ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A814:A763

Extra

PDB:
ATOM 1 O3' A A 813 -21.303 106.792 79.485 1.00 6.08 O
ATOM 2 P A A 814 -20.198 107.845 79.954 1.00 4.84 P
ATOM 3 OP1 A A 814 -20.927 108.998 80.580 1.00 4.84 O
ATOM 4 OP2 A A 814 -19.303 108.105 78.780 1.00 4.84 O
ATOM 5 O5' A A 814 -19.419 107.039 81.069 1.00 4.84 O
ATOM 6 C5' A A 814 -18.486 106.059 80.709 1.00 4.84 C
ATOM 7 C4' A A 814 -17.095 106.548 80.937 1.00 4.84 C
ATOM 8 O4' A A 814 -16.965 107.019 82.294 1.00 4.84 O
ATOM 9 C3' A A 814 -16.005 105.511 80.789 1.00 4.84 C
ATOM 10 O3' A A 814 -15.624 105.340 79.447 1.00 4.84 O
ATOM 11 C2' A A 814 -14.888 106.049 81.665 1.00 4.84 C
ATOM 12 O2' A A 814 -14.102 106.990 80.957 1.00 4.84 O
ATOM 13 C1' A A 814 -15.660 106.777 82.762 1.00 4.84 C
ATOM 14 N9 A A 814 -15.739 105.975 83.976 1.00 5.00 N
ATOM 15 C8 A A 814 -16.685 105.103 84.387 1.00 5.00 C
ATOM 16 N7 A A 814 -16.366 104.552 85.522 1.00 5.00 N
ATOM 17 C5 A A 814 -15.144 105.099 85.852 1.00 5.00 C
ATOM 18 C6 A A 814 -14.260 104.936 86.925 1.00 5.00 C
ATOM 19 N6 A A 814 -14.460 104.134 87.968 1.00 5.00 N
ATOM 20 N1 A A 814 -13.124 105.639 86.928 1.00 5.00 N
ATOM 21 C2 A A 814 -12.906 106.456 85.910 1.00 5.00 C
ATOM 22 N3 A A 814 -13.660 106.692 84.843 1.00 5.00 N
ATOM 23 C4 A A 814 -14.765 105.971 84.894 1.00 5.00 C
ATOM 24 P C A 815 -15.410 103.876 78.859 1.00 1.79 P
ATOM 25 OP1 C A 815 -15.993 102.925 79.837 1.00 1.79 O
ATOM 26 OP2 C A 815 -13.973 103.770 78.522 1.00 1.79 O
ATOM 27 O5' C A 815 -16.281 103.889 77.525 1.00 1.79 O
TER

ATOM 1 O3' C B 762 -4.366 112.373 88.326 1.00 6.75 O
ATOM 2 P G B 763 -5.877 112.920 88.454 1.00 8.27 P
ATOM 3 OP1 G B 763 -5.869 114.333 88.005 1.00 8.27 O
ATOM 4 OP2 G B 763 -6.363 112.613 89.824 1.00 8.27 O
ATOM 5 O5' G B 763 -6.653 112.042 87.404 1.00 8.27 O
ATOM 6 C5' G B 763 -7.651 112.623 86.615 1.00 8.27 C
ATOM 7 C4' G B 763 -8.692 111.624 86.256 1.00 8.27 C
ATOM 8 O4' G B 763 -8.115 110.301 86.302 1.00 8.27 O
ATOM 9 C3' G B 763 -9.875 111.556 87.195 1.00 8.27 C
ATOM 10 O3' G B 763 -10.855 112.508 86.888 1.00 8.27 O
ATOM 11 C2' G B 763 -10.365 110.149 87.000 1.00 8.27 C
ATOM 12 O2' G B 763 -11.113 110.054 85.786 1.00 8.27 O
ATOM 13 C1' G B 763 -9.049 109.397 86.838 1.00 8.27 C
ATOM 14 N9 G B 763 -8.532 108.921 88.127 1.00 8.48 N
ATOM 15 C8 G B 763 -7.370 109.330 88.734 1.00 8.48 C
ATOM 16 N7 G B 763 -7.139 108.748 89.872 1.00 8.48 N
ATOM 17 C5 G B 763 -8.213 107.898 90.006 1.00 8.48 C
ATOM 18 C6 G B 763 -8.501 107.021 91.047 1.00 8.48 C
ATOM 19 O6 G B 763 -7.842 106.833 92.072 1.00 8.48 O
ATOM 20 N1 G B 763 -9.686 106.341 90.824 1.00 8.48 N
ATOM 21 C2 G B 763 -10.499 106.481 89.746 1.00 8.48 C
ATOM 22 N2 G B 763 -11.588 105.708 89.778 1.00 8.48 N
ATOM 23 N3 G B 763 -10.254 107.308 88.745 1.00 8.48 N
ATOM 24 C4 G B 763 -9.093 107.979 88.948 1.00 8.48 C
ATOM 25 P A B 764 -10.731 113.996 87.439 1.00 12.14 P
ATOM 26 OP1 A B 764 -9.421 114.517 87.004 1.00 12.14 O
ATOM 27 OP2 A B 764 -11.036 113.964 88.891 1.00 12.14 O
ATOM 28 O5' A B 764 -11.895 114.725 86.657 1.00 12.14 O
TER

Atoms:
OP1: (-20.927,108.998,80.580)
OP2: (-19.303,108.105,78.780)
C3': (-16.005,105.511,80.789)
C1': (-15.660,106.777,82.762)
C5': (-18.486,106.059,80.709)
O4': (-16.965,107.019,82.294)
C8: (-16.685,105.103,84.387)
O2': (-14.102,106.990,80.957)
C6: (-14.260,104.936,86.925)
C5: (-15.144,105.099,85.852)
C4: (-14.765,105.971,84.894)
P: (-20.198,107.845,79.954)
C4': (-17.095,106.548,80.937)
C2': (-14.888,106.049,81.665)
C2: (-12.906,106.456,85.910)
N1: (-13.124,105.639,86.928)
N3: (-13.660,106.692,84.843)
N6: (-14.460,104.134,87.968)
N7: (-16.366,104.552,85.522)
N9: (-15.739,105.975,83.976)
O5': (-19.419,107.039,81.069)
O3': (-15.624,105.340,79.447)
OP1: (-5.869,114.333,88.005)
OP2: (-6.363,112.613,89.824)
C3': (-9.875,111.556,87.195)
C1': (-9.049,109.397,86.838)
C5': (-7.651,112.623,86.615)
O6: (-7.842,106.833,92.072)
O4': (-8.115,110.301,86.302)
C8: (-7.370,109.330,88.734)
C2: (-10.499,106.481,89.746)
C6: (-8.501,107.021,91.047)
C5: (-8.213,107.898,90.006)
C4: (-9.093,107.979,88.948)
P: (-5.877,112.920,88.454)
C4': (-8.692,111.624,86.256)
C2': (-10.365,110.149,87.000)
O2': (-11.113,110.054,85.786)
N1: (-9.686,106.341,90.824)
N2: (-11.588,105.708,89.778)
N3: (-10.254,107.308,88.745)
N7: (-7.139,108.748,89.872)
N9: (-8.532,108.921,88.127)
O5': (-6.653,112.042,87.404)
O3': (-10.855,112.508,86.888)
Image (generated by PyMOL):
PyMOL image
show in jmol