ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2660:2655

Extra

PDB:
ATOM 1 O3' G A 659 -112.248 62.182 79.072 1.00277.78 O
ATOM 2 P A A 660 -112.478 61.851 80.631 1.00284.37 P
ATOM 3 OP1 A A 660 -111.166 61.995 81.307 1.00283.52 O
ATOM 4 OP2 A A 660 -113.175 60.543 80.700 1.00284.36 O
ATOM 5 O5' A A 660 -113.460 63.013 81.104 1.00284.73 O
ATOM 6 C5' A A 660 -113.071 64.378 81.036 1.00284.88 C
ATOM 7 C4' A A 660 -114.214 65.293 81.407 1.00285.31 C
ATOM 8 O4' A A 660 -115.242 65.225 80.386 1.00286.25 O
ATOM 9 C3' A A 660 -114.938 64.958 82.704 1.00284.84 C
ATOM 10 O3' A A 660 -114.300 65.506 83.841 1.00284.08 O
ATOM 11 C2' A A 660 -116.340 65.511 82.477 1.00285.62 C
ATOM 12 O2' A A 660 -116.380 66.902 82.753 1.00285.75 O
ATOM 13 C1' A A 660 -116.522 65.308 80.973 1.00286.46 C
ATOM 14 N9 A A 660 -117.259 64.069 80.658 1.00286.68 N
ATOM 15 C8 A A 660 -116.723 62.859 80.295 1.00286.43 C
ATOM 16 N7 A A 660 -117.614 61.928 80.056 1.00286.74 N
ATOM 17 C5 A A 660 -118.824 62.568 80.274 1.00287.22 C
ATOM 18 C6 A A 660 -120.154 62.117 80.187 1.00287.72 C
ATOM 19 N6 A A 660 -120.495 60.871 79.842 1.00287.80 N
ATOM 20 N1 A A 660 -121.134 63.005 80.473 1.00288.12 N
ATOM 21 C2 A A 660 -120.786 64.254 80.814 1.00288.04 C
ATOM 22 N3 A A 660 -119.573 64.795 80.928 1.00287.60 N
ATOM 23 C4 A A 660 -118.622 63.889 80.643 1.00287.20 C
ATOM 24 P U A 661 -112.909 64.902 84.363 1.00239.88 P
ATOM 25 OP1 U A 661 -111.821 65.692 83.735 1.00239.94 O
ATOM 26 OP2 U A 661 -112.956 63.441 84.126 1.00239.74 O
ATOM 27 O5' U A 661 -112.968 65.206 85.921 1.00239.13 O
TER

ATOM 1 O3' G B 654 -126.273 61.491 82.632 1.00245.50 O
ATOM 2 P G B 655 -127.869 61.558 82.869 1.00331.30 P
ATOM 3 OP1 G B 655 -128.284 60.239 83.408 1.00330.94 O
ATOM 4 OP2 G B 655 -128.476 62.029 81.601 1.00332.32 O
ATOM 5 O5' G B 655 -128.037 62.677 83.997 1.00330.97 O
ATOM 6 C5' G B 655 -126.915 63.377 84.521 1.00330.37 C
ATOM 7 C4' G B 655 -126.708 64.700 83.826 1.00330.91 C
ATOM 8 O4' G B 655 -125.444 65.267 84.273 1.00330.28 O
ATOM 9 C3' G B 655 -126.598 64.609 82.306 1.00331.67 C
ATOM 10 O3' G B 655 -126.991 65.853 81.713 1.00332.38 O
ATOM 11 C2' G B 655 -125.105 64.406 82.122 1.00331.13 C
ATOM 12 O2' G B 655 -124.622 64.693 80.831 1.00331.69 O
ATOM 13 C1' G B 655 -124.560 65.369 83.170 1.00330.53 C
ATOM 14 N9 G B 655 -123.209 65.052 83.626 1.00329.69 N
ATOM 15 C8 G B 655 -122.738 63.891 84.189 1.00328.98 C
ATOM 16 N7 G B 655 -121.464 63.955 84.475 1.00328.33 N
ATOM 17 C5 G B 655 -121.078 65.231 84.075 1.00328.64 C
ATOM 18 C6 G B 655 -119.820 65.892 84.125 1.00328.23 C
ATOM 19 O6 G B 655 -118.737 65.473 84.553 1.00327.50 O
ATOM 20 N1 G B 655 -119.906 67.183 83.603 1.00328.79 N
ATOM 21 C2 G B 655 -121.042 67.772 83.098 1.00329.63 C
ATOM 22 N2 G B 655 -120.925 69.027 82.640 1.00330.07 N
ATOM 23 N3 G B 655 -122.213 67.168 83.048 1.00330.01 N
ATOM 24 C4 G B 655 -122.152 65.916 83.549 1.00329.47 C
ATOM 25 P U B 656 -127.562 65.887 80.206 1.00299.87 P
ATOM 26 OP1 U B 656 -128.947 66.412 80.275 1.00300.49 O
ATOM 27 OP2 U B 656 -127.345 64.537 79.629 1.00299.84 O
ATOM 28 O5' U B 656 -126.618 66.949 79.475 1.00300.09 O
TER

Atoms:
OP1: (-111.166,61.995,81.307)
OP2: (-113.175,60.543,80.700)
C3': (-114.938,64.958,82.704)
C1': (-116.522,65.308,80.973)
C5': (-113.071,64.378,81.036)
O4': (-115.242,65.225,80.386)
C8: (-116.723,62.859,80.295)
O2': (-116.380,66.902,82.753)
C6: (-120.154,62.117,80.187)
C5: (-118.824,62.568,80.274)
C4: (-118.622,63.889,80.643)
P: (-112.478,61.851,80.631)
C4': (-114.214,65.293,81.407)
C2': (-116.340,65.511,82.477)
C2: (-120.786,64.254,80.814)
N1: (-121.134,63.005,80.473)
N3: (-119.573,64.795,80.928)
N6: (-120.495,60.871,79.842)
N7: (-117.614,61.928,80.056)
N9: (-117.259,64.069,80.658)
O5': (-113.460,63.013,81.104)
O3': (-114.300,65.506,83.841)
OP1: (-128.284,60.239,83.408)
OP2: (-128.476,62.029,81.601)
C3': (-126.598,64.609,82.306)
C1': (-124.560,65.369,83.170)
C5': (-126.915,63.377,84.521)
O6: (-118.737,65.473,84.553)
O4': (-125.444,65.267,84.273)
C8: (-122.738,63.891,84.189)
C2: (-121.042,67.772,83.098)
C6: (-119.820,65.892,84.125)
C5: (-121.078,65.231,84.075)
C4: (-122.152,65.916,83.549)
P: (-127.869,61.558,82.869)
C4': (-126.708,64.700,83.826)
C2': (-125.105,64.406,82.122)
O2': (-124.622,64.693,80.831)
N1: (-119.906,67.183,83.603)
N2: (-120.925,69.027,82.640)
N3: (-122.213,67.168,83.048)
N7: (-121.464,63.955,84.475)
N9: (-123.209,65.052,83.626)
O5': (-128.037,62.677,83.997)
O3': (-126.991,65.853,81.713)
Image (generated by PyMOL):
PyMOL image
show in jmol