ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11744:11536

Extra

PDB:
ATOM 1 O3' A A1743 18.902 12.406 139.350 1.00 53.21 O
ATOM 2 P A A1744 18.685 13.163 140.744 1.00 59.32 P
ATOM 3 OP1 A A1744 18.817 12.155 141.817 1.00 59.64 O
ATOM 4 OP2 A A1744 17.423 13.909 140.643 1.00 59.48 O
ATOM 5 O5' A A1744 19.921 14.163 140.774 1.00 59.43 O
ATOM 6 C5' A A1744 21.230 13.671 141.024 1.00 59.39 C
ATOM 7 C4' A A1744 22.279 14.683 140.673 1.00 59.36 C
ATOM 8 O4' A A1744 21.979 15.254 139.383 1.00 58.88 O
ATOM 9 C3' A A1744 22.385 15.890 141.594 1.00 60.01 C
ATOM 10 O3' A A1744 23.170 15.635 142.735 1.00 60.48 O
ATOM 11 C2' A A1744 23.021 16.907 140.696 1.00 59.75 C
ATOM 12 O2' A A1744 24.383 16.586 140.546 1.00 59.57 O
ATOM 13 C1' A A1744 22.314 16.618 139.378 1.00 59.11 C
ATOM 14 N9 A A1744 21.068 17.388 139.245 1.00 59.26 N
ATOM 15 C8 A A1744 19.827 16.985 139.646 1.00 59.44 C
ATOM 16 N7 A A1744 18.922 17.891 139.387 1.00 59.55 N
ATOM 17 C5 A A1744 19.607 18.945 138.782 1.00 59.45 C
ATOM 18 C6 A A1744 19.229 20.198 138.264 1.00 59.50 C
ATOM 19 N6 A A1744 18.003 20.707 138.236 1.00 59.68 N
ATOM 20 N1 A A1744 20.171 20.972 137.731 1.00 59.37 N
ATOM 21 C2 A A1744 21.413 20.518 137.721 1.00 59.20 C
ATOM 22 N3 A A1744 21.879 19.367 138.170 1.00 59.13 N
ATOM 23 C4 A A1744 20.924 18.624 138.695 1.00 59.27 C
ATOM 24 P U A1745 22.567 15.867 144.194 1.00 58.29 P
ATOM 25 OP1 U A1745 23.651 15.564 145.163 1.00 58.67 O
ATOM 26 OP2 U A1745 21.295 15.094 144.254 1.00 58.24 O
ATOM 27 O5' U A1745 22.274 17.413 144.211 1.00 58.61 O
TER

ATOM 1 O3' G B1535 18.390 24.285 134.669 1.00 57.37 O
ATOM 2 P G B1536 18.812 25.749 135.145 1.00 57.56 P
ATOM 3 OP1 G B1536 17.751 26.189 136.066 1.00 58.15 O
ATOM 4 OP2 G B1536 19.106 26.564 133.942 1.00 57.22 O
ATOM 5 O5' G B1536 20.145 25.488 135.948 1.00 57.76 O
ATOM 6 C5' G B1536 20.158 24.591 137.047 1.00 58.03 C
ATOM 7 C4' G B1536 21.551 24.383 137.563 1.00 58.13 C
ATOM 8 O4' G B1536 22.380 23.885 136.486 1.00 57.48 O
ATOM 9 C3' G B1536 22.246 25.630 138.066 1.00 58.62 C
ATOM 10 O3' G B1536 23.165 25.249 139.066 1.00 58.94 O
ATOM 11 C2' G B1536 23.019 26.086 136.843 1.00 58.14 C
ATOM 12 O2' G B1536 24.129 26.903 137.120 1.00 58.42 O
ATOM 13 C1' G B1536 23.456 24.762 136.272 1.00 57.54 C
ATOM 14 N9 G B1536 23.729 24.819 134.849 1.00 56.92 N
ATOM 15 C8 G B1536 22.834 25.063 133.839 1.00 56.58 C
ATOM 16 N7 G B1536 23.355 25.095 132.660 1.00 56.06 N
ATOM 17 C5 G B1536 24.656 24.859 132.949 1.00 56.06 C
ATOM 18 C6 G B1536 25.708 24.795 132.087 1.00 55.64 C
ATOM 19 O6 G B1536 25.646 24.904 130.934 1.00 55.19 O
ATOM 20 N1 G B1536 26.953 24.569 132.592 1.00 55.75 N
ATOM 21 C2 G B1536 27.188 24.400 133.896 1.00 56.27 C
ATOM 22 N2 G B1536 28.503 24.176 134.070 1.00 56.25 N
ATOM 23 N3 G B1536 26.200 24.443 134.829 1.00 56.71 N
ATOM 24 C4 G B1536 24.954 24.683 134.265 1.00 56.57 C
ATOM 25 P A B1537 22.815 25.465 140.606 1.00 63.71 P
ATOM 26 OP1 A B1537 24.028 25.105 141.370 1.00 63.93 O
ATOM 27 OP2 A B1537 21.532 24.740 140.893 1.00 63.73 O
ATOM 28 O5' A B1537 22.562 27.017 140.683 1.00 64.15 O
TER

Atoms:
OP1: (18.817,12.155,141.817)
OP2: (17.423,13.909,140.643)
C3': (22.385,15.890,141.594)
C1': (22.314,16.618,139.378)
C5': (21.230,13.671,141.024)
O4': (21.979,15.254,139.383)
C8: (19.827,16.985,139.646)
O2': (24.383,16.586,140.546)
C6: (19.229,20.198,138.264)
C5: (19.607,18.945,138.782)
C4: (20.924,18.624,138.695)
P: (18.685,13.163,140.744)
C4': (22.279,14.683,140.673)
C2': (23.021,16.907,140.696)
C2: (21.413,20.518,137.721)
N1: (20.171,20.972,137.731)
N3: (21.879,19.367,138.170)
N6: (18.003,20.707,138.236)
N7: (18.922,17.891,139.387)
N9: (21.068,17.388,139.245)
O5': (19.921,14.163,140.774)
O3': (23.170,15.635,142.735)
OP1: (17.751,26.189,136.066)
OP2: (19.106,26.564,133.942)
C3': (22.246,25.630,138.066)
C1': (23.456,24.762,136.272)
C5': (20.158,24.591,137.047)
O6: (25.646,24.904,130.934)
O4': (22.380,23.885,136.486)
C8: (22.834,25.063,133.839)
C2: (27.188,24.400,133.896)
C6: (25.708,24.795,132.087)
C5: (24.656,24.859,132.949)
C4: (24.954,24.683,134.265)
P: (18.812,25.749,135.145)
C4': (21.551,24.383,137.563)
C2': (23.019,26.086,136.843)
O2': (24.129,26.903,137.120)
N1: (26.953,24.569,132.592)
N2: (28.503,24.176,134.070)
N3: (26.200,24.443,134.829)
N7: (23.355,25.095,132.660)
N9: (23.729,24.819,134.849)
O5': (20.145,25.488,135.948)
O3': (23.165,25.249,139.066)
Image (generated by PyMOL):
PyMOL image
show in jmol