,11.157)
O6: (-7.066,63.777,7.817)
O4': (-8.678,57.187,8.926)
C8: (-8.584,59.986,9.114)
C2: (-5.367,61.032,6.319)
C6: (-6.791,62.596,7.569)
C5: (-7.398,61.423,8.091)
C4: (-6.936,60.192,7.674)
P: (-10.514,57.849,12.756)
C4': (-8.150,56.356,9.990)
C2': (-6.316,57.289,8.887)
O2': (-5.824,56.168,8.183)
N1: (-5.763,62.303,6.671)
N2: (-4.358,60.939,5.442)
N3: (-5.930,59.926,6.797)
N7: (-8.439,61.276,8.998)
N9: (-7.709,59.262,8.338)
O5': (-9.397,57.615,11.635)
O3': (-5.979,56.075,10.982)
OP2: (-10.450,59.276,13.133)
C3': (-6.806,56.986,10.295)
C1': (-7.600,57.804,8.241)
C5': (-9.113,56.307,11.157)
O6: (-7.066,63.777,7.817)
O4': (-8.678,57.187,8.926)
C8: (-8.584,59.986,9.114)
C2: (-5.367,61.032,6.319)
C6: (-6.791,62.596,7.569)
C5: (-7.398,61.423,8.091)
C4: (-6.936,60.192,7.674)
P: (-10.514,57.849,12.756)
C4': (-8.150,56.356,9.990)
C2': (-6.316,57.289,8.887)
O2': (-5.824,56.168,8.183)
N1: (-5.763,62.303,6.671)
N2: (-4.358,60.939,5.442)
N3: (-5.930,59.926,6.797)
N7: (-8.439,61.276,8.998)
N9: (-7.709,59.262,8.338)
O5': (-9.397,57.615,11.635)
O3': (-5.979,56.075,10.982)
Image (generated by PyMOL):