ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A554:A1053

Extra

PDB:
ATOM 1 O3' A A 553 -0.494 91.697 98.408 1.00 36.89 O
ATOM 2 P A A 554 -0.659 91.082 99.888 1.00 37.43 P
ATOM 3 OP1 A A 554 -0.839 89.617 99.683 1.00 35.62 O
ATOM 4 OP2 A A 554 -1.664 91.857 100.671 1.00 37.42 O
ATOM 5 O5' A A 554 0.750 91.309 100.587 1.00 35.95 O
ATOM 6 C5' A A 554 1.965 90.821 100.001 1.00 34.18 C
ATOM 7 C4' A A 554 3.115 91.695 100.416 1.00 31.55 C
ATOM 8 O4' A A 554 2.936 93.035 99.889 1.00 32.59 O
ATOM 9 C3' A A 554 3.196 91.934 101.899 1.00 30.21 C
ATOM 10 O3' A A 554 3.775 90.841 102.553 1.00 29.00 O
ATOM 11 C2' A A 554 4.053 93.179 101.964 1.00 31.02 C
ATOM 12 O2' A A 554 5.421 92.899 101.761 1.00 31.77 O
ATOM 13 C1' A A 554 3.493 93.976 100.790 1.00 31.30 C
ATOM 14 N9 A A 554 2.442 94.897 101.215 1.00 32.46 N
ATOM 15 C8 A A 554 1.105 94.638 101.379 1.00 34.25 C
ATOM 16 N7 A A 554 0.409 95.673 101.781 1.00 34.67 N
ATOM 17 C5 A A 554 1.351 96.684 101.882 1.00 33.67 C
ATOM 18 C6 A A 554 1.248 98.034 102.250 1.00 33.71 C
ATOM 19 N6 A A 554 0.099 98.623 102.582 1.00 34.47 N
ATOM 20 N1 A A 554 2.378 98.773 102.259 1.00 32.95 N
ATOM 21 C2 A A 554 3.526 98.186 101.911 1.00 34.73 C
ATOM 22 N3 A A 554 3.750 96.929 101.536 1.00 34.58 N
ATOM 23 C4 A A 554 2.607 96.220 101.541 1.00 33.24 C
ATOM 24 P U A 555 3.171 90.365 103.952 1.00 29.91 P
ATOM 25 OP1 U A 555 4.074 89.326 104.474 1.00 27.77 O
ATOM 26 OP2 U A 555 1.755 90.034 103.700 1.00 31.06 O
ATOM 27 O5' U A 555 3.253 91.664 104.872 1.00 26.55 O
TER

ATOM 1 O3' G B1052 4.186 103.395 103.124 1.00 34.83 O
ATOM 2 P G B1053 5.023 103.369 104.496 1.00 35.41 P
ATOM 3 OP1 G B1053 4.099 103.752 105.567 1.00 33.85 O
ATOM 4 OP2 G B1053 6.236 104.181 104.267 1.00 38.18 O
ATOM 5 O5' G B1053 5.503 101.852 104.668 1.00 34.24 O
ATOM 6 C5' G B1053 4.577 100.827 105.053 1.00 32.44 C
ATOM 7 C4' G B1053 5.199 99.433 104.950 1.00 32.02 C
ATOM 8 O4' G B1053 5.964 99.298 103.723 1.00 31.68 O
ATOM 9 C3' G B1053 6.232 98.973 105.977 1.00 29.64 C
ATOM 10 O3' G B1053 5.639 98.596 107.209 1.00 29.47 O
ATOM 11 C2' G B1053 6.752 97.711 105.303 1.00 31.22 C
ATOM 12 O2' G B1053 5.835 96.642 105.428 1.00 30.55 O
ATOM 13 C1' G B1053 6.777 98.135 103.830 1.00 33.15 C
ATOM 14 N9 G B1053 8.134 98.436 103.368 1.00 35.68 N
ATOM 15 C8 G B1053 8.670 99.670 103.070 1.00 36.71 C
ATOM 16 N7 G B1053 9.922 99.607 102.705 1.00 36.04 N
ATOM 17 C5 G B1053 10.234 98.257 102.759 1.00 36.28 C
ATOM 18 C6 G B1053 11.453 97.591 102.483 1.00 37.16 C
ATOM 19 O6 G B1053 12.532 98.076 102.111 1.00 39.24 O
ATOM 20 N1 G B1053 11.345 96.221 102.681 1.00 37.00 N
ATOM 21 C2 G B1053 10.213 95.573 103.090 1.00 38.49 C
ATOM 22 N2 G B1053 10.310 94.246 103.238 1.00 37.52 N
ATOM 23 N3 G B1053 9.063 96.182 103.343 1.00 38.03 N
ATOM 24 C4 G B1053 9.147 97.518 103.160 1.00 36.27 C
ATOM 25 P U B1054 6.490 98.670 108.563 1.00 30.17 P
ATOM 26 OP1 U B1054 5.579 98.364 109.680 1.00 28.78 O
ATOM 27 OP2 U B1054 7.205 99.955 108.551 1.00 29.55 O
ATOM 28 O5' U B1054 7.567 97.506 108.425 1.00 27.76 O
TER

Atoms:
OP1: (-0.839,89.617,99.683)
OP2: (-1.664,91.857,100.671)
C3': (3.196,91.934,101.899)
C1': (3.493,93.976,100.790)
C5': (1.965,90.821,100.001)
O4': (2.936,93.035,99.889)
C8: (1.105,94.638,101.379)
O2': (5.421,92.899,101.761)
C6: (1.248,98.034,102.250)
C5: (1.351,96.684,101.882)
C4: (2.607,96.220,101.541)
P: (-0.659,91.082,99.888)
C4': (3.115,91.695,100.416)
C2': (4.053,93.179,101.964)
C2: (3.526,98.186,101.911)
N1: (2.378,98.773,102.259)
N3: (3.750,96.929,101.536)
N6: (0.099,98.623,102.582)
N7: (0.409,95.673,101.781)
N9: (2.442,94.897,101.215)
O5': (0.750,91.309,100.587)
O3': (3.775,90.841,102.553)
OP1: (4.099,103.752,105.567)
OP2: (6.236,104.181,104.267)
C3': (6.232,98.973,105.977)
C1': (6.777,98.135,103.830)
C5': (4.577,100.827,105.053)
O6: (12.532,98.076,102.111)
O4': (5.964,99.298,103.723)
C8: (8.670,99.670,103.070)
C2: (10.213,95.573,103.090)
C6: (11.453,97.591,102.483)
C5: (10.234,98.257,102.759)
C4: (9.147,97.518,103.160)
P: (5.023,103.369,104.496)
C4': (5.199,99.433,104.950)
C2': (6.752,97.711,105.303)
O2': (5.835,96.642,105.428)
N1: (11.345,96.221,102.681)
N2: (10.310,94.246,103.238)
N3: (9.063,96.182,103.343)
N7: (9.922,99.607,102.705)
N9: (8.134,98.436,103.368)
O5': (5.503,101.852,104.668)
O3': (5.639,98.596,107.209)
Image (generated by PyMOL):
PyMOL image
show in jmol