ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01937:01941

Extra

PDB:
ATOM 1 O3' C A1936 105.522 135.101 127.896 1.00 60.34 O
ATOM 2 P A A1937 104.500 135.780 128.928 1.00 58.49 P
ATOM 3 OP1 A A1937 105.117 137.039 129.407 1.00 59.57 O
ATOM 4 OP2 A A1937 104.057 134.763 129.906 1.00 58.39 O
ATOM 5 O5' A A1937 103.259 136.178 128.021 1.00 61.71 O
ATOM 6 C5' A A1937 103.369 137.183 126.985 1.00 62.05 C
ATOM 7 C4' A A1937 102.051 137.316 126.264 1.00 62.15 C
ATOM 8 O4' A A1937 101.810 136.122 125.474 1.00 63.23 O
ATOM 9 C3' A A1937 100.861 137.399 127.205 1.00 61.27 C
ATOM 10 O3' A A1937 100.628 138.722 127.642 1.00 58.35 O
ATOM 11 C2' A A1937 99.723 136.838 126.371 1.00 62.70 C
ATOM 12 O2' A A1937 99.179 137.788 125.478 1.00 62.05 O
ATOM 13 C1' A A1937 100.449 135.737 125.594 1.00 64.76 C
ATOM 14 N9 A A1937 100.411 134.432 126.253 1.00 66.89 N
ATOM 15 C8 A A1937 101.269 133.947 127.202 1.00 68.05 C
ATOM 16 N7 A A1937 101.004 132.723 127.580 1.00 69.93 N
ATOM 17 C5 A A1937 99.890 132.379 126.833 1.00 71.00 C
ATOM 18 C6 A A1937 99.126 131.200 126.760 1.00 72.87 C
ATOM 19 N6 A A1937 99.386 130.098 127.467 1.00 74.41 N
ATOM 20 N1 A A1937 98.073 131.189 125.919 1.00 73.15 N
ATOM 21 C2 A A1937 97.819 132.289 125.200 1.00 72.37 C
ATOM 22 N3 A A1937 98.467 133.449 125.174 1.00 70.52 N
ATOM 23 C4 A A1937 99.505 133.428 126.023 1.00 69.61 C
ATOM 24 P U A1938 99.904 138.969 129.046 1.00 58.96 P
ATOM 25 OP1 U A1938 99.787 140.437 129.250 1.00 57.14 O
ATOM 26 OP2 U A1938 100.586 138.129 130.065 1.00 59.71 O
ATOM 27 O5' U A1938 98.445 138.369 128.839 1.00 59.92 O
TER

ATOM 1 O3' A B1940 92.611 129.798 129.338 1.00 51.13 O
ATOM 2 P G B1941 93.812 129.647 128.292 1.00 51.60 P
ATOM 3 OP1 G B1941 93.883 128.206 127.933 1.00 51.57 O
ATOM 4 OP2 G B1941 95.011 130.332 128.839 1.00 52.25 O
ATOM 5 O5' G B1941 93.305 130.463 127.025 1.00 51.89 O
ATOM 6 C5' G B1941 92.095 130.083 126.365 1.00 49.95 C
ATOM 7 C4' G B1941 92.309 130.045 124.878 1.00 48.61 C
ATOM 8 O4' G B1941 92.305 131.405 124.377 1.00 49.42 O
ATOM 9 C3' G B1941 93.601 129.405 124.376 1.00 46.45 C
ATOM 10 O3' G B1941 93.329 128.712 123.169 1.00 42.80 O
ATOM 11 C2' G B1941 94.479 130.623 124.090 1.00 47.93 C
ATOM 12 O2' G B1941 95.416 130.395 123.067 1.00 51.03 O
ATOM 13 C1' G B1941 93.450 131.623 123.585 1.00 48.25 C
ATOM 14 N9 G B1941 93.811 133.030 123.709 1.00 48.82 N
ATOM 15 C8 G B1941 94.142 133.699 124.859 1.00 49.51 C
ATOM 16 N7 G B1941 94.348 134.973 124.668 1.00 50.40 N
ATOM 17 C5 G B1941 94.162 135.153 123.305 1.00 49.85 C
ATOM 18 C6 G B1941 94.255 136.322 122.513 1.00 49.98 C
ATOM 19 O6 G B1941 94.549 137.463 122.861 1.00 52.18 O
ATOM 20 N1 G B1941 93.976 136.063 121.184 1.00 49.80 N
ATOM 21 C2 G B1941 93.669 134.837 120.670 1.00 50.16 C
ATOM 22 N2 G B1941 93.458 134.799 119.346 1.00 50.60 N
ATOM 23 N3 G B1941 93.584 133.732 121.391 1.00 50.01 N
ATOM 24 C4 G B1941 93.840 133.963 122.695 1.00 49.93 C
ATOM 25 P U B1942 94.142 127.376 122.816 1.00 44.48 P
ATOM 26 OP1 U B1942 93.905 126.375 123.882 1.00 43.35 O
ATOM 27 OP2 U B1942 95.527 127.744 122.447 1.00 44.34 O
ATOM 28 O5' U B1942 93.471 126.851 121.474 1.00 45.19 O
TER

Atoms:
OP1: (105.117,137.039,129.407)
OP2: (104.057,134.763,129.906)
C3': (100.861,137.399,127.205)
C1': (100.449,135.737,125.594)
C5': (103.369,137.183,126.985)
O4': (101.810,136.122,125.474)
C8: (101.269,133.947,127.202)
O2': (99.179,137.788,125.478)
C6: (99.126,131.200,126.760)
C5: (99.890,132.379,126.833)
C4: (99.505,133.428,126.023)
P: (104.500,135.780,128.928)
C4': (102.051,137.316,126.264)
C2': (99.723,136.838,126.371)
C2: (97.819,132.289,125.200)
N1: (98.073,131.189,125.919)
N3: (98.467,133.449,125.174)
N6: (99.386,130.098,127.467)
N7: (101.004,132.723,127.580)
N9: (100.411,134.432,126.253)
O5': (103.259,136.178,128.021)
O3': (100.628,138.722,127.642)
OP1: (93.883,128.206,127.933)
OP2: (95.011,130.332,128.839)
C3': (93.601,129.405,124.376)
C1': (93.450,131.623,123.585)
C5': (92.095,130.083,126.365)
O6: (94.549,137.463,122.861)
O4': (92.305,131.405,124.377)
C8: (94.142,133.699,124.859)
C2: (93.669,134.837,120.670)
C6: (94.255,136.322,122.513)
C5: (94.162,135.153,123.305)
C4: (93.840,133.963,122.695)
P: (93.812,129.647,128.292)
C4': (92.309,130.045,124.878)
C2': (94.479,130.623,124.090)
O2': (95.416,130.395,123.067)
N1: (93.976,136.063,121.184)
N2: (93.458,134.799,119.346)
N3: (93.584,133.732,121.391)
N7: (94.348,134.973,124.668)
N9: (93.811,133.030,123.709)
O5': (93.305,130.463,127.025)
O3': (93.329,128.712,123.169)
Image (generated by PyMOL):
PyMOL image
show in jmol