ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A1223:A553

Extra

PDB:
ATOM 1 O3' C A1222 7.535 88.554 97.956 1.00 47.22 O
ATOM 2 P U A1223 7.180 88.731 96.406 1.00 47.94 P
ATOM 3 OP1 U A1223 6.269 87.618 96.013 1.00 47.75 O
ATOM 4 OP2 U A1223 8.445 88.924 95.668 1.00 46.69 O
ATOM 5 O5' U A1223 6.364 90.096 96.371 1.00 45.09 O
ATOM 6 C5' U A1223 5.140 90.214 97.096 1.00 45.64 C
ATOM 7 C4' U A1223 4.638 91.629 97.057 1.00 45.73 C
ATOM 8 O4' U A1223 5.508 92.494 97.822 1.00 45.66 O
ATOM 9 C3' U A1223 4.616 92.285 95.694 1.00 46.40 C
ATOM 10 O3' U A1223 3.524 91.837 94.905 1.00 49.24 O
ATOM 11 C2' U A1223 4.523 93.756 96.065 1.00 45.59 C
ATOM 12 O2' U A1223 3.234 94.176 96.425 1.00 42.26 O
ATOM 13 C1' U A1223 5.441 93.802 97.285 1.00 45.87 C
ATOM 14 N1 U A1223 6.790 94.219 96.894 1.00 48.60 N
ATOM 15 C2 U A1223 7.050 95.570 96.902 1.00 50.17 C
ATOM 16 O2 U A1223 6.224 96.398 97.228 1.00 50.46 O
ATOM 17 N3 U A1223 8.312 95.921 96.511 1.00 51.66 N
ATOM 18 C4 U A1223 9.319 95.081 96.113 1.00 52.39 C
ATOM 19 O4 U A1223 10.384 95.568 95.727 1.00 54.30 O
ATOM 20 C5 U A1223 8.979 93.682 96.141 1.00 51.41 C
ATOM 21 C6 U A1223 7.754 93.311 96.523 1.00 49.37 C
ATOM 22 P G A1224 3.615 91.912 93.303 1.00 52.02 P
ATOM 23 OP1 G A1224 2.662 90.905 92.757 1.00 49.20 O
ATOM 24 OP2 G A1224 5.045 91.833 92.919 1.00 53.66 O
ATOM 25 O5' G A1224 3.082 93.379 92.983 1.00 49.00 O
TER

ATOM 1 O3' G B 552 -5.701 94.363 97.063 1.00 64.05 O
ATOM 2 P A B 553 -5.192 93.446 98.284 1.00 62.93 P
ATOM 3 OP1 A B 553 -5.847 92.132 98.133 1.00 62.01 O
ATOM 4 OP2 A B 553 -5.299 94.174 99.565 1.00 62.01 O
ATOM 5 O5' A B 553 -3.646 93.225 97.966 1.00 63.50 O
ATOM 6 C5' A B 553 -3.235 92.438 96.823 1.00 63.46 C
ATOM 7 C4' A B 553 -1.730 92.473 96.673 1.00 62.13 C
ATOM 8 O4' A B 553 -1.301 93.783 96.217 1.00 61.78 O
ATOM 9 C3' A B 553 -0.938 92.245 97.949 1.00 61.31 C
ATOM 10 O3' A B 553 -0.805 90.863 98.225 1.00 59.82 O
ATOM 11 C2' A B 553 0.400 92.882 97.610 1.00 60.39 C
ATOM 12 O2' A B 553 1.167 92.040 96.771 1.00 60.10 O
ATOM 13 C1' A B 553 -0.047 94.100 96.797 1.00 59.71 C
ATOM 14 N9 A B 553 -0.191 95.355 97.537 1.00 56.77 N
ATOM 15 C8 A B 553 -1.354 95.940 97.961 1.00 56.08 C
ATOM 16 N7 A B 553 -1.181 97.098 98.551 1.00 56.97 N
ATOM 17 C5 A B 553 0.194 97.282 98.531 1.00 56.87 C
ATOM 18 C6 A B 553 1.026 98.330 99.001 1.00 56.74 C
ATOM 19 N6 A B 553 0.578 99.425 99.629 1.00 54.74 N
ATOM 20 N1 A B 553 2.353 98.203 98.804 1.00 56.82 N
ATOM 21 C2 A B 553 2.809 97.099 98.195 1.00 57.02 C
ATOM 22 N3 A B 553 2.137 96.053 97.721 1.00 56.37 N
ATOM 23 C4 A B 553 0.818 96.208 97.918 1.00 56.49 C
ATOM 24 P A B 554 -0.930 90.333 99.734 1.00 60.63 P
ATOM 25 OP1 A B 554 -1.122 88.857 99.601 1.00 58.59 O
ATOM 26 OP2 A B 554 -1.923 91.155 100.485 1.00 59.42 O
ATOM 27 O5' A B 554 0.493 90.622 100.388 1.00 59.17 O
TER

Atoms:
C4: (9.319,95.081,96.113)
N3: (8.312,95.921,96.511)
OP1: (6.269,87.618,96.013)
OP2: (8.445,88.924,95.668)
C2: (7.050,95.570,96.902)
C1': (5.441,93.802,97.285)
C3': (4.616,92.285,95.694)
O5': (6.364,90.096,96.371)
O4': (5.508,92.494,97.822)
C5': (5.140,90.214,97.096)
P: (7.180,88.731,96.406)
C4': (4.638,91.629,97.057)
C2': (4.523,93.756,96.065)
O2': (3.234,94.176,96.425)
N1: (6.790,94.219,96.894)
O4: (10.384,95.568,95.727)
O2: (6.224,96.398,97.228)
C6: (7.754,93.311,96.523)
C5: (8.979,93.682,96.141)
O3': (3.524,91.837,94.905)
OP1: (-5.847,92.132,98.133)
OP2: (-5.299,94.174,99.565)
C3': (-0.938,92.245,97.949)
C1': (-0.047,94.100,96.797)
C5': (-3.235,92.438,96.823)
O4': (-1.301,93.783,96.217)
C8: (-1.354,95.940,97.961)
O2': (1.167,92.040,96.771)
C6: (1.026,98.330,99.001)
C5: (0.194,97.282,98.531)
C4: (0.818,96.208,97.918)
P: (-5.192,93.446,98.284)
C4': (-1.730,92.473,96.673)
C2': (0.400,92.882,97.610)
C2: (2.809,97.099,98.195)
N1: (2.353,98.203,98.804)
N3: (2.137,96.053,97.721)
N6: (0.578,99.425,99.629)
N7: (-1.181,97.098,98.551)
N9: (-0.191,95.355,97.537)
O5': (-3.646,93.225,97.966)
O3': (-0.805,90.863,98.225)
Image (generated by PyMOL):
PyMOL image
show in jmol