Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0165:0758
Extra
PDB:
ATOM 1 O3' U A 164 66.588 115.308 47.381 1.00 28.17 O
ATOM 2 P A A 165 66.962 116.803 46.948 1.00 30.53 P
ATOM 3 OP1 A A 165 65.701 117.492 46.531 1.00 25.34 O
ATOM 4 OP2 A A 165 68.114 116.718 46.000 1.00 28.91 O
ATOM 5 O5' A A 165 67.470 117.466 48.303 1.00 27.73 O
ATOM 6 C5' A A 165 66.550 117.764 49.359 1.00 25.15 C
ATOM 7 C4' A A 165 67.275 118.410 50.509 1.00 26.73 C
ATOM 8 O4' A A 165 68.265 117.484 51.023 1.00 26.98 O
ATOM 9 C3' A A 165 68.093 119.647 50.179 1.00 25.97 C
ATOM 10 O3' A A 165 67.283 120.813 50.092 1.00 26.22 O
ATOM 11 C2' A A 165 69.068 119.695 51.348 1.00 25.98 C
ATOM 12 O2' A A 165 68.491 120.197 52.532 1.00 27.45 O
ATOM 13 C1' A A 165 69.353 118.210 51.561 1.00 24.01 C
ATOM 14 N9 A A 165 70.581 117.722 50.946 1.00 24.16 N
ATOM 15 C8 A A 165 70.731 116.966 49.813 1.00 23.97 C
ATOM 16 N7 A A 165 71.974 116.623 49.566 1.00 24.52 N
ATOM 17 C5 A A 165 72.690 117.207 50.597 1.00 24.70 C
ATOM 18 C6 A A 165 74.051 117.205 50.917 1.00 25.40 C
ATOM 19 N6 A A 165 74.977 116.561 50.210 1.00 28.31 N
ATOM 20 N1 A A 165 74.440 117.895 52.010 1.00 26.89 N
ATOM 21 C2 A A 165 73.508 118.537 52.729 1.00 26.35 C
ATOM 22 N3 A A 165 72.197 118.603 52.536 1.00 25.54 N
ATOM 23 C4 A A 165 71.847 117.906 51.442 1.00 25.87 C
ATOM 24 P U A 166 67.535 121.869 48.907 1.00 27.11 P
ATOM 25 OP1 U A 166 66.569 122.974 49.109 1.00 25.89 O
ATOM 26 OP2 U A 166 67.571 121.173 47.608 1.00 23.71 O
ATOM 27 O5' U A 166 69.016 122.378 49.189 1.00 27.80 O
TER
ATOM 1 O3' C B 757 78.199 118.565 58.250 1.00 24.83 O
ATOM 2 P G B 758 78.801 119.962 57.730 1.00 27.64 P
ATOM 3 OP1 G B 758 80.075 119.614 57.046 1.00 26.80 O
ATOM 4 OP2 G B 758 78.804 120.968 58.827 1.00 25.94 O
ATOM 5 O5' G B 758 77.742 120.463 56.653 1.00 24.36 O
ATOM 6 C5' G B 758 77.611 119.814 55.385 1.00 22.74 C
ATOM 7 C4' G B 758 76.641 120.577 54.525 1.00 25.61 C
ATOM 8 O4' G B 758 75.373 120.693 55.225 1.00 25.93 O
ATOM 9 C3' G B 758 77.022 122.016 54.238 1.00 25.44 C
ATOM 10 O3' G B 758 77.922 122.094 53.145 1.00 28.59 O
ATOM 11 C2' G B 758 75.676 122.647 53.918 1.00 26.32 C
ATOM 12 O2' G B 758 75.223 122.320 52.618 1.00 26.39 O
ATOM 13 C1' G B 758 74.776 121.948 54.935 1.00 24.72 C
ATOM 14 N9 G B 758 74.592 122.662 56.198 1.00 23.85 N
ATOM 15 C8 G B 758 75.207 122.375 57.392 1.00 22.97 C
ATOM 16 N7 G B 758 74.781 123.117 58.378 1.00 23.63 N
ATOM 17 C5 G B 758 73.846 123.959 57.802 1.00 20.83 C
ATOM 18 C6 G B 758 73.042 124.957 58.392 1.00 23.31 C
ATOM 19 O6 G B 758 72.982 125.297 59.584 1.00 22.89 O
ATOM 20 N1 G B 758 72.237 125.585 57.450 1.00 24.53 N
ATOM 21 C2 G B 758 72.205 125.280 56.112 1.00 25.03 C
ATOM 22 N2 G B 758 71.356 126.012 55.369 1.00 24.08 N
ATOM 23 N3 G B 758 72.947 124.333 55.549 1.00 19.31 N
ATOM 24 C4 G B 758 73.736 123.717 56.449 1.00 20.70 C
ATOM 25 P G B 759 78.994 123.293 53.076 1.00 30.44 P
ATOM 26 OP1 G B 759 79.894 122.963 51.935 1.00 29.53 O
ATOM 27 OP2 G B 759 79.576 123.518 54.434 1.00 27.24 O
ATOM 28 O5' G B 759 78.112 124.571 52.709 1.00 27.94 O
TER
ATOM 2 P A A 165 66.962 116.803 46.948 1.00 30.53 P
ATOM 3 OP1 A A 165 65.701 117.492 46.531 1.00 25.34 O
ATOM 4 OP2 A A 165 68.114 116.718 46.000 1.00 28.91 O
ATOM 5 O5' A A 165 67.470 117.466 48.303 1.00 27.73 O
ATOM 6 C5' A A 165 66.550 117.764 49.359 1.00 25.15 C
ATOM 7 C4' A A 165 67.275 118.410 50.509 1.00 26.73 C
ATOM 8 O4' A A 165 68.265 117.484 51.023 1.00 26.98 O
ATOM 9 C3' A A 165 68.093 119.647 50.179 1.00 25.97 C
ATOM 10 O3' A A 165 67.283 120.813 50.092 1.00 26.22 O
ATOM 11 C2' A A 165 69.068 119.695 51.348 1.00 25.98 C
ATOM 12 O2' A A 165 68.491 120.197 52.532 1.00 27.45 O
ATOM 13 C1' A A 165 69.353 118.210 51.561 1.00 24.01 C
ATOM 14 N9 A A 165 70.581 117.722 50.946 1.00 24.16 N
ATOM 15 C8 A A 165 70.731 116.966 49.813 1.00 23.97 C
ATOM 16 N7 A A 165 71.974 116.623 49.566 1.00 24.52 N
ATOM 17 C5 A A 165 72.690 117.207 50.597 1.00 24.70 C
ATOM 18 C6 A A 165 74.051 117.205 50.917 1.00 25.40 C
ATOM 19 N6 A A 165 74.977 116.561 50.210 1.00 28.31 N
ATOM 20 N1 A A 165 74.440 117.895 52.010 1.00 26.89 N
ATOM 21 C2 A A 165 73.508 118.537 52.729 1.00 26.35 C
ATOM 22 N3 A A 165 72.197 118.603 52.536 1.00 25.54 N
ATOM 23 C4 A A 165 71.847 117.906 51.442 1.00 25.87 C
ATOM 24 P U A 166 67.535 121.869 48.907 1.00 27.11 P
ATOM 25 OP1 U A 166 66.569 122.974 49.109 1.00 25.89 O
ATOM 26 OP2 U A 166 67.571 121.173 47.608 1.00 23.71 O
ATOM 27 O5' U A 166 69.016 122.378 49.189 1.00 27.80 O
TER
ATOM 1 O3' C B 757 78.199 118.565 58.250 1.00 24.83 O
ATOM 2 P G B 758 78.801 119.962 57.730 1.00 27.64 P
ATOM 3 OP1 G B 758 80.075 119.614 57.046 1.00 26.80 O
ATOM 4 OP2 G B 758 78.804 120.968 58.827 1.00 25.94 O
ATOM 5 O5' G B 758 77.742 120.463 56.653 1.00 24.36 O
ATOM 6 C5' G B 758 77.611 119.814 55.385 1.00 22.74 C
ATOM 7 C4' G B 758 76.641 120.577 54.525 1.00 25.61 C
ATOM 8 O4' G B 758 75.373 120.693 55.225 1.00 25.93 O
ATOM 9 C3' G B 758 77.022 122.016 54.238 1.00 25.44 C
ATOM 10 O3' G B 758 77.922 122.094 53.145 1.00 28.59 O
ATOM 11 C2' G B 758 75.676 122.647 53.918 1.00 26.32 C
ATOM 12 O2' G B 758 75.223 122.320 52.618 1.00 26.39 O
ATOM 13 C1' G B 758 74.776 121.948 54.935 1.00 24.72 C
ATOM 14 N9 G B 758 74.592 122.662 56.198 1.00 23.85 N
ATOM 15 C8 G B 758 75.207 122.375 57.392 1.00 22.97 C
ATOM 16 N7 G B 758 74.781 123.117 58.378 1.00 23.63 N
ATOM 17 C5 G B 758 73.846 123.959 57.802 1.00 20.83 C
ATOM 18 C6 G B 758 73.042 124.957 58.392 1.00 23.31 C
ATOM 19 O6 G B 758 72.982 125.297 59.584 1.00 22.89 O
ATOM 20 N1 G B 758 72.237 125.585 57.450 1.00 24.53 N
ATOM 21 C2 G B 758 72.205 125.280 56.112 1.00 25.03 C
ATOM 22 N2 G B 758 71.356 126.012 55.369 1.00 24.08 N
ATOM 23 N3 G B 758 72.947 124.333 55.549 1.00 19.31 N
ATOM 24 C4 G B 758 73.736 123.717 56.449 1.00 20.70 C
ATOM 25 P G B 759 78.994 123.293 53.076 1.00 30.44 P
ATOM 26 OP1 G B 759 79.894 122.963 51.935 1.00 29.53 O
ATOM 27 OP2 G B 759 79.576 123.518 54.434 1.00 27.24 O
ATOM 28 O5' G B 759 78.112 124.571 52.709 1.00 27.94 O
TER
Atoms:
OP1: (65.701,117.492,46.531)
OP2: (68.114,116.718,46.000)
C3': (68.093,119.647,50.179)
C1': (69.353,118.210,51.561)
C5': (66.550,117.764,49.359)
O4': (68.265,117.484,51.023)
C8: (70.731,116.966,49.813)
O2': (68.491,120.197,52.532)
C6: (74.051,117.205,50.917)
C5: (72.690,117.207,50.597)
C4: (71.847,117.906,51.442)
P: (66.962,116.803,46.948)
C4': (67.275,118.410,50.509)
C2': (69.068,119.695,51.348)
C2: (73.508,118.537,52.729)
N1: (74.440,117.895,52.010)
N3: (72.197,118.603,52.536)
N6: (74.977,116.561,50.210)
N7: (71.974,116.623,49.566)
N9: (70.581,117.722,50.946)
O5': (67.470,117.466,48.303)
O3': (67.283,120.813,50.092)
OP2: (68.114,116.718,46.000)
C3': (68.093,119.647,50.179)
C1': (69.353,118.210,51.561)
C5': (66.550,117.764,49.359)
O4': (68.265,117.484,51.023)
C8: (70.731,116.966,49.813)
O2': (68.491,120.197,52.532)
C6: (74.051,117.205,50.917)
C5: (72.690,117.207,50.597)
C4: (71.847,117.906,51.442)
P: (66.962,116.803,46.948)
C4': (67.275,118.410,50.509)
C2': (69.068,119.695,51.348)
C2: (73.508,118.537,52.729)
N1: (74.440,117.895,52.010)
N3: (72.197,118.603,52.536)
N6: (74.977,116.561,50.210)
N7: (71.974,116.623,49.566)
N9: (70.581,117.722,50.946)
O5': (67.470,117.466,48.303)
O3': (67.283,120.813,50.092)
OP1: (80.075,119.614,57.046)
OP2: (78.804,120.968,58.827)
C3': (77.022,122.016,54.238)
C1': (74.776,121.948,54.935)
C5': (77.611,119.814,55.385)
O6: (72.982,125.297,59.584)
O4': (75.373,120.693,55.225)
C8: (75.207,122.375,57.392)
C2: (72.205,125.280,56.112)
C6: (73.042,124.957,58.392)
C5: (73.846,123.959,57.802)
C4: (73.736,123.717,56.449)
P: (78.801,119.962,57.730)
C4': (76.641,120.577,54.525)
C2': (75.676,122.647,53.918)
O2': (75.223,122.320,52.618)
N1: (72.237,125.585,57.450)
N2: (71.356,126.012,55.369)
N3: (72.947,124.333,55.549)
N7: (74.781,123.117,58.378)
N9: (74.592,122.662,56.198)
O5': (77.742,120.463,56.653)
O3': (77.922,122.094,53.145)
OP2: (78.804,120.968,58.827)
C3': (77.022,122.016,54.238)
C1': (74.776,121.948,54.935)
C5': (77.611,119.814,55.385)
O6: (72.982,125.297,59.584)
O4': (75.373,120.693,55.225)
C8: (75.207,122.375,57.392)
C2: (72.205,125.280,56.112)
C6: (73.042,124.957,58.392)
C5: (73.846,123.959,57.802)
C4: (73.736,123.717,56.449)
P: (78.801,119.962,57.730)
C4': (76.641,120.577,54.525)
C2': (75.676,122.647,53.918)
O2': (75.223,122.320,52.618)
N1: (72.237,125.585,57.450)
N2: (71.356,126.012,55.369)
N3: (72.947,124.333,55.549)
N7: (74.781,123.117,58.378)
N9: (74.592,122.662,56.198)
O5': (77.742,120.463,56.653)
O3': (77.922,122.094,53.145)
Image (generated by PyMOL):