Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A50:A54
Extra
PDB:
ATOM 1 O3' A A 49 -18.640 50.849 4.548 1.00 25.30 O
ATOM 2 P A A 50 -18.954 52.358 4.126 1.00 25.79 P
ATOM 3 OP1 A A 50 -20.418 52.552 4.225 1.00 25.77 O
ATOM 4 OP2 A A 50 -18.277 52.643 2.840 1.00 25.51 O
ATOM 5 O5' A A 50 -18.203 53.209 5.261 1.00 25.99 O
ATOM 6 C5' A A 50 -18.682 53.257 6.610 1.00 25.90 C
ATOM 7 C4' A A 50 -17.675 53.904 7.551 1.00 25.72 C
ATOM 8 O4' A A 50 -16.394 53.216 7.488 1.00 25.01 O
ATOM 9 C3' A A 50 -17.338 55.360 7.255 1.00 25.72 C
ATOM 10 O3' A A 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 11 C2' A A 50 -15.971 55.501 7.928 1.00 25.26 C
ATOM 12 O2' A A 50 -16.043 55.702 9.327 1.00 25.37 O
ATOM 13 C1' A A 50 -15.332 54.146 7.627 1.00 24.37 C
ATOM 14 N9 A A 50 -14.523 54.165 6.406 1.00 24.03 N
ATOM 15 C8 A A 50 -14.943 53.880 5.133 1.00 24.08 C
ATOM 16 N7 A A 50 -14.007 53.982 4.219 1.00 23.99 N
ATOM 17 C5 A A 50 -12.890 54.368 4.938 1.00 23.88 C
ATOM 18 C6 A A 50 -11.560 54.648 4.548 1.00 23.92 C
ATOM 19 N6 A A 50 -11.137 54.568 3.285 1.00 23.85 N
ATOM 20 N1 A A 50 -10.678 55.006 5.511 1.00 23.73 N
ATOM 21 C2 A A 50 -11.108 55.081 6.782 1.00 23.36 C
ATOM 22 N3 A A 50 -12.332 54.843 7.266 1.00 23.20 N
ATOM 23 C4 A A 50 -13.187 54.487 6.288 1.00 23.67 C
ATOM 24 P U A 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 25 OP1 U A 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 26 OP2 U A 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 27 O5' U A 51 -18.057 58.336 6.496 1.00 28.07 O
TER
ATOM 1 O3' G B 53 -12.153 57.397 12.018 1.00 25.33 O
ATOM 2 P G B 54 -10.769 57.720 12.755 1.00 24.35 P
ATOM 3 OP1 G B 54 -10.579 56.693 13.802 1.00 24.83 O
ATOM 4 OP2 G B 54 -10.733 59.154 13.121 1.00 24.90 O
ATOM 5 O5' G B 54 -9.693 57.486 11.606 1.00 24.61 O
ATOM 6 C5' G B 54 -9.448 56.164 11.152 1.00 25.05 C
ATOM 7 C4' G B 54 -8.522 56.192 9.960 1.00 25.37 C
ATOM 8 O4' G B 54 -9.057 57.028 8.904 1.00 25.24 O
ATOM 9 C3' G B 54 -7.169 56.808 10.246 1.00 25.59 C
ATOM 10 O3' G B 54 -6.363 55.897 10.964 1.00 26.25 O
ATOM 11 C2' G B 54 -6.697 57.067 8.821 1.00 25.69 C
ATOM 12 O2' G B 54 -6.292 55.899 8.134 1.00 25.43 O
ATOM 13 C1' G B 54 -7.978 57.631 8.210 1.00 25.96 C
ATOM 14 N9 G B 54 -8.082 59.086 8.325 1.00 26.22 N
ATOM 15 C8 G B 54 -8.963 59.797 9.104 1.00 26.57 C
ATOM 16 N7 G B 54 -8.830 61.092 9.007 1.00 26.73 N
ATOM 17 C5 G B 54 -7.788 61.256 8.107 1.00 26.62 C
ATOM 18 C6 G B 54 -7.191 62.443 7.609 1.00 26.36 C
ATOM 19 O6 G B 54 -7.487 63.614 7.886 1.00 26.25 O
ATOM 20 N1 G B 54 -6.159 62.171 6.705 1.00 26.35 N
ATOM 21 C2 G B 54 -5.756 60.903 6.336 1.00 26.45 C
ATOM 22 N2 G B 54 -4.745 60.814 5.463 1.00 26.36 N
ATOM 23 N3 G B 54 -6.308 59.786 6.798 1.00 26.64 N
ATOM 24 C4 G B 54 -7.317 60.031 7.675 1.00 26.61 C
ATOM 25 P G B 55 -5.251 56.425 11.986 1.00 26.49 P
ATOM 26 OP1 G B 55 -4.789 55.268 12.783 1.00 26.35 O
ATOM 27 OP2 G B 55 -5.763 57.634 12.671 1.00 26.33 O
ATOM 28 O5' G B 55 -4.075 56.868 10.999 1.00 27.11 O
TER
ATOM 2 P A A 50 -18.954 52.358 4.126 1.00 25.79 P
ATOM 3 OP1 A A 50 -20.418 52.552 4.225 1.00 25.77 O
ATOM 4 OP2 A A 50 -18.277 52.643 2.840 1.00 25.51 O
ATOM 5 O5' A A 50 -18.203 53.209 5.261 1.00 25.99 O
ATOM 6 C5' A A 50 -18.682 53.257 6.610 1.00 25.90 C
ATOM 7 C4' A A 50 -17.675 53.904 7.551 1.00 25.72 C
ATOM 8 O4' A A 50 -16.394 53.216 7.488 1.00 25.01 O
ATOM 9 C3' A A 50 -17.338 55.360 7.255 1.00 25.72 C
ATOM 10 O3' A A 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 11 C2' A A 50 -15.971 55.501 7.928 1.00 25.26 C
ATOM 12 O2' A A 50 -16.043 55.702 9.327 1.00 25.37 O
ATOM 13 C1' A A 50 -15.332 54.146 7.627 1.00 24.37 C
ATOM 14 N9 A A 50 -14.523 54.165 6.406 1.00 24.03 N
ATOM 15 C8 A A 50 -14.943 53.880 5.133 1.00 24.08 C
ATOM 16 N7 A A 50 -14.007 53.982 4.219 1.00 23.99 N
ATOM 17 C5 A A 50 -12.890 54.368 4.938 1.00 23.88 C
ATOM 18 C6 A A 50 -11.560 54.648 4.548 1.00 23.92 C
ATOM 19 N6 A A 50 -11.137 54.568 3.285 1.00 23.85 N
ATOM 20 N1 A A 50 -10.678 55.006 5.511 1.00 23.73 N
ATOM 21 C2 A A 50 -11.108 55.081 6.782 1.00 23.36 C
ATOM 22 N3 A A 50 -12.332 54.843 7.266 1.00 23.20 N
ATOM 23 C4 A A 50 -13.187 54.487 6.288 1.00 23.67 C
ATOM 24 P U A 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 25 OP1 U A 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 26 OP2 U A 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 27 O5' U A 51 -18.057 58.336 6.496 1.00 28.07 O
TER
ATOM 1 O3' G B 53 -12.153 57.397 12.018 1.00 25.33 O
ATOM 2 P G B 54 -10.769 57.720 12.755 1.00 24.35 P
ATOM 3 OP1 G B 54 -10.579 56.693 13.802 1.00 24.83 O
ATOM 4 OP2 G B 54 -10.733 59.154 13.121 1.00 24.90 O
ATOM 5 O5' G B 54 -9.693 57.486 11.606 1.00 24.61 O
ATOM 6 C5' G B 54 -9.448 56.164 11.152 1.00 25.05 C
ATOM 7 C4' G B 54 -8.522 56.192 9.960 1.00 25.37 C
ATOM 8 O4' G B 54 -9.057 57.028 8.904 1.00 25.24 O
ATOM 9 C3' G B 54 -7.169 56.808 10.246 1.00 25.59 C
ATOM 10 O3' G B 54 -6.363 55.897 10.964 1.00 26.25 O
ATOM 11 C2' G B 54 -6.697 57.067 8.821 1.00 25.69 C
ATOM 12 O2' G B 54 -6.292 55.899 8.134 1.00 25.43 O
ATOM 13 C1' G B 54 -7.978 57.631 8.210 1.00 25.96 C
ATOM 14 N9 G B 54 -8.082 59.086 8.325 1.00 26.22 N
ATOM 15 C8 G B 54 -8.963 59.797 9.104 1.00 26.57 C
ATOM 16 N7 G B 54 -8.830 61.092 9.007 1.00 26.73 N
ATOM 17 C5 G B 54 -7.788 61.256 8.107 1.00 26.62 C
ATOM 18 C6 G B 54 -7.191 62.443 7.609 1.00 26.36 C
ATOM 19 O6 G B 54 -7.487 63.614 7.886 1.00 26.25 O
ATOM 20 N1 G B 54 -6.159 62.171 6.705 1.00 26.35 N
ATOM 21 C2 G B 54 -5.756 60.903 6.336 1.00 26.45 C
ATOM 22 N2 G B 54 -4.745 60.814 5.463 1.00 26.36 N
ATOM 23 N3 G B 54 -6.308 59.786 6.798 1.00 26.64 N
ATOM 24 C4 G B 54 -7.317 60.031 7.675 1.00 26.61 C
ATOM 25 P G B 55 -5.251 56.425 11.986 1.00 26.49 P
ATOM 26 OP1 G B 55 -4.789 55.268 12.783 1.00 26.35 O
ATOM 27 OP2 G B 55 -5.763 57.634 12.671 1.00 26.33 O
ATOM 28 O5' G B 55 -4.075 56.868 10.999 1.00 27.11 O
TER
Atoms:
OP1: (-20.418,52.552,4.225)
OP2: (-18.277,52.643,2.840)
C3': (-17.338,55.360,7.255)
C1': (-15.332,54.146,7.627)
C5': (-18.682,53.257,6.610)
O4': (-16.394,53.216,7.488)
C8: (-14.943,53.880,5.133)
O2': (-16.043,55.702,9.327)
C6: (-11.560,54.648,4.548)
C5: (-12.890,54.368,4.938)
C4: (-13.187,54.487,6.288)
P: (-18.954,52.358,4.126)
C4': (-17.675,53.904,7.551)
C2': (-15.971,55.501,7.928)
C2: (-11.108,55.081,6.782)
N1: (-10.678,55.006,5.511)
N3: (-12.332,54.843,7.266)
N6: (-11.137,54.568,3.285)
N7: (-14.007,53.982,4.219)
N9: (-14.523,54.165,6.406)
O5': (-18.203,53.209,5.261)
O3': (-18.324,56.228,7.799)
OP2: (-18.277,52.643,2.840)
C3': (-17.338,55.360,7.255)
C1': (-15.332,54.146,7.627)
C5': (-18.682,53.257,6.610)
O4': (-16.394,53.216,7.488)
C8: (-14.943,53.880,5.133)
O2': (-16.043,55.702,9.327)
C6: (-11.560,54.648,4.548)
C5: (-12.890,54.368,4.938)
C4: (-13.187,54.487,6.288)
P: (-18.954,52.358,4.126)
C4': (-17.675,53.904,7.551)
C2': (-15.971,55.501,7.928)
C2: (-11.108,55.081,6.782)
N1: (-10.678,55.006,5.511)
N3: (-12.332,54.843,7.266)
N6: (-11.137,54.568,3.285)
N7: (-14.007,53.982,4.219)
N9: (-14.523,54.165,6.406)
O5': (-18.203,53.209,5.261)
O3': (-18.324,56.228,7.799)
OP1: (-10.579,56.693,13.802)
OP2: (-10.733,59.154,13.121)
C3': (-7.169,56.808,10.246)
C1': (-7.978,57.631,8.210)
C5': (-9.448,56.164,11.152)
O6: (-7.487,63.614,7.886)
O4': (-9.057,57.028,8.904)
C8: (-8.963,59.797,9.104)
C2: (-5.756,60.903,6.336)
C6: (-7.191,62.443,7.609)
C5: (-7.788,61.256,8.107)
C4: (-7.317,60.031,7.675)
P: (-10.769,57.720,12.755)
C4': (-8.522,56.192,9.960)
C2': (-6.697,57.067,8.821)
O2': (-6.292,55.899,8.134)
N1: (-6.159,62.171,6.705)
N2: (-4.745,60.814,5.463)
N3: (-6.308,59.786,6.798)
N7: (-8.830,61.092,9.007)
N9: (-8.082,59.086,8.325)
O5': (-9.693,57.486,11.606)
O3': (-6.363,55.897,10.964)
OP2: (-10.733,59.154,13.121)
C3': (-7.169,56.808,10.246)
C1': (-7.978,57.631,8.210)
C5': (-9.448,56.164,11.152)
O6: (-7.487,63.614,7.886)
O4': (-9.057,57.028,8.904)
C8: (-8.963,59.797,9.104)
C2: (-5.756,60.903,6.336)
C6: (-7.191,62.443,7.609)
C5: (-7.788,61.256,8.107)
C4: (-7.317,60.031,7.675)
P: (-10.769,57.720,12.755)
C4': (-8.522,56.192,9.960)
C2': (-6.697,57.067,8.821)
O2': (-6.292,55.899,8.134)
N1: (-6.159,62.171,6.705)
N2: (-4.745,60.814,5.463)
N3: (-6.308,59.786,6.798)
N7: (-8.830,61.092,9.007)
N9: (-8.082,59.086,8.325)
O5': (-9.693,57.486,11.606)
O3': (-6.363,55.897,10.964)
Image (generated by PyMOL):