Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A38:A48
Extra
PDB:
ATOM 1 O3' A A 37 -12.606 10.054 -9.541 1.00 46.66 O
ATOM 2 P A A 38 -14.168 10.126 -9.900 1.00 49.52 P
ATOM 3 OP1 A A 38 -14.878 9.560 -8.726 1.00 49.90 O
ATOM 4 OP2 A A 38 -14.354 9.572 -11.271 1.00 48.44 O
ATOM 5 O5' A A 38 -14.533 11.683 -9.967 1.00 49.05 O
ATOM 6 C5' A A 38 -14.346 12.537 -8.839 1.00 47.94 C
ATOM 7 C4' A A 38 -14.342 13.975 -9.312 1.00 47.23 C
ATOM 8 O4' A A 38 -13.243 14.193 -10.234 1.00 45.79 O
ATOM 9 C3' A A 38 -15.557 14.349 -10.144 1.00 47.65 C
ATOM 10 O3' A A 38 -16.653 14.667 -9.315 1.00 49.12 O
ATOM 11 C2' A A 38 -15.044 15.568 -10.894 1.00 46.54 C
ATOM 12 O2' A A 38 -15.020 16.732 -10.081 1.00 47.88 O
ATOM 13 C1' A A 38 -13.634 15.095 -11.252 1.00 44.15 C
ATOM 14 N9 A A 38 -13.559 14.445 -12.562 1.00 40.94 N
ATOM 15 C8 A A 38 -13.520 13.108 -12.848 1.00 40.18 C
ATOM 16 N7 A A 38 -13.468 12.839 -14.143 1.00 38.98 N
ATOM 17 C5 A A 38 -13.470 14.082 -14.741 1.00 37.17 C
ATOM 18 C6 A A 38 -13.429 14.495 -16.085 1.00 36.04 C
ATOM 19 N6 A A 38 -13.369 13.662 -17.123 1.00 35.16 N
ATOM 20 N1 A A 38 -13.458 15.813 -16.344 1.00 36.09 N
ATOM 21 C2 A A 38 -13.519 16.667 -15.318 1.00 37.88 C
ATOM 22 N3 A A 38 -13.564 16.398 -14.011 1.00 38.50 N
ATOM 23 C4 A A 38 -13.533 15.076 -13.787 1.00 38.72 C
ATOM 24 P C A 39 -18.122 14.247 -9.779 1.00 49.90 P
ATOM 25 OP1 C A 39 -19.003 14.591 -8.638 1.00 50.69 O
ATOM 26 OP2 C A 39 -18.080 12.854 -10.278 1.00 49.24 O
ATOM 27 O5' C A 39 -18.422 15.214 -11.022 1.00 48.24 O
TER
ATOM 1 O3' G B 47 -14.532 18.605 -20.599 1.00 35.97 O
ATOM 2 P G B 48 -15.105 20.104 -20.518 1.00 38.82 P
ATOM 3 OP1 G B 48 -16.570 20.038 -20.725 1.00 39.27 O
ATOM 4 OP2 G B 48 -14.259 20.992 -21.359 1.00 37.27 O
ATOM 5 O5' G B 48 -14.889 20.456 -18.977 1.00 37.45 O
ATOM 6 C5' G B 48 -15.714 19.783 -18.050 1.00 36.56 C
ATOM 7 C4' G B 48 -15.166 20.007 -16.664 1.00 36.80 C
ATOM 8 O4' G B 48 -13.745 19.757 -16.657 1.00 35.94 O
ATOM 9 C3' G B 48 -15.228 21.442 -16.185 1.00 37.01 C
ATOM 10 O3' G B 48 -16.527 21.743 -15.728 1.00 40.16 O
ATOM 11 C2' G B 48 -14.258 21.379 -15.025 1.00 34.57 C
ATOM 12 O2' G B 48 -14.811 20.727 -13.908 1.00 34.64 O
ATOM 13 C1' G B 48 -13.163 20.530 -15.632 1.00 33.04 C
ATOM 14 N9 G B 48 -12.121 21.360 -16.210 1.00 29.90 N
ATOM 15 C8 G B 48 -11.837 21.575 -17.535 1.00 28.63 C
ATOM 16 N7 G B 48 -10.822 22.381 -17.707 1.00 27.64 N
ATOM 17 C5 G B 48 -10.430 22.714 -16.421 1.00 26.81 C
ATOM 18 C6 G B 48 -9.388 23.538 -15.968 1.00 26.76 C
ATOM 19 O6 G B 48 -8.583 24.166 -16.656 1.00 28.43 O
ATOM 20 N1 G B 48 -9.316 23.600 -14.578 1.00 27.05 N
ATOM 21 C2 G B 48 -10.164 22.928 -13.723 1.00 27.80 C
ATOM 22 N2 G B 48 -9.975 23.077 -12.401 1.00 27.39 N
ATOM 23 N3 G B 48 -11.146 22.145 -14.144 1.00 27.85 N
ATOM 24 C4 G B 48 -11.214 22.090 -15.494 1.00 27.81 C
ATOM 25 P G B 49 -17.103 23.220 -15.890 1.00 41.56 P
ATOM 26 OP1 G B 49 -18.438 23.167 -15.252 1.00 42.71 O
ATOM 27 OP2 G B 49 -16.939 23.662 -17.296 1.00 39.24 O
ATOM 28 O5' G B 49 -16.155 24.099 -14.947 1.00 41.44 O
TER
ATOM 2 P A A 38 -14.168 10.126 -9.900 1.00 49.52 P
ATOM 3 OP1 A A 38 -14.878 9.560 -8.726 1.00 49.90 O
ATOM 4 OP2 A A 38 -14.354 9.572 -11.271 1.00 48.44 O
ATOM 5 O5' A A 38 -14.533 11.683 -9.967 1.00 49.05 O
ATOM 6 C5' A A 38 -14.346 12.537 -8.839 1.00 47.94 C
ATOM 7 C4' A A 38 -14.342 13.975 -9.312 1.00 47.23 C
ATOM 8 O4' A A 38 -13.243 14.193 -10.234 1.00 45.79 O
ATOM 9 C3' A A 38 -15.557 14.349 -10.144 1.00 47.65 C
ATOM 10 O3' A A 38 -16.653 14.667 -9.315 1.00 49.12 O
ATOM 11 C2' A A 38 -15.044 15.568 -10.894 1.00 46.54 C
ATOM 12 O2' A A 38 -15.020 16.732 -10.081 1.00 47.88 O
ATOM 13 C1' A A 38 -13.634 15.095 -11.252 1.00 44.15 C
ATOM 14 N9 A A 38 -13.559 14.445 -12.562 1.00 40.94 N
ATOM 15 C8 A A 38 -13.520 13.108 -12.848 1.00 40.18 C
ATOM 16 N7 A A 38 -13.468 12.839 -14.143 1.00 38.98 N
ATOM 17 C5 A A 38 -13.470 14.082 -14.741 1.00 37.17 C
ATOM 18 C6 A A 38 -13.429 14.495 -16.085 1.00 36.04 C
ATOM 19 N6 A A 38 -13.369 13.662 -17.123 1.00 35.16 N
ATOM 20 N1 A A 38 -13.458 15.813 -16.344 1.00 36.09 N
ATOM 21 C2 A A 38 -13.519 16.667 -15.318 1.00 37.88 C
ATOM 22 N3 A A 38 -13.564 16.398 -14.011 1.00 38.50 N
ATOM 23 C4 A A 38 -13.533 15.076 -13.787 1.00 38.72 C
ATOM 24 P C A 39 -18.122 14.247 -9.779 1.00 49.90 P
ATOM 25 OP1 C A 39 -19.003 14.591 -8.638 1.00 50.69 O
ATOM 26 OP2 C A 39 -18.080 12.854 -10.278 1.00 49.24 O
ATOM 27 O5' C A 39 -18.422 15.214 -11.022 1.00 48.24 O
TER
ATOM 1 O3' G B 47 -14.532 18.605 -20.599 1.00 35.97 O
ATOM 2 P G B 48 -15.105 20.104 -20.518 1.00 38.82 P
ATOM 3 OP1 G B 48 -16.570 20.038 -20.725 1.00 39.27 O
ATOM 4 OP2 G B 48 -14.259 20.992 -21.359 1.00 37.27 O
ATOM 5 O5' G B 48 -14.889 20.456 -18.977 1.00 37.45 O
ATOM 6 C5' G B 48 -15.714 19.783 -18.050 1.00 36.56 C
ATOM 7 C4' G B 48 -15.166 20.007 -16.664 1.00 36.80 C
ATOM 8 O4' G B 48 -13.745 19.757 -16.657 1.00 35.94 O
ATOM 9 C3' G B 48 -15.228 21.442 -16.185 1.00 37.01 C
ATOM 10 O3' G B 48 -16.527 21.743 -15.728 1.00 40.16 O
ATOM 11 C2' G B 48 -14.258 21.379 -15.025 1.00 34.57 C
ATOM 12 O2' G B 48 -14.811 20.727 -13.908 1.00 34.64 O
ATOM 13 C1' G B 48 -13.163 20.530 -15.632 1.00 33.04 C
ATOM 14 N9 G B 48 -12.121 21.360 -16.210 1.00 29.90 N
ATOM 15 C8 G B 48 -11.837 21.575 -17.535 1.00 28.63 C
ATOM 16 N7 G B 48 -10.822 22.381 -17.707 1.00 27.64 N
ATOM 17 C5 G B 48 -10.430 22.714 -16.421 1.00 26.81 C
ATOM 18 C6 G B 48 -9.388 23.538 -15.968 1.00 26.76 C
ATOM 19 O6 G B 48 -8.583 24.166 -16.656 1.00 28.43 O
ATOM 20 N1 G B 48 -9.316 23.600 -14.578 1.00 27.05 N
ATOM 21 C2 G B 48 -10.164 22.928 -13.723 1.00 27.80 C
ATOM 22 N2 G B 48 -9.975 23.077 -12.401 1.00 27.39 N
ATOM 23 N3 G B 48 -11.146 22.145 -14.144 1.00 27.85 N
ATOM 24 C4 G B 48 -11.214 22.090 -15.494 1.00 27.81 C
ATOM 25 P G B 49 -17.103 23.220 -15.890 1.00 41.56 P
ATOM 26 OP1 G B 49 -18.438 23.167 -15.252 1.00 42.71 O
ATOM 27 OP2 G B 49 -16.939 23.662 -17.296 1.00 39.24 O
ATOM 28 O5' G B 49 -16.155 24.099 -14.947 1.00 41.44 O
TER
Atoms:
OP1: (-14.878,9.560,-8.726)
OP2: (-14.354,9.572,-11.271)
C3': (-15.557,14.349,-10.144)
C1': (-13.634,15.095,-11.252)
C5': (-14.346,12.537,-8.839)
O4': (-13.243,14.193,-10.234)
C8: (-13.520,13.108,-12.848)
O2': (-15.020,16.732,-10.081)
C6: (-13.429,14.495,-16.085)
C5: (-13.470,14.082,-14.741)
C4: (-13.533,15.076,-13.787)
P: (-14.168,10.126,-9.900)
C4': (-14.342,13.975,-9.312)
C2': (-15.044,15.568,-10.894)
C2: (-13.519,16.667,-15.318)
N1: (-13.458,15.813,-16.344)
N3: (-13.564,16.398,-14.011)
N6: (-13.369,13.662,-17.123)
N7: (-13.468,12.839,-14.143)
N9: (-13.559,14.445,-12.562)
O5': (-14.533,11.683,-9.967)
O3': (-16.653,14.667,-9.315)
OP2: (-14.354,9.572,-11.271)
C3': (-15.557,14.349,-10.144)
C1': (-13.634,15.095,-11.252)
C5': (-14.346,12.537,-8.839)
O4': (-13.243,14.193,-10.234)
C8: (-13.520,13.108,-12.848)
O2': (-15.020,16.732,-10.081)
C6: (-13.429,14.495,-16.085)
C5: (-13.470,14.082,-14.741)
C4: (-13.533,15.076,-13.787)
P: (-14.168,10.126,-9.900)
C4': (-14.342,13.975,-9.312)
C2': (-15.044,15.568,-10.894)
C2: (-13.519,16.667,-15.318)
N1: (-13.458,15.813,-16.344)
N3: (-13.564,16.398,-14.011)
N6: (-13.369,13.662,-17.123)
N7: (-13.468,12.839,-14.143)
N9: (-13.559,14.445,-12.562)
O5': (-14.533,11.683,-9.967)
O3': (-16.653,14.667,-9.315)
OP1: (-16.570,20.038,-20.725)
OP2: (-14.259,20.992,-21.359)
C3': (-15.228,21.442,-16.185)
C1': (-13.163,20.530,-15.632)
C5': (-15.714,19.783,-18.050)
O6: (-8.583,24.166,-16.656)
O4': (-13.745,19.757,-16.657)
C8: (-11.837,21.575,-17.535)
C2: (-10.164,22.928,-13.723)
C6: (-9.388,23.538,-15.968)
C5: (-10.430,22.714,-16.421)
C4: (-11.214,22.090,-15.494)
P: (-15.105,20.104,-20.518)
C4': (-15.166,20.007,-16.664)
C2': (-14.258,21.379,-15.025)
O2': (-14.811,20.727,-13.908)
N1: (-9.316,23.600,-14.578)
N2: (-9.975,23.077,-12.401)
N3: (-11.146,22.145,-14.144)
N7: (-10.822,22.381,-17.707)
N9: (-12.121,21.360,-16.210)
O5': (-14.889,20.456,-18.977)
O3': (-16.527,21.743,-15.728)
OP2: (-14.259,20.992,-21.359)
C3': (-15.228,21.442,-16.185)
C1': (-13.163,20.530,-15.632)
C5': (-15.714,19.783,-18.050)
O6: (-8.583,24.166,-16.656)
O4': (-13.745,19.757,-16.657)
C8: (-11.837,21.575,-17.535)
C2: (-10.164,22.928,-13.723)
C6: (-9.388,23.538,-15.968)
C5: (-10.430,22.714,-16.421)
C4: (-11.214,22.090,-15.494)
P: (-15.105,20.104,-20.518)
C4': (-15.166,20.007,-16.664)
C2': (-14.258,21.379,-15.025)
O2': (-14.811,20.727,-13.908)
N1: (-9.316,23.600,-14.578)
N2: (-9.975,23.077,-12.401)
N3: (-11.146,22.145,-14.144)
N7: (-10.822,22.381,-17.707)
N9: (-12.121,21.360,-16.210)
O5': (-14.889,20.456,-18.977)
O3': (-16.527,21.743,-15.728)
Image (generated by PyMOL):