ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A236:A237

Extra

PDB:
ATOM 1 O3' A A 235 92.311 123.722 -7.485 1.00 71.35 O
ATOM 2 P A A 236 91.824 124.432 -8.829 1.00 73.02 P
ATOM 3 OP1 A A 236 92.852 124.182 -9.873 1.00 73.43 O
ATOM 4 OP2 A A 236 91.446 125.825 -8.479 1.00 74.32 O
ATOM 5 O5' A A 236 90.507 123.640 -9.252 1.00 72.86 O
ATOM 6 C5' A A 236 89.344 123.605 -8.408 1.00 71.85 C
ATOM 7 C4' A A 236 88.415 122.518 -8.878 1.00 72.19 C
ATOM 8 O4' A A 236 89.166 121.292 -9.005 1.00 71.57 O
ATOM 9 C3' A A 236 87.277 122.192 -7.930 1.00 73.02 C
ATOM 10 O3' A A 236 86.152 123.016 -8.234 1.00 74.91 O
ATOM 11 C2' A A 236 86.962 120.737 -8.262 1.00 72.82 C
ATOM 12 O2' A A 236 86.077 120.607 -9.354 1.00 73.36 O
ATOM 13 C1' A A 236 88.334 120.199 -8.680 1.00 72.58 C
ATOM 14 N9 A A 236 89.053 119.346 -7.740 1.00 73.57 N
ATOM 15 C8 A A 236 89.630 118.128 -8.025 1.00 74.18 C
ATOM 16 N7 A A 236 90.283 117.601 -7.021 1.00 74.28 N
ATOM 17 C5 A A 236 90.112 118.522 -5.996 1.00 74.23 C
ATOM 18 C6 A A 236 90.574 118.547 -4.673 1.00 73.53 C
ATOM 19 N6 A A 236 91.347 117.590 -4.143 1.00 73.24 N
ATOM 20 N1 A A 236 90.220 119.601 -3.904 1.00 73.45 N
ATOM 21 C2 A A 236 89.462 120.569 -4.447 1.00 73.86 C
ATOM 22 N3 A A 236 88.972 120.664 -5.685 1.00 74.16 N
ATOM 23 C4 A A 236 89.339 119.595 -6.419 1.00 74.45 C
ATOM 24 P G A 237 85.858 124.340 -7.366 1.00 77.34 P
ATOM 25 OP1 G A 237 84.395 124.625 -7.491 1.00 76.54 O
ATOM 26 OP2 G A 237 86.841 125.387 -7.748 1.00 76.94 O
ATOM 27 O5' G A 237 86.188 123.911 -5.866 1.00 77.20 O
TER

ATOM 1 O3' A B 236 86.152 123.016 -8.234 1.00 74.91 O
ATOM 2 P G B 237 85.858 124.340 -7.366 1.00 77.34 P
ATOM 3 OP1 G B 237 84.395 124.625 -7.491 1.00 76.54 O
ATOM 4 OP2 G B 237 86.841 125.387 -7.748 1.00 76.94 O
ATOM 5 O5' G B 237 86.188 123.911 -5.866 1.00 77.20 O
ATOM 6 C5' G B 237 85.460 122.848 -5.218 1.00 77.51 C
ATOM 7 C4' G B 237 85.554 122.985 -3.711 1.00 77.20 C
ATOM 8 O4' G B 237 86.921 122.756 -3.283 1.00 77.30 O
ATOM 9 C3' G B 237 85.206 124.354 -3.137 1.00 76.61 C
ATOM 10 O3' G B 237 83.801 124.524 -2.981 1.00 76.26 O
ATOM 11 C2' G B 237 85.928 124.334 -1.800 1.00 76.85 C
ATOM 12 O2' G B 237 85.240 123.589 -0.816 1.00 77.23 O
ATOM 13 C1' G B 237 87.212 123.590 -2.171 1.00 77.49 C
ATOM 14 N9 G B 237 88.287 124.502 -2.548 1.00 78.15 N
ATOM 15 C8 G B 237 88.775 124.740 -3.809 1.00 78.59 C
ATOM 16 N7 G B 237 89.739 125.622 -3.826 1.00 79.38 N
ATOM 17 C5 G B 237 89.898 125.987 -2.495 1.00 78.79 C
ATOM 18 C6 G B 237 90.794 126.909 -1.891 1.00 78.87 C
ATOM 19 O6 G B 237 91.650 127.620 -2.427 1.00 80.01 O
ATOM 20 N1 G B 237 90.619 126.961 -0.514 1.00 79.18 N
ATOM 21 C2 G B 237 89.698 126.227 0.192 1.00 79.67 C
ATOM 22 N2 G B 237 89.689 126.399 1.514 1.00 80.34 N
ATOM 23 N3 G B 237 88.851 125.380 -0.357 1.00 79.92 N
ATOM 24 C4 G B 237 89.009 125.305 -1.694 1.00 79.05 C
ATOM 25 P C B 238 83.194 125.996 -2.783 1.00 76.72 P
ATOM 26 OP1 C B 238 81.709 125.886 -2.807 1.00 76.16 O
ATOM 27 OP2 C B 238 83.881 126.906 -3.737 1.00 79.13 O
ATOM 28 O5' C B 238 83.650 126.404 -1.312 1.00 78.58 O
TER

Atoms:
OP1: (92.852,124.182,-9.873)
OP2: (91.446,125.825,-8.479)
C3': (87.277,122.192,-7.930)
C1': (88.334,120.199,-8.680)
C5': (89.344,123.605,-8.408)
O4': (89.166,121.292,-9.005)
C8: (89.630,118.128,-8.025)
O2': (86.077,120.607,-9.354)
C6: (90.574,118.547,-4.673)
C5: (90.112,118.522,-5.996)
C4: (89.339,119.595,-6.419)
P: (91.824,124.432,-8.829)
C4': (88.415,122.518,-8.878)
C2': (86.962,120.737,-8.262)
C2: (89.462,120.569,-4.447)
N1: (90.220,119.601,-3.904)
N3: (88.972,120.664,-5.685)
N6: (91.347,117.590,-4.143)
N7: (90.283,117.601,-7.021)
N9: (89.053,119.346,-7.740)
O5': (90.507,123.640,-9.252)
O3': (86.152,123.016,-8.234)
OP1: (84.395,124.625,-7.491)
OP2: (86.841,125.387,-7.748)
C3': (85.206,124.354,-3.137)
C1': (87.212,123.590,-2.171)
C5': (85.460,122.848,-5.218)
O6: (91.650,127.620,-2.427)
O4': (86.921,122.756,-3.283)
C8: (88.775,124.740,-3.809)
C2: (89.698,126.227,0.192)
C6: (90.794,126.909,-1.891)
C5: (89.898,125.987,-2.495)
C4: (89.009,125.305,-1.694)
P: (85.858,124.340,-7.366)
C4': (85.554,122.985,-3.711)
C2': (85.928,124.334,-1.800)
O2': (85.240,123.589,-0.816)
N1: (90.619,126.961,-0.514)
N2: (89.689,126.399,1.514)
N3: (88.851,125.380,-0.357)
N7: (89.739,125.622,-3.826)
N9: (88.287,124.502,-2.548)
O5': (86.188,123.911,-5.866)
O3': (83.801,124.524,-2.981)
Image (generated by PyMOL):
PyMOL image
show in jmol