Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A102:A85
Extra
PDB:
ATOM 1 O3' U A 101 -12.504 -85.325 67.892 1.00 48.87 O
ATOM 2 P A A 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A A 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A A 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A A 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A A 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A A 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A A 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A A 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A A 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A A 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A A 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A A 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A A 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A A 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A A 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A A 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A A 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A A 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A A 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A A 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A A 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A A 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A A 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A A 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A A 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A A 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
ATOM 1 O3' G B 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 2 P G B 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 3 OP1 G B 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 4 OP2 G B 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 5 O5' G B 85 -20.407 -91.988 57.202 1.00 9.10 O
ATOM 6 C5' G B 85 -20.768 -90.643 57.488 1.00 9.10 C
ATOM 7 C4' G B 85 -19.554 -89.801 57.730 1.00 9.10 C
ATOM 8 O4' G B 85 -18.403 -90.657 57.900 1.00 9.10 O
ATOM 9 C3' G B 85 -19.132 -88.898 56.596 1.00 9.10 C
ATOM 10 O3' G B 85 -19.939 -87.747 56.480 1.00 9.10 O
ATOM 11 C2' G B 85 -17.661 -88.622 56.932 1.00 9.10 C
ATOM 12 O2' G B 85 -17.523 -87.658 57.971 1.00 9.10 O
ATOM 13 C1' G B 85 -17.233 -89.971 57.494 1.00 9.10 C
ATOM 14 N9 G B 85 -16.522 -90.787 56.501 1.00 9.03 N
ATOM 15 C8 G B 85 -16.817 -92.067 56.092 1.00 9.03 C
ATOM 16 N7 G B 85 -15.962 -92.485 55.199 1.00 9.03 N
ATOM 17 C5 G B 85 -15.072 -91.428 55.047 1.00 9.03 C
ATOM 18 C6 G B 85 -13.941 -91.293 54.235 1.00 9.03 C
ATOM 19 O6 G B 85 -13.462 -92.095 53.433 1.00 9.03 O
ATOM 20 N1 G B 85 -13.346 -90.067 54.394 1.00 9.03 N
ATOM 21 C2 G B 85 -13.772 -89.097 55.214 1.00 9.03 C
ATOM 22 N2 G B 85 -13.030 -87.996 55.192 1.00 9.03 N
ATOM 23 N3 G B 85 -14.812 -89.204 55.986 1.00 9.03 N
ATOM 24 C4 G B 85 -15.401 -90.382 55.843 1.00 9.03 C
ATOM 25 P U B 86 -20.528 -87.326 55.048 1.00 0.08 P
ATOM 26 OP1 U B 86 -21.884 -86.749 55.283 1.00 0.08 O
ATOM 27 OP2 U B 86 -20.395 -88.502 54.148 1.00 0.08 O
ATOM 28 O5' U B 86 -19.527 -86.195 54.607 1.00 0.08 O
TER
ATOM 2 P A A 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A A 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A A 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A A 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A A 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A A 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A A 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A A 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A A 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A A 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A A 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A A 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A A 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A A 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A A 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A A 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A A 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A A 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A A 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A A 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A A 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A A 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A A 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A A 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A A 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A A 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
ATOM 1 O3' G B 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 2 P G B 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 3 OP1 G B 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 4 OP2 G B 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 5 O5' G B 85 -20.407 -91.988 57.202 1.00 9.10 O
ATOM 6 C5' G B 85 -20.768 -90.643 57.488 1.00 9.10 C
ATOM 7 C4' G B 85 -19.554 -89.801 57.730 1.00 9.10 C
ATOM 8 O4' G B 85 -18.403 -90.657 57.900 1.00 9.10 O
ATOM 9 C3' G B 85 -19.132 -88.898 56.596 1.00 9.10 C
ATOM 10 O3' G B 85 -19.939 -87.747 56.480 1.00 9.10 O
ATOM 11 C2' G B 85 -17.661 -88.622 56.932 1.00 9.10 C
ATOM 12 O2' G B 85 -17.523 -87.658 57.971 1.00 9.10 O
ATOM 13 C1' G B 85 -17.233 -89.971 57.494 1.00 9.10 C
ATOM 14 N9 G B 85 -16.522 -90.787 56.501 1.00 9.03 N
ATOM 15 C8 G B 85 -16.817 -92.067 56.092 1.00 9.03 C
ATOM 16 N7 G B 85 -15.962 -92.485 55.199 1.00 9.03 N
ATOM 17 C5 G B 85 -15.072 -91.428 55.047 1.00 9.03 C
ATOM 18 C6 G B 85 -13.941 -91.293 54.235 1.00 9.03 C
ATOM 19 O6 G B 85 -13.462 -92.095 53.433 1.00 9.03 O
ATOM 20 N1 G B 85 -13.346 -90.067 54.394 1.00 9.03 N
ATOM 21 C2 G B 85 -13.772 -89.097 55.214 1.00 9.03 C
ATOM 22 N2 G B 85 -13.030 -87.996 55.192 1.00 9.03 N
ATOM 23 N3 G B 85 -14.812 -89.204 55.986 1.00 9.03 N
ATOM 24 C4 G B 85 -15.401 -90.382 55.843 1.00 9.03 C
ATOM 25 P U B 86 -20.528 -87.326 55.048 1.00 0.08 P
ATOM 26 OP1 U B 86 -21.884 -86.749 55.283 1.00 0.08 O
ATOM 27 OP2 U B 86 -20.395 -88.502 54.148 1.00 0.08 O
ATOM 28 O5' U B 86 -19.527 -86.195 54.607 1.00 0.08 O
TER
Atoms:
OP1: (-14.307,-86.979,68.113)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
OP1: (-22.857,-92.575,57.490)
OP2: (-21.263,-94.123,56.161)
C3': (-19.132,-88.898,56.596)
C1': (-17.233,-89.971,57.494)
C5': (-20.768,-90.643,57.488)
O6: (-13.462,-92.095,53.433)
O4': (-18.403,-90.657,57.900)
C8: (-16.817,-92.067,56.092)
C2: (-13.772,-89.097,55.214)
C6: (-13.941,-91.293,54.235)
C5: (-15.072,-91.428,55.047)
C4: (-15.401,-90.382,55.843)
P: (-21.488,-93.156,57.284)
C4': (-19.554,-89.801,57.730)
C2': (-17.661,-88.622,56.932)
O2': (-17.523,-87.658,57.971)
N1: (-13.346,-90.067,54.394)
N2: (-13.030,-87.996,55.192)
N3: (-14.812,-89.204,55.986)
N7: (-15.962,-92.485,55.199)
N9: (-16.522,-90.787,56.501)
O5': (-20.407,-91.988,57.202)
O3': (-19.939,-87.747,56.480)
OP2: (-21.263,-94.123,56.161)
C3': (-19.132,-88.898,56.596)
C1': (-17.233,-89.971,57.494)
C5': (-20.768,-90.643,57.488)
O6: (-13.462,-92.095,53.433)
O4': (-18.403,-90.657,57.900)
C8: (-16.817,-92.067,56.092)
C2: (-13.772,-89.097,55.214)
C6: (-13.941,-91.293,54.235)
C5: (-15.072,-91.428,55.047)
C4: (-15.401,-90.382,55.843)
P: (-21.488,-93.156,57.284)
C4': (-19.554,-89.801,57.730)
C2': (-17.661,-88.622,56.932)
O2': (-17.523,-87.658,57.971)
N1: (-13.346,-90.067,54.394)
N2: (-13.030,-87.996,55.192)
N3: (-14.812,-89.204,55.986)
N7: (-15.962,-92.485,55.199)
N9: (-16.522,-90.787,56.501)
O5': (-20.407,-91.988,57.202)
O3': (-19.939,-87.747,56.480)
Image (generated by PyMOL):