ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:02744:02673

Extra

PDB:
ATOM 1 O3' U A2743 40.329 191.384 114.158 1.00 53.14 O
ATOM 2 P A A2744 38.864 190.732 114.148 1.00 52.45 P
ATOM 3 OP1 A A2744 38.241 191.069 112.844 1.00 53.79 O
ATOM 4 OP2 A A2744 38.164 191.078 115.411 1.00 54.70 O
ATOM 5 O5' A A2744 39.147 189.170 114.182 1.00 52.34 O
ATOM 6 C5' A A2744 39.803 188.523 113.084 1.00 49.36 C
ATOM 7 C4' A A2744 40.080 187.085 113.423 1.00 47.79 C
ATOM 8 O4' A A2744 41.048 187.015 114.506 1.00 47.77 O
ATOM 9 C3' A A2744 38.912 186.311 113.998 1.00 47.64 C
ATOM 10 O3' A A2744 37.923 185.923 113.059 1.00 47.78 O
ATOM 11 C2' A A2744 39.621 185.128 114.636 1.00 46.10 C
ATOM 12 O2' A A2744 40.058 184.177 113.685 1.00 43.54 O
ATOM 13 C1' A A2744 40.826 185.827 115.260 1.00 46.22 C
ATOM 14 N9 A A2744 40.559 186.184 116.654 1.00 47.28 N
ATOM 15 C8 A A2744 40.180 187.394 117.177 1.00 47.81 C
ATOM 16 N7 A A2744 39.985 187.372 118.473 1.00 47.83 N
ATOM 17 C5 A A2744 40.259 186.061 118.830 1.00 47.03 C
ATOM 18 C6 A A2744 40.225 185.388 120.065 1.00 48.34 C
ATOM 19 N6 A A2744 39.881 185.966 121.218 1.00 47.39 N
ATOM 20 N1 A A2744 40.558 184.079 120.075 1.00 49.45 N
ATOM 21 C2 A A2744 40.897 183.495 118.920 1.00 48.79 C
ATOM 22 N3 A A2744 40.962 184.019 117.699 1.00 48.08 N
ATOM 23 C4 A A2744 40.625 185.320 117.723 1.00 47.47 C
ATOM 24 P A A2745 36.439 185.614 113.586 1.00 50.27 P
ATOM 25 OP1 A A2745 35.777 184.649 112.665 1.00 48.76 O
ATOM 26 OP2 A A2745 35.793 186.923 113.866 1.00 51.22 O
ATOM 27 O5' A A2745 36.712 184.897 114.987 1.00 48.87 O
TER

ATOM 1 O3' C B2672 38.053 179.371 112.254 1.00 52.65 O
ATOM 2 P G B2673 39.587 178.923 112.421 1.00 52.55 P
ATOM 3 OP1 G B2673 40.416 179.936 111.717 1.00 54.57 O
ATOM 4 OP2 G B2673 39.722 177.487 112.059 1.00 51.97 O
ATOM 5 O5' G B2673 39.848 179.070 113.985 1.00 49.80 O
ATOM 6 C5' G B2673 39.921 180.365 114.596 1.00 48.07 C
ATOM 7 C4' G B2673 40.378 180.240 116.025 1.00 47.78 C
ATOM 8 O4' G B2673 39.324 179.662 116.843 1.00 47.22 O
ATOM 9 C3' G B2673 41.559 179.312 116.237 1.00 46.93 C
ATOM 10 O3' G B2673 42.802 179.929 115.907 1.00 47.24 O
ATOM 11 C2' G B2673 41.420 178.965 117.712 1.00 47.22 C
ATOM 12 O2' G B2673 41.881 180.018 118.539 1.00 46.50 O
ATOM 13 C1' G B2673 39.898 178.833 117.845 1.00 46.77 C
ATOM 14 N9 G B2673 39.388 177.471 117.663 1.00 46.55 N
ATOM 15 C8 G B2673 38.865 176.936 116.510 1.00 46.56 C
ATOM 16 N7 G B2673 38.465 175.701 116.651 1.00 45.87 N
ATOM 17 C5 G B2673 38.745 175.394 117.974 1.00 43.85 C
ATOM 18 C6 G B2673 38.527 174.194 118.705 1.00 43.46 C
ATOM 19 O6 G B2673 38.024 173.131 118.315 1.00 42.07 O
ATOM 20 N1 G B2673 38.960 174.312 120.019 1.00 42.81 N
ATOM 21 C2 G B2673 39.528 175.436 120.563 1.00 44.07 C
ATOM 22 N2 G B2673 39.888 175.352 121.849 1.00 43.52 N
ATOM 23 N3 G B2673 39.732 176.562 119.895 1.00 45.36 N
ATOM 24 C4 G B2673 39.320 176.471 118.615 1.00 44.87 C
ATOM 25 P C B2674 44.116 179.015 115.728 1.00 46.66 P
ATOM 26 OP1 C B2674 45.299 179.893 115.552 1.00 45.66 O
ATOM 27 OP2 C B2674 43.840 177.947 114.730 1.00 47.87 O
ATOM 28 O5' C B2674 44.243 178.333 117.150 1.00 44.40 O
TER

Atoms:
OP1: (38.241,191.069,112.844)
OP2: (38.164,191.078,115.411)
C3': (38.912,186.311,113.998)
C1': (40.826,185.827,115.260)
C5': (39.803,188.523,113.084)
O4': (41.048,187.015,114.506)
C8: (40.180,187.394,117.177)
O2': (40.058,184.177,113.685)
C6: (40.225,185.388,120.065)
C5: (40.259,186.061,118.830)
C4: (40.625,185.320,117.723)
P: (38.864,190.732,114.148)
C4': (40.080,187.085,113.423)
C2': (39.621,185.128,114.636)
C2: (40.897,183.495,118.920)
N1: (40.558,184.079,120.075)
N3: (40.962,184.019,117.699)
N6: (39.881,185.966,121.218)
N7: (39.985,187.372,118.473)
N9: (40.559,186.184,116.654)
O5': (39.147,189.170,114.182)
O3': (37.923,185.923,113.059)
OP1: (40.416,179.936,111.717)
OP2: (39.722,177.487,112.059)
C3': (41.559,179.312,116.237)
C1': (39.898,178.833,117.845)
C5': (39.921,180.365,114.596)
O6: (38.024,173.131,118.315)
O4': (39.324,179.662,116.843)
C8: (38.865,176.936,116.510)
C2: (39.528,175.436,120.563)
C6: (38.527,174.194,118.705)
C5: (38.745,175.394,117.974)
C4: (39.320,176.471,118.615)
P: (39.587,178.923,112.421)
C4': (40.378,180.240,116.025)
C2': (41.420,178.965,117.712)
O2': (41.881,180.018,118.539)
N1: (38.960,174.312,120.019)
N2: (39.888,175.352,121.849)
N3: (39.732,176.562,119.895)
N7: (38.465,175.701,116.651)
N9: (39.388,177.471,117.663)
O5': (39.848,179.070,113.985)
O3': (42.802,179.929,115.907)
Image (generated by PyMOL):
PyMOL image
show in jmol