Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A50:A54
Extra
PDB:
ATOM 1 O3' A A 49 -18.606 50.857 4.911 1.00 42.57 O
ATOM 2 P A A 50 -19.023 52.354 4.530 1.00 43.67 P
ATOM 3 OP1 A A 50 -20.472 52.460 4.819 1.00 43.95 O
ATOM 4 OP2 A A 50 -18.515 52.670 3.172 1.00 43.00 O
ATOM 5 O5' A A 50 -18.202 53.251 5.576 1.00 43.37 O
ATOM 6 C5' A A 50 -18.601 53.319 6.948 1.00 42.77 C
ATOM 7 C4' A A 50 -17.536 53.980 7.808 1.00 42.23 C
ATOM 8 O4' A A 50 -16.271 53.280 7.666 1.00 41.22 O
ATOM 9 C3' A A 50 -17.207 55.421 7.443 1.00 42.33 C
ATOM 10 O3' A A 50 -18.158 56.334 8.007 1.00 43.73 O
ATOM 11 C2' A A 50 -15.809 55.567 8.039 1.00 41.17 C
ATOM 12 O2' A A 50 -15.837 55.822 9.429 1.00 41.33 O
ATOM 13 C1' A A 50 -15.195 54.198 7.738 1.00 39.92 C
ATOM 14 N9 A A 50 -14.455 54.195 6.473 1.00 38.75 N
ATOM 15 C8 A A 50 -14.929 53.839 5.240 1.00 38.17 C
ATOM 16 N7 A A 50 -14.048 53.949 4.275 1.00 37.82 N
ATOM 17 C5 A A 50 -12.914 54.417 4.911 1.00 37.76 C
ATOM 18 C6 A A 50 -11.620 54.745 4.440 1.00 37.89 C
ATOM 19 N6 A A 50 -11.249 54.639 3.159 1.00 38.15 N
ATOM 20 N1 A A 50 -10.711 55.187 5.339 1.00 37.91 N
ATOM 21 C2 A A 50 -11.076 55.291 6.627 1.00 37.94 C
ATOM 22 N3 A A 50 -12.260 55.013 7.182 1.00 38.03 N
ATOM 23 C4 A A 50 -13.146 54.576 6.266 1.00 38.02 C
ATOM 24 P U A 51 -18.866 57.448 7.088 1.00 44.41 P
ATOM 25 OP1 U A 51 -19.917 58.092 7.911 1.00 44.16 O
ATOM 26 OP2 U A 51 -19.222 56.836 5.786 1.00 43.99 O
ATOM 27 O5' U A 51 -17.683 58.493 6.819 1.00 44.75 O
TER
ATOM 1 O3' G B 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 2 P G B 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 3 OP1 G B 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 4 OP2 G B 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 5 O5' G B 54 -9.584 57.466 11.788 1.00 45.97 O
ATOM 6 C5' G B 54 -9.457 56.184 11.191 1.00 45.90 C
ATOM 7 C4' G B 54 -8.558 56.252 9.977 1.00 45.86 C
ATOM 8 O4' G B 54 -9.078 57.175 8.989 1.00 45.99 O
ATOM 9 C3' G B 54 -7.180 56.814 10.255 1.00 46.14 C
ATOM 10 O3' G B 54 -6.386 55.879 10.985 1.00 46.47 O
ATOM 11 C2' G B 54 -6.724 57.091 8.822 1.00 46.20 C
ATOM 12 O2' G B 54 -6.368 55.944 8.071 1.00 46.10 O
ATOM 13 C1' G B 54 -7.995 57.720 8.249 1.00 46.12 C
ATOM 14 N9 G B 54 -7.986 59.184 8.339 1.00 45.89 N
ATOM 15 C8 G B 54 -8.776 59.982 9.133 1.00 45.81 C
ATOM 16 N7 G B 54 -8.533 61.258 9.007 1.00 45.73 N
ATOM 17 C5 G B 54 -7.512 61.316 8.069 1.00 45.87 C
ATOM 18 C6 G B 54 -6.829 62.434 7.524 1.00 46.05 C
ATOM 19 O6 G B 54 -7.008 63.633 7.780 1.00 46.36 O
ATOM 20 N1 G B 54 -5.854 62.059 6.595 1.00 45.82 N
ATOM 21 C2 G B 54 -5.574 60.757 6.241 1.00 45.60 C
ATOM 22 N2 G B 54 -4.605 60.572 5.336 1.00 45.49 N
ATOM 23 N3 G B 54 -6.207 59.703 6.743 1.00 45.88 N
ATOM 24 C4 G B 54 -7.162 60.049 7.648 1.00 45.91 C
ATOM 25 P G B 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 26 OP1 G B 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 27 OP2 G B 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 28 O5' G B 55 -4.111 56.862 11.161 1.00 46.23 O
TER
ATOM 2 P A A 50 -19.023 52.354 4.530 1.00 43.67 P
ATOM 3 OP1 A A 50 -20.472 52.460 4.819 1.00 43.95 O
ATOM 4 OP2 A A 50 -18.515 52.670 3.172 1.00 43.00 O
ATOM 5 O5' A A 50 -18.202 53.251 5.576 1.00 43.37 O
ATOM 6 C5' A A 50 -18.601 53.319 6.948 1.00 42.77 C
ATOM 7 C4' A A 50 -17.536 53.980 7.808 1.00 42.23 C
ATOM 8 O4' A A 50 -16.271 53.280 7.666 1.00 41.22 O
ATOM 9 C3' A A 50 -17.207 55.421 7.443 1.00 42.33 C
ATOM 10 O3' A A 50 -18.158 56.334 8.007 1.00 43.73 O
ATOM 11 C2' A A 50 -15.809 55.567 8.039 1.00 41.17 C
ATOM 12 O2' A A 50 -15.837 55.822 9.429 1.00 41.33 O
ATOM 13 C1' A A 50 -15.195 54.198 7.738 1.00 39.92 C
ATOM 14 N9 A A 50 -14.455 54.195 6.473 1.00 38.75 N
ATOM 15 C8 A A 50 -14.929 53.839 5.240 1.00 38.17 C
ATOM 16 N7 A A 50 -14.048 53.949 4.275 1.00 37.82 N
ATOM 17 C5 A A 50 -12.914 54.417 4.911 1.00 37.76 C
ATOM 18 C6 A A 50 -11.620 54.745 4.440 1.00 37.89 C
ATOM 19 N6 A A 50 -11.249 54.639 3.159 1.00 38.15 N
ATOM 20 N1 A A 50 -10.711 55.187 5.339 1.00 37.91 N
ATOM 21 C2 A A 50 -11.076 55.291 6.627 1.00 37.94 C
ATOM 22 N3 A A 50 -12.260 55.013 7.182 1.00 38.03 N
ATOM 23 C4 A A 50 -13.146 54.576 6.266 1.00 38.02 C
ATOM 24 P U A 51 -18.866 57.448 7.088 1.00 44.41 P
ATOM 25 OP1 U A 51 -19.917 58.092 7.911 1.00 44.16 O
ATOM 26 OP2 U A 51 -19.222 56.836 5.786 1.00 43.99 O
ATOM 27 O5' U A 51 -17.683 58.493 6.819 1.00 44.75 O
TER
ATOM 1 O3' G B 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 2 P G B 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 3 OP1 G B 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 4 OP2 G B 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 5 O5' G B 54 -9.584 57.466 11.788 1.00 45.97 O
ATOM 6 C5' G B 54 -9.457 56.184 11.191 1.00 45.90 C
ATOM 7 C4' G B 54 -8.558 56.252 9.977 1.00 45.86 C
ATOM 8 O4' G B 54 -9.078 57.175 8.989 1.00 45.99 O
ATOM 9 C3' G B 54 -7.180 56.814 10.255 1.00 46.14 C
ATOM 10 O3' G B 54 -6.386 55.879 10.985 1.00 46.47 O
ATOM 11 C2' G B 54 -6.724 57.091 8.822 1.00 46.20 C
ATOM 12 O2' G B 54 -6.368 55.944 8.071 1.00 46.10 O
ATOM 13 C1' G B 54 -7.995 57.720 8.249 1.00 46.12 C
ATOM 14 N9 G B 54 -7.986 59.184 8.339 1.00 45.89 N
ATOM 15 C8 G B 54 -8.776 59.982 9.133 1.00 45.81 C
ATOM 16 N7 G B 54 -8.533 61.258 9.007 1.00 45.73 N
ATOM 17 C5 G B 54 -7.512 61.316 8.069 1.00 45.87 C
ATOM 18 C6 G B 54 -6.829 62.434 7.524 1.00 46.05 C
ATOM 19 O6 G B 54 -7.008 63.633 7.780 1.00 46.36 O
ATOM 20 N1 G B 54 -5.854 62.059 6.595 1.00 45.82 N
ATOM 21 C2 G B 54 -5.574 60.757 6.241 1.00 45.60 C
ATOM 22 N2 G B 54 -4.605 60.572 5.336 1.00 45.49 N
ATOM 23 N3 G B 54 -6.207 59.703 6.743 1.00 45.88 N
ATOM 24 C4 G B 54 -7.162 60.049 7.648 1.00 45.91 C
ATOM 25 P G B 55 -5.326 56.379 12.081 1.00 46.26 P
ATOM 26 OP1 G B 55 -4.890 55.200 12.859 1.00 46.48 O
ATOM 27 OP2 G B 55 -5.881 57.548 12.800 1.00 45.91 O
ATOM 28 O5' G B 55 -4.111 56.862 11.161 1.00 46.23 O
TER
Atoms:
OP1: (-20.472,52.460,4.819)
OP2: (-18.515,52.670,3.172)
C3': (-17.207,55.421,7.443)
C1': (-15.195,54.198,7.738)
C5': (-18.601,53.319,6.948)
O4': (-16.271,53.280,7.666)
C8: (-14.929,53.839,5.240)
O2': (-15.837,55.822,9.429)
C6: (-11.620,54.745,4.440)
C5: (-12.914,54.417,4.911)
C4: (-13.146,54.576,6.266)
P: (-19.023,52.354,4.530)
C4': (-17.536,53.980,7.808)
C2': (-15.809,55.567,8.039)
C2: (-11.076,55.291,6.627)
N1: (-10.711,55.187,5.339)
N3: (-12.260,55.013,7.182)
N6: (-11.249,54.639,3.159)
N7: (-14.048,53.949,4.275)
N9: (-14.455,54.195,6.473)
O5': (-18.202,53.251,5.576)
O3': (-18.158,56.334,8.007)
OP2: (-18.515,52.670,3.172)
C3': (-17.207,55.421,7.443)
C1': (-15.195,54.198,7.738)
C5': (-18.601,53.319,6.948)
O4': (-16.271,53.280,7.666)
C8: (-14.929,53.839,5.240)
O2': (-15.837,55.822,9.429)
C6: (-11.620,54.745,4.440)
C5: (-12.914,54.417,4.911)
C4: (-13.146,54.576,6.266)
P: (-19.023,52.354,4.530)
C4': (-17.536,53.980,7.808)
C2': (-15.809,55.567,8.039)
C2: (-11.076,55.291,6.627)
N1: (-10.711,55.187,5.339)
N3: (-12.260,55.013,7.182)
N6: (-11.249,54.639,3.159)
N7: (-14.048,53.949,4.275)
N9: (-14.455,54.195,6.473)
O5': (-18.202,53.251,5.576)
O3': (-18.158,56.334,8.007)
OP1: (-10.646,56.701,13.915)
OP2: (-10.701,59.166,13.214)
C3': (-7.180,56.814,10.255)
C1': (-7.995,57.720,8.249)
C5': (-9.457,56.184,11.191)
O6: (-7.008,63.633,7.780)
O4': (-9.078,57.175,8.989)
C8: (-8.776,59.982,9.133)
C2: (-5.574,60.757,6.241)
C6: (-6.829,62.434,7.524)
C5: (-7.512,61.316,8.069)
C4: (-7.162,60.049,7.648)
P: (-10.741,57.730,12.856)
C4': (-8.558,56.252,9.977)
C2': (-6.724,57.091,8.822)
O2': (-6.368,55.944,8.071)
N1: (-5.854,62.059,6.595)
N2: (-4.605,60.572,5.336)
N3: (-6.207,59.703,6.743)
N7: (-8.533,61.258,9.007)
N9: (-7.986,59.184,8.339)
O5': (-9.584,57.466,11.788)
O3': (-6.386,55.879,10.985)
OP2: (-10.701,59.166,13.214)
C3': (-7.180,56.814,10.255)
C1': (-7.995,57.720,8.249)
C5': (-9.457,56.184,11.191)
O6: (-7.008,63.633,7.780)
O4': (-9.078,57.175,8.989)
C8: (-8.776,59.982,9.133)
C2: (-5.574,60.757,6.241)
C6: (-6.829,62.434,7.524)
C5: (-7.512,61.316,8.069)
C4: (-7.162,60.049,7.648)
P: (-10.741,57.730,12.856)
C4': (-8.558,56.252,9.977)
C2': (-6.724,57.091,8.822)
O2': (-6.368,55.944,8.071)
N1: (-5.854,62.059,6.595)
N2: (-4.605,60.572,5.336)
N3: (-6.207,59.703,6.743)
N7: (-8.533,61.258,9.007)
N9: (-7.986,59.184,8.339)
O5': (-9.584,57.466,11.788)
O3': (-6.386,55.879,10.985)
Image (generated by PyMOL):