Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1250:A1353
Extra
PDB:
ATOM 1 O3' A A1249 -95.310 116.759 37.256 1.00 67.94 O
ATOM 2 P A A1250 -95.700 115.250 36.888 1.00 66.29 P
ATOM 3 OP1 A A1250 -94.530 114.652 36.184 1.00 66.29 O
ATOM 4 OP2 A A1250 -97.009 115.298 36.193 1.00 66.29 O
ATOM 5 O5' A A1250 -95.889 114.574 38.313 1.00 66.29 O
ATOM 6 C5' A A1250 -94.818 113.929 38.976 1.00 66.29 C
ATOM 7 C4' A A1250 -95.294 113.299 40.251 1.00 66.29 C
ATOM 8 O4' A A1250 -96.122 114.241 40.980 1.00 66.29 O
ATOM 9 C3' A A1250 -96.185 112.089 40.076 1.00 66.29 C
ATOM 10 O3' A A1250 -95.443 110.906 39.841 1.00 66.29 O
ATOM 11 C2' A A1250 -96.986 112.066 41.369 1.00 66.29 C
ATOM 12 O2' A A1250 -96.256 111.449 42.411 1.00 66.29 O
ATOM 13 C1' A A1250 -97.129 113.552 41.685 1.00 66.29 C
ATOM 14 N9 A A1250 -98.443 114.059 41.272 1.00 65.75 N
ATOM 15 C8 A A1250 -98.828 114.573 40.064 1.00 65.75 C
ATOM 16 N7 A A1250 -100.099 114.889 40.023 1.00 65.75 N
ATOM 17 C5 A A1250 -100.580 114.544 41.281 1.00 65.75 C
ATOM 18 C6 A A1250 -101.857 114.626 41.873 1.00 65.75 C
ATOM 19 N6 A A1250 -102.921 115.101 41.226 1.00 65.75 N
ATOM 20 N1 A A1250 -102.008 114.202 43.149 1.00 65.75 N
ATOM 21 C2 A A1250 -100.928 113.721 43.775 1.00 65.75 C
ATOM 22 N3 A A1250 -99.680 113.593 43.321 1.00 65.75 N
ATOM 23 C4 A A1250 -99.568 114.026 42.055 1.00 65.75 C
ATOM 24 P G A1251 -96.189 109.541 39.444 1.00 44.64 P
ATOM 25 OP1 G A1251 -95.324 108.415 39.910 1.00 44.64 O
ATOM 26 OP2 G A1251 -96.521 109.638 37.998 1.00 44.64 O
ATOM 27 O5' G A1251 -97.523 109.609 40.322 1.00 44.64 O
TER
ATOM 1 O3' U B1352 -103.466 117.285 48.594 1.00 50.52 O
ATOM 2 P G B1353 -103.878 116.118 49.627 1.00 69.65 P
ATOM 3 OP1 G B1353 -105.357 115.931 49.523 1.00 69.65 O
ATOM 4 OP2 G B1353 -103.307 116.485 50.945 1.00 69.65 O
ATOM 5 O5' G B1353 -103.114 114.837 49.036 1.00 69.65 O
ATOM 6 C5' G B1353 -103.385 114.367 47.723 1.00 69.65 C
ATOM 7 C4' G B1353 -102.276 113.490 47.184 1.00 69.65 C
ATOM 8 O4' G B1353 -100.983 114.105 47.413 1.00 69.65 O
ATOM 9 C3' G B1353 -102.129 112.117 47.811 1.00 69.65 C
ATOM 10 O3' G B1353 -103.094 111.192 47.356 1.00 69.65 O
ATOM 11 C2' G B1353 -100.702 111.746 47.429 1.00 69.65 C
ATOM 12 O2' G B1353 -100.630 111.321 46.079 1.00 69.65 O
ATOM 13 C1' G B1353 -99.998 113.097 47.557 1.00 69.65 C
ATOM 14 N9 G B1353 -99.348 113.247 48.873 1.00 69.88 N
ATOM 15 C8 G B1353 -99.508 114.243 49.822 1.00 69.88 C
ATOM 16 N7 G B1353 -98.785 114.060 50.900 1.00 69.88 N
ATOM 17 C5 G B1353 -98.110 112.866 50.648 1.00 69.88 C
ATOM 18 C6 G B1353 -97.177 112.154 51.445 1.00 69.88 C
ATOM 19 O6 G B1353 -96.755 112.449 52.571 1.00 69.88 O
ATOM 20 N1 G B1353 -96.734 110.994 50.808 1.00 69.88 N
ATOM 21 C2 G B1353 -97.134 110.564 49.563 1.00 69.88 C
ATOM 22 N2 G B1353 -96.588 109.413 49.134 1.00 69.88 N
ATOM 23 N3 G B1353 -98.004 111.216 48.803 1.00 69.88 N
ATOM 24 C4 G B1353 -98.446 112.350 49.405 1.00 69.88 C
ATOM 25 P G B1354 -103.558 109.979 48.301 1.00 59.63 P
ATOM 26 OP1 G B1354 -104.569 109.212 47.549 1.00 59.63 O
ATOM 27 OP2 G B1354 -103.934 110.562 49.611 1.00 59.63 O
ATOM 28 O5' G B1354 -102.237 109.109 48.444 1.00 59.63 O
TER
ATOM 2 P A A1250 -95.700 115.250 36.888 1.00 66.29 P
ATOM 3 OP1 A A1250 -94.530 114.652 36.184 1.00 66.29 O
ATOM 4 OP2 A A1250 -97.009 115.298 36.193 1.00 66.29 O
ATOM 5 O5' A A1250 -95.889 114.574 38.313 1.00 66.29 O
ATOM 6 C5' A A1250 -94.818 113.929 38.976 1.00 66.29 C
ATOM 7 C4' A A1250 -95.294 113.299 40.251 1.00 66.29 C
ATOM 8 O4' A A1250 -96.122 114.241 40.980 1.00 66.29 O
ATOM 9 C3' A A1250 -96.185 112.089 40.076 1.00 66.29 C
ATOM 10 O3' A A1250 -95.443 110.906 39.841 1.00 66.29 O
ATOM 11 C2' A A1250 -96.986 112.066 41.369 1.00 66.29 C
ATOM 12 O2' A A1250 -96.256 111.449 42.411 1.00 66.29 O
ATOM 13 C1' A A1250 -97.129 113.552 41.685 1.00 66.29 C
ATOM 14 N9 A A1250 -98.443 114.059 41.272 1.00 65.75 N
ATOM 15 C8 A A1250 -98.828 114.573 40.064 1.00 65.75 C
ATOM 16 N7 A A1250 -100.099 114.889 40.023 1.00 65.75 N
ATOM 17 C5 A A1250 -100.580 114.544 41.281 1.00 65.75 C
ATOM 18 C6 A A1250 -101.857 114.626 41.873 1.00 65.75 C
ATOM 19 N6 A A1250 -102.921 115.101 41.226 1.00 65.75 N
ATOM 20 N1 A A1250 -102.008 114.202 43.149 1.00 65.75 N
ATOM 21 C2 A A1250 -100.928 113.721 43.775 1.00 65.75 C
ATOM 22 N3 A A1250 -99.680 113.593 43.321 1.00 65.75 N
ATOM 23 C4 A A1250 -99.568 114.026 42.055 1.00 65.75 C
ATOM 24 P G A1251 -96.189 109.541 39.444 1.00 44.64 P
ATOM 25 OP1 G A1251 -95.324 108.415 39.910 1.00 44.64 O
ATOM 26 OP2 G A1251 -96.521 109.638 37.998 1.00 44.64 O
ATOM 27 O5' G A1251 -97.523 109.609 40.322 1.00 44.64 O
TER
ATOM 1 O3' U B1352 -103.466 117.285 48.594 1.00 50.52 O
ATOM 2 P G B1353 -103.878 116.118 49.627 1.00 69.65 P
ATOM 3 OP1 G B1353 -105.357 115.931 49.523 1.00 69.65 O
ATOM 4 OP2 G B1353 -103.307 116.485 50.945 1.00 69.65 O
ATOM 5 O5' G B1353 -103.114 114.837 49.036 1.00 69.65 O
ATOM 6 C5' G B1353 -103.385 114.367 47.723 1.00 69.65 C
ATOM 7 C4' G B1353 -102.276 113.490 47.184 1.00 69.65 C
ATOM 8 O4' G B1353 -100.983 114.105 47.413 1.00 69.65 O
ATOM 9 C3' G B1353 -102.129 112.117 47.811 1.00 69.65 C
ATOM 10 O3' G B1353 -103.094 111.192 47.356 1.00 69.65 O
ATOM 11 C2' G B1353 -100.702 111.746 47.429 1.00 69.65 C
ATOM 12 O2' G B1353 -100.630 111.321 46.079 1.00 69.65 O
ATOM 13 C1' G B1353 -99.998 113.097 47.557 1.00 69.65 C
ATOM 14 N9 G B1353 -99.348 113.247 48.873 1.00 69.88 N
ATOM 15 C8 G B1353 -99.508 114.243 49.822 1.00 69.88 C
ATOM 16 N7 G B1353 -98.785 114.060 50.900 1.00 69.88 N
ATOM 17 C5 G B1353 -98.110 112.866 50.648 1.00 69.88 C
ATOM 18 C6 G B1353 -97.177 112.154 51.445 1.00 69.88 C
ATOM 19 O6 G B1353 -96.755 112.449 52.571 1.00 69.88 O
ATOM 20 N1 G B1353 -96.734 110.994 50.808 1.00 69.88 N
ATOM 21 C2 G B1353 -97.134 110.564 49.563 1.00 69.88 C
ATOM 22 N2 G B1353 -96.588 109.413 49.134 1.00 69.88 N
ATOM 23 N3 G B1353 -98.004 111.216 48.803 1.00 69.88 N
ATOM 24 C4 G B1353 -98.446 112.350 49.405 1.00 69.88 C
ATOM 25 P G B1354 -103.558 109.979 48.301 1.00 59.63 P
ATOM 26 OP1 G B1354 -104.569 109.212 47.549 1.00 59.63 O
ATOM 27 OP2 G B1354 -103.934 110.562 49.611 1.00 59.63 O
ATOM 28 O5' G B1354 -102.237 109.109 48.444 1.00 59.63 O
TER
Atoms:
OP1: (-94.530,114.652,36.184)
OP2: (-97.009,115.298,36.193)
C3': (-96.185,112.089,40.076)
C1': (-97.129,113.552,41.685)
C5': (-94.818,113.929,38.976)
O4': (-96.122,114.241,40.980)
C8: (-98.828,114.573,40.064)
O2': (-96.256,111.449,42.411)
C6: (-101.857,114.626,41.873)
C5: (-100.580,114.544,41.281)
C4: (-99.568,114.026,42.055)
P: (-95.700,115.250,36.888)
C4': (-95.294,113.299,40.251)
C2': (-96.986,112.066,41.369)
C2: (-100.928,113.721,43.775)
N1: (-102.008,114.202,43.149)
N3: (-99.680,113.593,43.321)
N6: (-102.921,115.101,41.226)
N7: (-100.099,114.889,40.023)
N9: (-98.443,114.059,41.272)
O5': (-95.889,114.574,38.313)
O3': (-95.443,110.906,39.841)
OP2: (-97.009,115.298,36.193)
C3': (-96.185,112.089,40.076)
C1': (-97.129,113.552,41.685)
C5': (-94.818,113.929,38.976)
O4': (-96.122,114.241,40.980)
C8: (-98.828,114.573,40.064)
O2': (-96.256,111.449,42.411)
C6: (-101.857,114.626,41.873)
C5: (-100.580,114.544,41.281)
C4: (-99.568,114.026,42.055)
P: (-95.700,115.250,36.888)
C4': (-95.294,113.299,40.251)
C2': (-96.986,112.066,41.369)
C2: (-100.928,113.721,43.775)
N1: (-102.008,114.202,43.149)
N3: (-99.680,113.593,43.321)
N6: (-102.921,115.101,41.226)
N7: (-100.099,114.889,40.023)
N9: (-98.443,114.059,41.272)
O5': (-95.889,114.574,38.313)
O3': (-95.443,110.906,39.841)
OP1: (-105.357,115.931,49.523)
OP2: (-103.307,116.485,50.945)
C3': (-102.129,112.117,47.811)
C1': (-99.998,113.097,47.557)
C5': (-103.385,114.367,47.723)
O6: (-96.755,112.449,52.571)
O4': (-100.983,114.105,47.413)
C8: (-99.508,114.243,49.822)
C2: (-97.134,110.564,49.563)
C6: (-97.177,112.154,51.445)
C5: (-98.110,112.866,50.648)
C4: (-98.446,112.350,49.405)
P: (-103.878,116.118,49.627)
C4': (-102.276,113.490,47.184)
C2': (-100.702,111.746,47.429)
O2': (-100.630,111.321,46.079)
N1: (-96.734,110.994,50.808)
N2: (-96.588,109.413,49.134)
N3: (-98.004,111.216,48.803)
N7: (-98.785,114.060,50.900)
N9: (-99.348,113.247,48.873)
O5': (-103.114,114.837,49.036)
O3': (-103.094,111.192,47.356)
OP2: (-103.307,116.485,50.945)
C3': (-102.129,112.117,47.811)
C1': (-99.998,113.097,47.557)
C5': (-103.385,114.367,47.723)
O6: (-96.755,112.449,52.571)
O4': (-100.983,114.105,47.413)
C8: (-99.508,114.243,49.822)
C2: (-97.134,110.564,49.563)
C6: (-97.177,112.154,51.445)
C5: (-98.110,112.866,50.648)
C4: (-98.446,112.350,49.405)
P: (-103.878,116.118,49.627)
C4': (-102.276,113.490,47.184)
C2': (-100.702,111.746,47.429)
O2': (-100.630,111.321,46.079)
N1: (-96.734,110.994,50.808)
N2: (-96.588,109.413,49.134)
N3: (-98.004,111.216,48.803)
N7: (-98.785,114.060,50.900)
N9: (-99.348,113.247,48.873)
O5': (-103.114,114.837,49.036)
O3': (-103.094,111.192,47.356)
Image (generated by PyMOL):