Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A7:A43
Extra
PDB:
ATOM 1 O3' U A 6 6.865 -22.931 21.736 1.00 33.69 O
ATOM 2 P A A 7 6.841 -21.427 21.155 1.00 33.67 P
ATOM 3 OP1 A A 7 5.420 -21.066 20.937 1.00 33.64 O
ATOM 4 OP2 A A 7 7.770 -21.384 20.004 1.00 35.86 O
ATOM 5 O5' A A 7 7.439 -20.570 22.354 1.00 35.95 O
ATOM 6 C5' A A 7 6.776 -20.499 23.605 1.00 35.53 C
ATOM 7 C4' A A 7 7.522 -19.613 24.563 1.00 35.13 C
ATOM 8 O4' A A 7 8.830 -20.183 24.839 1.00 34.19 O
ATOM 9 C3' A A 7 7.832 -18.216 24.057 1.00 34.14 C
ATOM 10 O3' A A 7 6.736 -17.328 24.177 1.00 34.19 O
ATOM 11 C2' A A 7 9.044 -17.821 24.889 1.00 34.35 C
ATOM 12 O2' A A 7 8.652 -17.437 26.197 1.00 34.58 O
ATOM 13 C1' A A 7 9.786 -19.155 24.981 1.00 34.33 C
ATOM 14 N9 A A 7 10.789 -19.300 23.911 1.00 34.26 N
ATOM 15 C8 A A 7 10.658 -19.931 22.697 1.00 34.08 C
ATOM 16 N7 A A 7 11.740 -19.883 21.959 1.00 34.12 N
ATOM 17 C5 A A 7 12.643 -19.173 22.740 1.00 41.09 C
ATOM 18 C6 A A 7 13.976 -18.775 22.531 1.00 41.75 C
ATOM 19 N6 A A 7 14.665 -19.051 21.421 1.00 43.54 N
ATOM 20 N1 A A 7 14.588 -18.073 23.512 1.00 41.64 N
ATOM 21 C2 A A 7 13.900 -17.798 24.627 1.00 40.78 C
ATOM 22 N3 A A 7 12.646 -18.117 24.940 1.00 41.85 N
ATOM 23 C4 A A 7 12.068 -18.812 23.944 1.00 41.59 C
ATOM 24 P G A 8 6.467 -16.231 23.037 1.00 35.94 P
ATOM 25 OP1 G A 8 5.157 -15.601 23.336 1.00 38.14 O
ATOM 26 OP2 G A 8 6.655 -16.901 21.729 1.00 33.93 O
ATOM 27 O5' G A 8 7.638 -15.186 23.282 1.00 34.28 O
TER
ATOM 1 O3' C B 42 19.911 -12.647 31.614 1.00 51.50 O
ATOM 2 P G B 43 18.590 -11.844 31.170 1.00 46.79 P
ATOM 3 OP1 G B 43 19.035 -10.552 30.594 1.00 50.22 O
ATOM 4 OP2 G B 43 17.674 -11.825 32.337 1.00 43.25 O
ATOM 5 O5' G B 43 17.987 -12.767 30.023 1.00 33.45 O
ATOM 6 C5' G B 43 18.716 -13.013 28.830 1.00 35.23 C
ATOM 7 C4' G B 43 17.932 -13.878 27.879 1.00 36.72 C
ATOM 8 O4' G B 43 17.747 -15.197 28.458 1.00 35.93 O
ATOM 9 C3' G B 43 16.519 -13.406 27.567 1.00 35.19 C
ATOM 10 O3' G B 43 16.480 -12.406 26.564 1.00 32.80 O
ATOM 11 C2' G B 43 15.813 -14.696 27.172 1.00 34.87 C
ATOM 12 O2' G B 43 16.133 -15.057 25.836 1.00 36.35 O
ATOM 13 C1' G B 43 16.474 -15.701 28.116 1.00 33.01 C
ATOM 14 N9 G B 43 15.697 -15.888 29.356 1.00 30.38 N
ATOM 15 C8 G B 43 16.095 -15.629 30.645 1.00 30.70 C
ATOM 16 N7 G B 43 15.172 -15.901 31.530 1.00 29.87 N
ATOM 17 C5 G B 43 14.104 -16.375 30.779 1.00 29.75 C
ATOM 18 C6 G B 43 12.821 -16.829 31.178 1.00 28.57 C
ATOM 19 O6 G B 43 12.353 -16.910 32.319 1.00 28.02 O
ATOM 20 N1 G B 43 12.050 -17.213 30.085 1.00 27.84 N
ATOM 21 C2 G B 43 12.460 -17.171 28.775 1.00 26.12 C
ATOM 22 N2 G B 43 11.577 -17.585 27.854 1.00 22.89 N
ATOM 23 N3 G B 43 13.652 -16.750 28.391 1.00 28.81 N
ATOM 24 C4 G B 43 14.415 -16.372 29.436 1.00 28.85 C
ATOM 25 P U B 44 15.399 -11.222 26.644 1.00 34.14 P
ATOM 26 OP1 U B 44 15.563 -10.399 25.420 1.00 38.59 O
ATOM 27 OP2 U B 44 15.560 -10.572 27.969 1.00 32.24 O
ATOM 28 O5' U B 44 14.014 -12.002 26.590 1.00 30.94 O
TER
ATOM 2 P A A 7 6.841 -21.427 21.155 1.00 33.67 P
ATOM 3 OP1 A A 7 5.420 -21.066 20.937 1.00 33.64 O
ATOM 4 OP2 A A 7 7.770 -21.384 20.004 1.00 35.86 O
ATOM 5 O5' A A 7 7.439 -20.570 22.354 1.00 35.95 O
ATOM 6 C5' A A 7 6.776 -20.499 23.605 1.00 35.53 C
ATOM 7 C4' A A 7 7.522 -19.613 24.563 1.00 35.13 C
ATOM 8 O4' A A 7 8.830 -20.183 24.839 1.00 34.19 O
ATOM 9 C3' A A 7 7.832 -18.216 24.057 1.00 34.14 C
ATOM 10 O3' A A 7 6.736 -17.328 24.177 1.00 34.19 O
ATOM 11 C2' A A 7 9.044 -17.821 24.889 1.00 34.35 C
ATOM 12 O2' A A 7 8.652 -17.437 26.197 1.00 34.58 O
ATOM 13 C1' A A 7 9.786 -19.155 24.981 1.00 34.33 C
ATOM 14 N9 A A 7 10.789 -19.300 23.911 1.00 34.26 N
ATOM 15 C8 A A 7 10.658 -19.931 22.697 1.00 34.08 C
ATOM 16 N7 A A 7 11.740 -19.883 21.959 1.00 34.12 N
ATOM 17 C5 A A 7 12.643 -19.173 22.740 1.00 41.09 C
ATOM 18 C6 A A 7 13.976 -18.775 22.531 1.00 41.75 C
ATOM 19 N6 A A 7 14.665 -19.051 21.421 1.00 43.54 N
ATOM 20 N1 A A 7 14.588 -18.073 23.512 1.00 41.64 N
ATOM 21 C2 A A 7 13.900 -17.798 24.627 1.00 40.78 C
ATOM 22 N3 A A 7 12.646 -18.117 24.940 1.00 41.85 N
ATOM 23 C4 A A 7 12.068 -18.812 23.944 1.00 41.59 C
ATOM 24 P G A 8 6.467 -16.231 23.037 1.00 35.94 P
ATOM 25 OP1 G A 8 5.157 -15.601 23.336 1.00 38.14 O
ATOM 26 OP2 G A 8 6.655 -16.901 21.729 1.00 33.93 O
ATOM 27 O5' G A 8 7.638 -15.186 23.282 1.00 34.28 O
TER
ATOM 1 O3' C B 42 19.911 -12.647 31.614 1.00 51.50 O
ATOM 2 P G B 43 18.590 -11.844 31.170 1.00 46.79 P
ATOM 3 OP1 G B 43 19.035 -10.552 30.594 1.00 50.22 O
ATOM 4 OP2 G B 43 17.674 -11.825 32.337 1.00 43.25 O
ATOM 5 O5' G B 43 17.987 -12.767 30.023 1.00 33.45 O
ATOM 6 C5' G B 43 18.716 -13.013 28.830 1.00 35.23 C
ATOM 7 C4' G B 43 17.932 -13.878 27.879 1.00 36.72 C
ATOM 8 O4' G B 43 17.747 -15.197 28.458 1.00 35.93 O
ATOM 9 C3' G B 43 16.519 -13.406 27.567 1.00 35.19 C
ATOM 10 O3' G B 43 16.480 -12.406 26.564 1.00 32.80 O
ATOM 11 C2' G B 43 15.813 -14.696 27.172 1.00 34.87 C
ATOM 12 O2' G B 43 16.133 -15.057 25.836 1.00 36.35 O
ATOM 13 C1' G B 43 16.474 -15.701 28.116 1.00 33.01 C
ATOM 14 N9 G B 43 15.697 -15.888 29.356 1.00 30.38 N
ATOM 15 C8 G B 43 16.095 -15.629 30.645 1.00 30.70 C
ATOM 16 N7 G B 43 15.172 -15.901 31.530 1.00 29.87 N
ATOM 17 C5 G B 43 14.104 -16.375 30.779 1.00 29.75 C
ATOM 18 C6 G B 43 12.821 -16.829 31.178 1.00 28.57 C
ATOM 19 O6 G B 43 12.353 -16.910 32.319 1.00 28.02 O
ATOM 20 N1 G B 43 12.050 -17.213 30.085 1.00 27.84 N
ATOM 21 C2 G B 43 12.460 -17.171 28.775 1.00 26.12 C
ATOM 22 N2 G B 43 11.577 -17.585 27.854 1.00 22.89 N
ATOM 23 N3 G B 43 13.652 -16.750 28.391 1.00 28.81 N
ATOM 24 C4 G B 43 14.415 -16.372 29.436 1.00 28.85 C
ATOM 25 P U B 44 15.399 -11.222 26.644 1.00 34.14 P
ATOM 26 OP1 U B 44 15.563 -10.399 25.420 1.00 38.59 O
ATOM 27 OP2 U B 44 15.560 -10.572 27.969 1.00 32.24 O
ATOM 28 O5' U B 44 14.014 -12.002 26.590 1.00 30.94 O
TER
Atoms:
OP1: (5.420,-21.066,20.937)
OP2: (7.770,-21.384,20.004)
C3': (7.832,-18.216,24.057)
C1': (9.786,-19.155,24.981)
C5': (6.776,-20.499,23.605)
O4': (8.830,-20.183,24.839)
C8: (10.658,-19.931,22.697)
O2': (8.652,-17.437,26.197)
C6: (13.976,-18.775,22.531)
C5: (12.643,-19.173,22.740)
C4: (12.068,-18.812,23.944)
P: (6.841,-21.427,21.155)
C4': (7.522,-19.613,24.563)
C2': (9.044,-17.821,24.889)
C2: (13.900,-17.798,24.627)
N1: (14.588,-18.073,23.512)
N3: (12.646,-18.117,24.940)
N6: (14.665,-19.051,21.421)
N7: (11.740,-19.883,21.959)
N9: (10.789,-19.300,23.911)
O5': (7.439,-20.570,22.354)
O3': (6.736,-17.328,24.177)
OP2: (7.770,-21.384,20.004)
C3': (7.832,-18.216,24.057)
C1': (9.786,-19.155,24.981)
C5': (6.776,-20.499,23.605)
O4': (8.830,-20.183,24.839)
C8: (10.658,-19.931,22.697)
O2': (8.652,-17.437,26.197)
C6: (13.976,-18.775,22.531)
C5: (12.643,-19.173,22.740)
C4: (12.068,-18.812,23.944)
P: (6.841,-21.427,21.155)
C4': (7.522,-19.613,24.563)
C2': (9.044,-17.821,24.889)
C2: (13.900,-17.798,24.627)
N1: (14.588,-18.073,23.512)
N3: (12.646,-18.117,24.940)
N6: (14.665,-19.051,21.421)
N7: (11.740,-19.883,21.959)
N9: (10.789,-19.300,23.911)
O5': (7.439,-20.570,22.354)
O3': (6.736,-17.328,24.177)
OP1: (19.035,-10.552,30.594)
OP2: (17.674,-11.825,32.337)
C3': (16.519,-13.406,27.567)
C1': (16.474,-15.701,28.116)
C5': (18.716,-13.013,28.830)
O6: (12.353,-16.910,32.319)
O4': (17.747,-15.197,28.458)
C8: (16.095,-15.629,30.645)
C2: (12.460,-17.171,28.775)
C6: (12.821,-16.829,31.178)
C5: (14.104,-16.375,30.779)
C4: (14.415,-16.372,29.436)
P: (18.590,-11.844,31.170)
C4': (17.932,-13.878,27.879)
C2': (15.813,-14.696,27.172)
O2': (16.133,-15.057,25.836)
N1: (12.050,-17.213,30.085)
N2: (11.577,-17.585,27.854)
N3: (13.652,-16.750,28.391)
N7: (15.172,-15.901,31.530)
N9: (15.697,-15.888,29.356)
O5': (17.987,-12.767,30.023)
O3': (16.480,-12.406,26.564)
OP2: (17.674,-11.825,32.337)
C3': (16.519,-13.406,27.567)
C1': (16.474,-15.701,28.116)
C5': (18.716,-13.013,28.830)
O6: (12.353,-16.910,32.319)
O4': (17.747,-15.197,28.458)
C8: (16.095,-15.629,30.645)
C2: (12.460,-17.171,28.775)
C6: (12.821,-16.829,31.178)
C5: (14.104,-16.375,30.779)
C4: (14.415,-16.372,29.436)
P: (18.590,-11.844,31.170)
C4': (17.932,-13.878,27.879)
C2': (15.813,-14.696,27.172)
O2': (16.133,-15.057,25.836)
N1: (12.050,-17.213,30.085)
N2: (11.577,-17.585,27.854)
N3: (13.652,-16.750,28.391)
N7: (15.172,-15.901,31.530)
N9: (15.697,-15.888,29.356)
O5': (17.987,-12.767,30.023)
O3': (16.480,-12.406,26.564)
Image (generated by PyMOL):