Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1F7Y:B16:B5
Extra
PDB:
ATOM 1 O3' U A 15 -13.202 52.075 11.987 1.00 70.72 O
ATOM 2 P A A 16 -12.458 53.343 12.625 1.00 63.69 P
ATOM 3 OP1 A A 16 -13.026 54.546 11.984 1.00 67.63 O
ATOM 4 OP2 A A 16 -11.000 53.098 12.558 1.00 65.62 O
ATOM 5 O5' A A 16 -12.945 53.335 14.142 1.00 53.13 O
ATOM 6 C5' A A 16 -12.403 52.398 15.092 1.00 54.91 C
ATOM 7 C4' A A 16 -13.041 52.604 16.444 1.00 59.62 C
ATOM 8 O4' A A 16 -14.483 52.464 16.337 1.00 71.95 O
ATOM 9 C3' A A 16 -12.611 51.648 17.544 1.00 60.44 C
ATOM 10 O3' A A 16 -12.659 52.326 18.785 1.00 67.57 O
ATOM 11 C2' A A 16 -13.663 50.546 17.476 1.00 62.38 C
ATOM 12 O2' A A 16 -13.854 49.928 18.736 1.00 51.93 O
ATOM 13 C1' A A 16 -14.916 51.313 17.048 1.00 73.55 C
ATOM 14 N9 A A 16 -15.777 50.537 16.147 1.00 84.95 N
ATOM 15 C8 A A 16 -16.408 50.994 15.015 1.00 86.89 C
ATOM 16 N7 A A 16 -17.095 50.074 14.384 1.00 89.91 N
ATOM 17 C5 A A 16 -16.912 48.935 15.153 1.00 89.69 C
ATOM 18 C6 A A 16 -17.384 47.618 15.016 1.00 95.81 C
ATOM 19 N6 A A 16 -18.173 47.213 14.017 1.00 97.10 N
ATOM 20 N1 A A 16 -17.017 46.720 15.954 1.00 98.21 N
ATOM 21 C2 A A 16 -16.236 47.127 16.960 1.00 97.03 C
ATOM 22 N3 A A 16 -15.732 48.336 17.198 1.00 97.92 N
ATOM 23 C4 A A 16 -16.109 49.205 16.245 1.00 89.24 C
ATOM 24 P G A 17 -11.293 52.821 19.462 1.00 63.53 P
ATOM 25 OP1 G A 17 -11.632 53.875 20.449 1.00 71.73 O
ATOM 26 OP2 G A 17 -10.339 53.121 18.358 1.00 55.30 O
ATOM 27 O5' G A 17 -10.783 51.550 20.265 1.00 44.23 O
TER
ATOM 1 O3' G B 4 -16.556 39.950 24.309 1.00 69.44 O
ATOM 2 P G B 5 -17.374 39.480 23.004 1.00 79.47 P
ATOM 3 OP1 G B 5 -18.803 39.303 23.387 1.00 78.67 O
ATOM 4 OP2 G B 5 -16.627 38.345 22.392 1.00 73.07 O
ATOM 5 O5' G B 5 -17.270 40.706 22.001 1.00 60.72 O
ATOM 6 C5' G B 5 -16.001 41.281 21.684 1.00 60.01 C
ATOM 7 C4' G B 5 -16.204 42.617 21.040 1.00 55.29 C
ATOM 8 O4' G B 5 -14.938 43.113 20.548 1.00 57.21 O
ATOM 9 C3' G B 5 -17.082 42.533 19.812 1.00 60.41 C
ATOM 10 O3' G B 5 -18.446 42.565 20.208 1.00 64.33 O
ATOM 11 C2' G B 5 -16.622 43.735 18.996 1.00 55.83 C
ATOM 12 O2' G B 5 -17.150 44.964 19.454 1.00 59.70 O
ATOM 13 C1' G B 5 -15.120 43.709 19.276 1.00 49.40 C
ATOM 14 N9 G B 5 -14.364 42.913 18.323 1.00 45.96 N
ATOM 15 C8 G B 5 -13.710 41.730 18.575 1.00 38.08 C
ATOM 16 N7 G B 5 -13.083 41.261 17.532 1.00 38.47 N
ATOM 17 C5 G B 5 -13.349 42.182 16.530 1.00 32.99 C
ATOM 18 C6 G B 5 -12.927 42.214 15.182 1.00 42.49 C
ATOM 19 O6 G B 5 -12.191 41.414 14.586 1.00 44.14 O
ATOM 20 N1 G B 5 -13.433 43.325 14.514 1.00 39.80 N
ATOM 21 C2 G B 5 -14.231 44.287 15.079 1.00 43.11 C
ATOM 22 N2 G B 5 -14.625 45.280 14.266 1.00 42.35 N
ATOM 23 N3 G B 5 -14.618 44.278 16.346 1.00 37.18 N
ATOM 24 C4 G B 5 -14.146 43.203 17.004 1.00 37.93 C
ATOM 25 P C B 6 -19.498 41.568 19.520 1.00 63.06 P
ATOM 26 OP1 C B 6 -20.716 41.557 20.379 1.00 52.53 O
ATOM 27 OP2 C B 6 -18.806 40.290 19.215 1.00 57.82 O
ATOM 28 O5' C B 6 -19.831 42.311 18.154 1.00 48.51 O
TER
ATOM 2 P A A 16 -12.458 53.343 12.625 1.00 63.69 P
ATOM 3 OP1 A A 16 -13.026 54.546 11.984 1.00 67.63 O
ATOM 4 OP2 A A 16 -11.000 53.098 12.558 1.00 65.62 O
ATOM 5 O5' A A 16 -12.945 53.335 14.142 1.00 53.13 O
ATOM 6 C5' A A 16 -12.403 52.398 15.092 1.00 54.91 C
ATOM 7 C4' A A 16 -13.041 52.604 16.444 1.00 59.62 C
ATOM 8 O4' A A 16 -14.483 52.464 16.337 1.00 71.95 O
ATOM 9 C3' A A 16 -12.611 51.648 17.544 1.00 60.44 C
ATOM 10 O3' A A 16 -12.659 52.326 18.785 1.00 67.57 O
ATOM 11 C2' A A 16 -13.663 50.546 17.476 1.00 62.38 C
ATOM 12 O2' A A 16 -13.854 49.928 18.736 1.00 51.93 O
ATOM 13 C1' A A 16 -14.916 51.313 17.048 1.00 73.55 C
ATOM 14 N9 A A 16 -15.777 50.537 16.147 1.00 84.95 N
ATOM 15 C8 A A 16 -16.408 50.994 15.015 1.00 86.89 C
ATOM 16 N7 A A 16 -17.095 50.074 14.384 1.00 89.91 N
ATOM 17 C5 A A 16 -16.912 48.935 15.153 1.00 89.69 C
ATOM 18 C6 A A 16 -17.384 47.618 15.016 1.00 95.81 C
ATOM 19 N6 A A 16 -18.173 47.213 14.017 1.00 97.10 N
ATOM 20 N1 A A 16 -17.017 46.720 15.954 1.00 98.21 N
ATOM 21 C2 A A 16 -16.236 47.127 16.960 1.00 97.03 C
ATOM 22 N3 A A 16 -15.732 48.336 17.198 1.00 97.92 N
ATOM 23 C4 A A 16 -16.109 49.205 16.245 1.00 89.24 C
ATOM 24 P G A 17 -11.293 52.821 19.462 1.00 63.53 P
ATOM 25 OP1 G A 17 -11.632 53.875 20.449 1.00 71.73 O
ATOM 26 OP2 G A 17 -10.339 53.121 18.358 1.00 55.30 O
ATOM 27 O5' G A 17 -10.783 51.550 20.265 1.00 44.23 O
TER
ATOM 1 O3' G B 4 -16.556 39.950 24.309 1.00 69.44 O
ATOM 2 P G B 5 -17.374 39.480 23.004 1.00 79.47 P
ATOM 3 OP1 G B 5 -18.803 39.303 23.387 1.00 78.67 O
ATOM 4 OP2 G B 5 -16.627 38.345 22.392 1.00 73.07 O
ATOM 5 O5' G B 5 -17.270 40.706 22.001 1.00 60.72 O
ATOM 6 C5' G B 5 -16.001 41.281 21.684 1.00 60.01 C
ATOM 7 C4' G B 5 -16.204 42.617 21.040 1.00 55.29 C
ATOM 8 O4' G B 5 -14.938 43.113 20.548 1.00 57.21 O
ATOM 9 C3' G B 5 -17.082 42.533 19.812 1.00 60.41 C
ATOM 10 O3' G B 5 -18.446 42.565 20.208 1.00 64.33 O
ATOM 11 C2' G B 5 -16.622 43.735 18.996 1.00 55.83 C
ATOM 12 O2' G B 5 -17.150 44.964 19.454 1.00 59.70 O
ATOM 13 C1' G B 5 -15.120 43.709 19.276 1.00 49.40 C
ATOM 14 N9 G B 5 -14.364 42.913 18.323 1.00 45.96 N
ATOM 15 C8 G B 5 -13.710 41.730 18.575 1.00 38.08 C
ATOM 16 N7 G B 5 -13.083 41.261 17.532 1.00 38.47 N
ATOM 17 C5 G B 5 -13.349 42.182 16.530 1.00 32.99 C
ATOM 18 C6 G B 5 -12.927 42.214 15.182 1.00 42.49 C
ATOM 19 O6 G B 5 -12.191 41.414 14.586 1.00 44.14 O
ATOM 20 N1 G B 5 -13.433 43.325 14.514 1.00 39.80 N
ATOM 21 C2 G B 5 -14.231 44.287 15.079 1.00 43.11 C
ATOM 22 N2 G B 5 -14.625 45.280 14.266 1.00 42.35 N
ATOM 23 N3 G B 5 -14.618 44.278 16.346 1.00 37.18 N
ATOM 24 C4 G B 5 -14.146 43.203 17.004 1.00 37.93 C
ATOM 25 P C B 6 -19.498 41.568 19.520 1.00 63.06 P
ATOM 26 OP1 C B 6 -20.716 41.557 20.379 1.00 52.53 O
ATOM 27 OP2 C B 6 -18.806 40.290 19.215 1.00 57.82 O
ATOM 28 O5' C B 6 -19.831 42.311 18.154 1.00 48.51 O
TER
Atoms:
OP1: (-13.026,54.546,11.984)
OP2: (-11.000,53.098,12.558)
C3': (-12.611,51.648,17.544)
C1': (-14.916,51.313,17.048)
C5': (-12.403,52.398,15.092)
O4': (-14.483,52.464,16.337)
C8: (-16.408,50.994,15.015)
O2': (-13.854,49.928,18.736)
C6: (-17.384,47.618,15.016)
C5: (-16.912,48.935,15.153)
C4: (-16.109,49.205,16.245)
P: (-12.458,53.343,12.625)
C4': (-13.041,52.604,16.444)
C2': (-13.663,50.546,17.476)
C2: (-16.236,47.127,16.960)
N1: (-17.017,46.720,15.954)
N3: (-15.732,48.336,17.198)
N6: (-18.173,47.213,14.017)
N7: (-17.095,50.074,14.384)
N9: (-15.777,50.537,16.147)
O5': (-12.945,53.335,14.142)
O3': (-12.659,52.326,18.785)
OP2: (-11.000,53.098,12.558)
C3': (-12.611,51.648,17.544)
C1': (-14.916,51.313,17.048)
C5': (-12.403,52.398,15.092)
O4': (-14.483,52.464,16.337)
C8: (-16.408,50.994,15.015)
O2': (-13.854,49.928,18.736)
C6: (-17.384,47.618,15.016)
C5: (-16.912,48.935,15.153)
C4: (-16.109,49.205,16.245)
P: (-12.458,53.343,12.625)
C4': (-13.041,52.604,16.444)
C2': (-13.663,50.546,17.476)
C2: (-16.236,47.127,16.960)
N1: (-17.017,46.720,15.954)
N3: (-15.732,48.336,17.198)
N6: (-18.173,47.213,14.017)
N7: (-17.095,50.074,14.384)
N9: (-15.777,50.537,16.147)
O5': (-12.945,53.335,14.142)
O3': (-12.659,52.326,18.785)
OP1: (-18.803,39.303,23.387)
OP2: (-16.627,38.345,22.392)
C3': (-17.082,42.533,19.812)
C1': (-15.120,43.709,19.276)
C5': (-16.001,41.281,21.684)
O6: (-12.191,41.414,14.586)
O4': (-14.938,43.113,20.548)
C8: (-13.710,41.730,18.575)
C2: (-14.231,44.287,15.079)
C6: (-12.927,42.214,15.182)
C5: (-13.349,42.182,16.530)
C4: (-14.146,43.203,17.004)
P: (-17.374,39.480,23.004)
C4': (-16.204,42.617,21.040)
C2': (-16.622,43.735,18.996)
O2': (-17.150,44.964,19.454)
N1: (-13.433,43.325,14.514)
N2: (-14.625,45.280,14.266)
N3: (-14.618,44.278,16.346)
N7: (-13.083,41.261,17.532)
N9: (-14.364,42.913,18.323)
O5': (-17.270,40.706,22.001)
O3': (-18.446,42.565,20.208)
OP2: (-16.627,38.345,22.392)
C3': (-17.082,42.533,19.812)
C1': (-15.120,43.709,19.276)
C5': (-16.001,41.281,21.684)
O6: (-12.191,41.414,14.586)
O4': (-14.938,43.113,20.548)
C8: (-13.710,41.730,18.575)
C2: (-14.231,44.287,15.079)
C6: (-12.927,42.214,15.182)
C5: (-13.349,42.182,16.530)
C4: (-14.146,43.203,17.004)
P: (-17.374,39.480,23.004)
C4': (-16.204,42.617,21.040)
C2': (-16.622,43.735,18.996)
O2': (-17.150,44.964,19.454)
N1: (-13.433,43.325,14.514)
N2: (-14.625,45.280,14.266)
N3: (-14.618,44.278,16.346)
N7: (-13.083,41.261,17.532)
N9: (-14.364,42.913,18.323)
O5': (-17.270,40.706,22.001)
O3': (-18.446,42.565,20.208)
Image (generated by PyMOL):