Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B38:B43
Extra
PDB:
ATOM 1 O3' C A 37 -162.558 -37.689 44.034 1.00 16.86 O
ATOM 2 P A A 38 -161.906 -36.312 43.525 1.00 16.98 P
ATOM 3 OP1 A A 38 -160.436 -36.445 43.649 1.00 16.98 O
ATOM 4 OP2 A A 38 -162.589 -35.204 44.248 1.00 16.98 O
ATOM 5 O5' A A 38 -162.319 -36.300 41.991 1.00 16.98 O
ATOM 6 C5' A A 38 -161.823 -37.300 41.128 1.00 16.98 C
ATOM 7 C4' A A 38 -162.160 -37.020 39.695 1.00 16.98 C
ATOM 8 O4' A A 38 -163.594 -36.974 39.530 1.00 16.98 O
ATOM 9 C3' A A 38 -161.694 -35.693 39.140 1.00 16.98 C
ATOM 10 O3' A A 38 -160.324 -35.696 38.792 1.00 16.98 O
ATOM 11 C2' A A 38 -162.606 -35.526 37.951 1.00 16.98 C
ATOM 12 O2' A A 38 -162.178 -36.368 36.901 1.00 16.98 O
ATOM 13 C1' A A 38 -163.915 -36.076 38.503 1.00 16.98 C
ATOM 14 N9 A A 38 -164.767 -35.030 39.071 1.00 17.25 N
ATOM 15 C8 A A 38 -164.744 -34.530 40.337 1.00 17.25 C
ATOM 16 N7 A A 38 -165.656 -33.622 40.562 1.00 17.25 N
ATOM 17 C5 A A 38 -166.326 -33.557 39.366 1.00 17.25 C
ATOM 18 C6 A A 38 -167.412 -32.786 38.967 1.00 17.25 C
ATOM 19 N6 A A 38 -168.033 -31.904 39.766 1.00 17.25 N
ATOM 20 N1 A A 38 -167.829 -32.953 37.698 1.00 17.25 N
ATOM 21 C2 A A 38 -167.200 -33.837 36.913 1.00 17.25 C
ATOM 22 N3 A A 38 -166.176 -34.625 37.185 1.00 17.25 N
ATOM 23 C4 A A 38 -165.793 -34.418 38.442 1.00 17.25 C
ATOM 24 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 25 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 26 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 27 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
TER
ATOM 1 O3' C B 42 -167.645 -29.916 31.766 1.00 17.72 O
ATOM 2 P G B 43 -168.071 -30.284 33.256 1.00 10.92 P
ATOM 3 OP1 G B 43 -169.411 -29.671 33.484 1.00 10.92 O
ATOM 4 OP2 G B 43 -166.965 -29.898 34.142 1.00 10.92 O
ATOM 5 O5' G B 43 -168.192 -31.865 33.236 1.00 10.92 O
ATOM 6 C5' G B 43 -167.991 -32.609 32.054 1.00 10.92 C
ATOM 7 C4' G B 43 -168.646 -33.962 32.142 1.00 10.92 C
ATOM 8 O4' G B 43 -168.808 -34.346 33.531 1.00 10.92 O
ATOM 9 C3' G B 43 -170.032 -34.047 31.524 1.00 10.92 C
ATOM 10 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 11 C2' G B 43 -170.962 -34.089 32.710 1.00 10.92 C
ATOM 12 O2' G B 43 -172.178 -34.763 32.450 1.00 10.92 O
ATOM 13 C1' G B 43 -170.112 -34.836 33.720 1.00 10.92 C
ATOM 14 N9 G B 43 -170.507 -34.614 35.108 1.00 10.91 N
ATOM 15 C8 G B 43 -171.546 -33.831 35.490 1.00 10.91 C
ATOM 16 N7 G B 43 -171.726 -33.787 36.768 1.00 10.91 N
ATOM 17 C5 G B 43 -170.759 -34.609 37.260 1.00 10.91 C
ATOM 18 C6 G B 43 -170.501 -34.908 38.600 1.00 10.91 C
ATOM 19 O6 G B 43 -171.099 -34.494 39.594 1.00 10.91 O
ATOM 20 N1 G B 43 -169.432 -35.771 38.705 1.00 10.91 N
ATOM 21 C2 G B 43 -168.720 -36.278 37.637 1.00 10.91 C
ATOM 22 N2 G B 43 -167.714 -37.101 37.974 1.00 10.91 N
ATOM 23 N3 G B 43 -168.954 -35.998 36.358 1.00 10.91 N
ATOM 24 C4 G B 43 -169.998 -35.152 36.255 1.00 10.91 C
ATOM 25 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 26 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 27 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 28 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
TER
ATOM 2 P A A 38 -161.906 -36.312 43.525 1.00 16.98 P
ATOM 3 OP1 A A 38 -160.436 -36.445 43.649 1.00 16.98 O
ATOM 4 OP2 A A 38 -162.589 -35.204 44.248 1.00 16.98 O
ATOM 5 O5' A A 38 -162.319 -36.300 41.991 1.00 16.98 O
ATOM 6 C5' A A 38 -161.823 -37.300 41.128 1.00 16.98 C
ATOM 7 C4' A A 38 -162.160 -37.020 39.695 1.00 16.98 C
ATOM 8 O4' A A 38 -163.594 -36.974 39.530 1.00 16.98 O
ATOM 9 C3' A A 38 -161.694 -35.693 39.140 1.00 16.98 C
ATOM 10 O3' A A 38 -160.324 -35.696 38.792 1.00 16.98 O
ATOM 11 C2' A A 38 -162.606 -35.526 37.951 1.00 16.98 C
ATOM 12 O2' A A 38 -162.178 -36.368 36.901 1.00 16.98 O
ATOM 13 C1' A A 38 -163.915 -36.076 38.503 1.00 16.98 C
ATOM 14 N9 A A 38 -164.767 -35.030 39.071 1.00 17.25 N
ATOM 15 C8 A A 38 -164.744 -34.530 40.337 1.00 17.25 C
ATOM 16 N7 A A 38 -165.656 -33.622 40.562 1.00 17.25 N
ATOM 17 C5 A A 38 -166.326 -33.557 39.366 1.00 17.25 C
ATOM 18 C6 A A 38 -167.412 -32.786 38.967 1.00 17.25 C
ATOM 19 N6 A A 38 -168.033 -31.904 39.766 1.00 17.25 N
ATOM 20 N1 A A 38 -167.829 -32.953 37.698 1.00 17.25 N
ATOM 21 C2 A A 38 -167.200 -33.837 36.913 1.00 17.25 C
ATOM 22 N3 A A 38 -166.176 -34.625 37.185 1.00 17.25 N
ATOM 23 C4 A A 38 -165.793 -34.418 38.442 1.00 17.25 C
ATOM 24 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 25 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 26 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 27 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
TER
ATOM 1 O3' C B 42 -167.645 -29.916 31.766 1.00 17.72 O
ATOM 2 P G B 43 -168.071 -30.284 33.256 1.00 10.92 P
ATOM 3 OP1 G B 43 -169.411 -29.671 33.484 1.00 10.92 O
ATOM 4 OP2 G B 43 -166.965 -29.898 34.142 1.00 10.92 O
ATOM 5 O5' G B 43 -168.192 -31.865 33.236 1.00 10.92 O
ATOM 6 C5' G B 43 -167.991 -32.609 32.054 1.00 10.92 C
ATOM 7 C4' G B 43 -168.646 -33.962 32.142 1.00 10.92 C
ATOM 8 O4' G B 43 -168.808 -34.346 33.531 1.00 10.92 O
ATOM 9 C3' G B 43 -170.032 -34.047 31.524 1.00 10.92 C
ATOM 10 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 11 C2' G B 43 -170.962 -34.089 32.710 1.00 10.92 C
ATOM 12 O2' G B 43 -172.178 -34.763 32.450 1.00 10.92 O
ATOM 13 C1' G B 43 -170.112 -34.836 33.720 1.00 10.92 C
ATOM 14 N9 G B 43 -170.507 -34.614 35.108 1.00 10.91 N
ATOM 15 C8 G B 43 -171.546 -33.831 35.490 1.00 10.91 C
ATOM 16 N7 G B 43 -171.726 -33.787 36.768 1.00 10.91 N
ATOM 17 C5 G B 43 -170.759 -34.609 37.260 1.00 10.91 C
ATOM 18 C6 G B 43 -170.501 -34.908 38.600 1.00 10.91 C
ATOM 19 O6 G B 43 -171.099 -34.494 39.594 1.00 10.91 O
ATOM 20 N1 G B 43 -169.432 -35.771 38.705 1.00 10.91 N
ATOM 21 C2 G B 43 -168.720 -36.278 37.637 1.00 10.91 C
ATOM 22 N2 G B 43 -167.714 -37.101 37.974 1.00 10.91 N
ATOM 23 N3 G B 43 -168.954 -35.998 36.358 1.00 10.91 N
ATOM 24 C4 G B 43 -169.998 -35.152 36.255 1.00 10.91 C
ATOM 25 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 26 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 27 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 28 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
TER
Atoms:
OP1: (-160.436,-36.445,43.649)
OP2: (-162.589,-35.204,44.248)
C3': (-161.694,-35.693,39.140)
C1': (-163.915,-36.076,38.503)
C5': (-161.823,-37.300,41.128)
O4': (-163.594,-36.974,39.530)
C8: (-164.744,-34.530,40.337)
O2': (-162.178,-36.368,36.901)
C6: (-167.412,-32.786,38.967)
C5: (-166.326,-33.557,39.366)
C4: (-165.793,-34.418,38.442)
P: (-161.906,-36.312,43.525)
C4': (-162.160,-37.020,39.695)
C2': (-162.606,-35.526,37.951)
C2: (-167.200,-33.837,36.913)
N1: (-167.829,-32.953,37.698)
N3: (-166.176,-34.625,37.185)
N6: (-168.033,-31.904,39.766)
N7: (-165.656,-33.622,40.562)
N9: (-164.767,-35.030,39.071)
O5': (-162.319,-36.300,41.991)
O3': (-160.324,-35.696,38.792)
OP2: (-162.589,-35.204,44.248)
C3': (-161.694,-35.693,39.140)
C1': (-163.915,-36.076,38.503)
C5': (-161.823,-37.300,41.128)
O4': (-163.594,-36.974,39.530)
C8: (-164.744,-34.530,40.337)
O2': (-162.178,-36.368,36.901)
C6: (-167.412,-32.786,38.967)
C5: (-166.326,-33.557,39.366)
C4: (-165.793,-34.418,38.442)
P: (-161.906,-36.312,43.525)
C4': (-162.160,-37.020,39.695)
C2': (-162.606,-35.526,37.951)
C2: (-167.200,-33.837,36.913)
N1: (-167.829,-32.953,37.698)
N3: (-166.176,-34.625,37.185)
N6: (-168.033,-31.904,39.766)
N7: (-165.656,-33.622,40.562)
N9: (-164.767,-35.030,39.071)
O5': (-162.319,-36.300,41.991)
O3': (-160.324,-35.696,38.792)
OP1: (-169.411,-29.671,33.484)
OP2: (-166.965,-29.898,34.142)
C3': (-170.032,-34.047,31.524)
C1': (-170.112,-34.836,33.720)
C5': (-167.991,-32.609,32.054)
O6: (-171.099,-34.494,39.594)
O4': (-168.808,-34.346,33.531)
C8: (-171.546,-33.831,35.490)
C2: (-168.720,-36.278,37.637)
C6: (-170.501,-34.908,38.600)
C5: (-170.759,-34.609,37.260)
C4: (-169.998,-35.152,36.255)
P: (-168.071,-30.284,33.256)
C4': (-168.646,-33.962,32.142)
C2': (-170.962,-34.089,32.710)
O2': (-172.178,-34.763,32.450)
N1: (-169.432,-35.771,38.705)
N2: (-167.714,-37.101,37.974)
N3: (-168.954,-35.998,36.358)
N7: (-171.726,-33.787,36.768)
N9: (-170.507,-34.614,35.108)
O5': (-168.192,-31.865,33.236)
O3': (-170.152,-35.264,30.834)
OP2: (-166.965,-29.898,34.142)
C3': (-170.032,-34.047,31.524)
C1': (-170.112,-34.836,33.720)
C5': (-167.991,-32.609,32.054)
O6: (-171.099,-34.494,39.594)
O4': (-168.808,-34.346,33.531)
C8: (-171.546,-33.831,35.490)
C2: (-168.720,-36.278,37.637)
C6: (-170.501,-34.908,38.600)
C5: (-170.759,-34.609,37.260)
C4: (-169.998,-35.152,36.255)
P: (-168.071,-30.284,33.256)
C4': (-168.646,-33.962,32.142)
C2': (-170.962,-34.089,32.710)
O2': (-172.178,-34.763,32.450)
N1: (-169.432,-35.771,38.705)
N2: (-167.714,-37.101,37.974)
N3: (-168.954,-35.998,36.358)
N7: (-171.726,-33.787,36.768)
N9: (-170.507,-34.614,35.108)
O5': (-168.192,-31.865,33.236)
O3': (-170.152,-35.264,30.834)
Image (generated by PyMOL):